KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:24 2014 Check: 00 .. Name: ENSP00000231173/1-787 Len: 796 Check: 2515 Weight: 1.00 Name: ENSBTAP00000048796/1-794 Len: 796 Check: 4174 Weight: 1.00 Name: bmy_12380T0/1-519 Len: 796 Check: 1775 Weight: 1.00 Name: BACU015966/1-793 Len: 796 Check: 6206 Weight: 1.00 // 1 50 ENSP00000231173/1-787 MEPAGERFPE QRQVLILLLL LEVTLAGWEP RRYSVMEETE RGSFVANLAN ENSBTAP00000048796/1-794 --AGVERFRQ QRQVLILFLL LGVTFAGWES RRYSVMEEIE SGSFVANLVK bmy_12380T0/1-519 MEAGGERFPK QRQVLILFLL LGVALAGWES RRYFVMEETE SGSFVANLAE BACU015966/1-793 MEAGGERFPK QRQVLILFLL LGVALAGWES RRYFVMEETE SGSFVANLAK 51 100 ENSP00000231173/1-787 DLGLGVGELA ERGARVVSED NEQGLQLDLQ TGQLILNEKL DREKLCGPTE ENSBTAP00000048796/1-794 DLGLGVGELA AREARVVSED NEPRLQLDLQ TGKLTLNEKL DREEMCGPTD bmy_12380T0/1-519 DLGLGVGELA AREARVVSED NEPWLQLDLQ TGELILSEKL DREEMCGPTD BACU015966/1-793 DLGLGVGELA AREARVVSED NEPWLQLDLQ TGELILSEKL DREEMCGPTD 101 150 ENSP00000231173/1-787 PCIMHFQVLL KKPLEVFRAE LLVTDINDHS PEFPEREMTL KIPETSSLGT ENSBTAP00000048796/1-794 PCVMHFQVLL KKPLGVFRAE LLVRDINDHA PEFPEREMTL KIPENSPPGT bmy_12380T0/1-519 PCVMHFQVLL KKPLGVFRAE LLVRDINDHS PEFPEKEMTL KILETSPPGT BACU015966/1-793 PCVMHFQVLL KKPLGVFRAE LLVRDINDHS PEFPEKEMTL KILETSPPGT 151 200 ENSP00000231173/1-787 VFPLKKARDL DVGSNNVQNY NISPNSHFHV STRTRGDGRK YPELVLDTEL ENSBTAP00000048796/1-794 VFPLKKAQDL DVGNNNIQNY SISPNSYFHV STRNRGDGRK YPELVLDREL bmy_12380T0/1-519 VFPLKTAQDL DVGNNNIQNY SISHNSYFHV STRNWGDGRK YPELVLDKEL BACU015966/1-793 VFPLKTAQDL DVGNNNIQNY NISHNSCFHV STRNWGDGRK YPELVLDKEL 201 250 ENSP00000231173/1-787 DREEQAELRL TLTAVDGGSP PRSGTVQILI LVLDANDNAP EFVQALYEVQ ENSBTAP00000048796/1-794 DREKQALLRL TLTALDGGSP PRSGTTQVRI LVLDINDNAP EFAQAHYQVQ bmy_12380T0/1-519 DREEQAELRL TLTALDGGSP PRSGTAQVRI LVLDVNDNAP EFAQTHYQVQ BACU015966/1-793 DREEQAELRL TLTALDGGSP PRSGTAQVRI LVLDVNDNAP EFAQTHYQVQ 251 300 ENSP00000231173/1-787 VPENSPVGSL VVKVSARDLD TGTNGEISYS LYYSSQEIDK PFELSSLSGE ENSBTAP00000048796/1-794 VLENSPVGAL VVKVSARDLD TGTNGEVSYS LFYSSQEMSP TFELNSLSGE bmy_12380T0/1-519 VPENSPVGTL VVKVSARDLD TGTNGEISYS LFYSSQEIST TFELSSISGE BACU015966/1-793 VPENSPVGTL VVKVSARDLD TGTNGEISYS LFYSSQEIST TFELSSISGE 301 350 ENSP00000231173/1-787 IRLIKKLDFE TMSSYDLDIE ASDGGGLSGK CSVSVKVLDV NDNFPELSIS ENSBTAP00000048796/1-794 VRLIKKLDFE TVSSYDLDID AFDGGGLSGK CSVSIEVVDV NDNAPELTIS bmy_12380T0/1-519 VRLIKKLDFE TISSYELYID ASDGGGLSGK CSVSIEVMDV NDNSPELTIS BACU015966/1-793 VRLIKKLDFE TISSYELYID ASDGGGLSGK CSVSIEVMDV NDNSPELTIS 351 400 ENSP00000231173/1-787 SLTSPIPENS PETEVALFRI RDRDSGENGK MICSIQDDVP FKLKPSVENF ENSBTAP00000048796/1-794 SLTSPIPENS PETEVALFRI RDRDSGENGK MTCSIQDDLP FILKPSEENF bmy_12380T0/1-519 SLTSPIPENS PETEVALFRI RDRDSGDNGR MTCSIQDDLP FLLKPSAENF BACU015966/1-793 SLTSPIPENS PETEVALFRI RDRDSGDNGR MTCSIQDDLP FLLKPSAENF 401 450 ENSP00000231173/1-787 YRLVTEGALD RETRAEYNIT ITITDLGTPR LKTEQSITVL VSDVNDNAPA ENSBTAP00000048796/1-794 YTLVTNGALD RESKAEYNVT ITVTDLGTPR LKTEHNIIVL VSDVNDNAPA bmy_12380T0/1-519 YTLVTNGALD RESKAQYNIT ITVTDMGTPR LKTEHNITVL VSDVNDNAPA BACU015966/1-793 YTLVTNGALD RESKAQYNIT ITVTDMGTPR LKTQHNITVL VSDVNDNAPA 451 500 ENSP00000231173/1-787 FTQTSYTLFV RENNSPALHI GSVSATDRDS GTNAQVTYSL LPPRDPHLPL ENSBTAP00000048796/1-794 FTQTSYTLWV RENNSPALHI GSVSATDTDA GANAQVTYSL LPPPDPLVPL bmy_12380T0/1-519 FTQTSYTL-- ---------- -SCKVTQRRT RGRRR----- LKP------- BACU015966/1-793 FTQTSYTLSV RENNSPALHI GTVRATDRDA GANAQVSYSL LPPLDPHVPL 501 550 ENSP00000231173/1-787 TSLVSINTDN GHLFALQSLD YEALQAFEFR VGATDRGFPA LSSEALVRVL ENSBTAP00000048796/1-794 ASLVSINPDN GHLFALTSLD YEALRAFEFR VGATDRGSPA LSSQALVRVL bmy_12380T0/1-519 ------NAQS GH-------N WRCL------ -GSTESCCPH SP-------- BACU015966/1-793 ASLVSINPDN GHLFALRSLD YEALRAFEFR VGAADRGSPA LSSQALVRVL 551 600 ENSP00000231173/1-787 VLDANDNSPF VLYPLQNGSA PCTELVPRAA EPGYLVTKVV AVDGDSGQNA ENSBTAP00000048796/1-794 VADANDNAPF VLYPLQNASA PCTELVPRAA EPGYLVTKVV AVDGDAGQNA bmy_12380T0/1-519 --DVEDHPSF I--------- ---------- ---------- ---------- BACU015966/1-793 VADDNDNAPF VLYPLQNASA PCTELVPRAA EAGYLVTKVV AVDGDSGQNA 601 650 ENSP00000231173/1-787 WLSYQLLKAT EPGLFGVWAH NGEVRTARLL SERDVAKHRL VVLVKDNGEP ENSBTAP00000048796/1-794 WLSYQLLKAT EPGLFGVWAH NGEVRTARLL SERDAPKQRL VVLVKDNGEP bmy_12380T0/1-519 ---------- -SGVRSISSH TAAV------ ---------- ---------- BACU015966/1-793 WLSFQLLKAT EPGLFGVWAH NGEVRTARLL SERDAAKHRL VVLVKDNGEP 651 700 ENSP00000231173/1-787 PRSATATLQV LLVDGFSQPY LPLPEA-APA QAQADSLTVY LVVALASVSS ENSBTAP00000048796/1-794 PLSASVTLHV LLVDGFSQPY LPAPEAEAAA AAPADPLTVY LVVALASVSS bmy_12380T0/1-519 ---------- ---------- ---------- ---------- ---------- BACU015966/1-793 PLSASVTLHV LLVDGFSQPY LPAPEAEAAD AAPAAPLTVY LVVALASVSS 701 750 ENSP00000231173/1-787 LFLFSVFLFV AVRLCRRSRA ASVGRCSVPE GPFPGHLVDV SGTGTLSQSY ENSBTAP00000048796/1-794 LFLFSVLVFV AVRLCRRGGA ASAGRCPVAE GHFPGHLVDV SGTGTLSQSY bmy_12380T0/1-519 ---------- ---------- ---------- ---------- ---------- BACU015966/1-793 LFLFSVLVFV AVRLCRRGGA ASVGRCSVPE GPFPGHLVDV SGTGTLSQSY 751 800 ENSP00000231173/1-787 QYEVCLTGGS ESNDFKFLKP IFPNIVSQDS RRKSEFLE-- ------ ENSBTAP00000048796/1-794 QYEVCLTGGT GTNEFKFLKP VLPSILESNF ERKSEGSPTL QNRLGI bmy_12380T0/1-519 ---------- ---------- ---------- ---------- ------ BACU015966/1-793 QYEVCLTGGS GSNEFKFLKP VFHNILESDL GRKSEGSSTF QNS---