KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:25 2014 Check: 00 .. Name: ENSP00000270861/1-970 Len: 978 Check: 632 Weight: 1.00 Name: ENSBTAP00000048808/1-893 Len: 978 Check: 1600 Weight: 1.00 Name: ENSTTRP00000012315/1-973 Len: 978 Check: 3940 Weight: 1.00 Name: bmy_09262T0/1-892 Len: 978 Check: 4855 Weight: 1.00 Name: BACU004187/1-971 Len: 978 Check: 6268 Weight: 1.00 // 1 50 ENSP00000270861/1-970 ----MATCIG EKIEDFKVGN LLGKGSFAGV YRAESIHTGL EVAIKMIDKK ENSBTAP00000048808/1-893 ----MATCIG EKIEDFRVGN LLGKGSFAGV YRAESIHTGL EVAIKMIDKK ENSTTRP00000012315/1-973 ----MATCIG EKIEDFKVGN LLGKGSFAGV YRAESIHTGL EVAIKMIDKK bmy_09262T0/1-892 MLSTPDTCC- --IEDFKVGN LLGKGSFAGV YRAESIHTGL EVAIKMIDKK BACU004187/1-971 ----MATCIG EKIEDFKVGN LLGKGSFAGV YRAESIHTGL EVAIKMIDKK 51 100 ENSP00000270861/1-970 AMYKAGMVQR VQNEVKIHCQ LKHPSILELY NYFEDSNYVY LVLEMCHNGE ENSBTAP00000048808/1-893 AMYKAGMVQR VQNEVKIHCQ LKHPSILELY NYFEDNNYVY LVLEMCHNGE ENSTTRP00000012315/1-973 AMYKAGMVQR VQNEVKIHCQ LKHPSILELY NYFEDNNYVY LVLEMCHNGE bmy_09262T0/1-892 AMYKAGMVQR VQNEVKIHCQ LKHPSILELY NYFEDNNYVY LVLEMCHNGE BACU004187/1-971 AMYKAGMVQR VQNEVKIHCQ LKHPSILELY NYFEDNNYVY LVLEMCHNGE 101 150 ENSP00000270861/1-970 MNRYLKNRVK PFSENEARHF MHQIITGMLY LHSHGILHRD LTLSNLLLTR ENSBTAP00000048808/1-893 MNRYLKNRRK PFSENEARHF MHQIITGMLY LHSHGILHRD LTLSNLLLTR ENSTTRP00000012315/1-973 MNRYIKNRRK PFSENEARHF MHQIITGMLY LHSHGILHRD LTLSNLLLTR bmy_09262T0/1-892 MNRYLKNRRK PFSENEARHF MHQIITGMLY LHSHGILHRD LTLSNLLLTR BACU004187/1-971 MNRYLKNRRK PFSENEARHF MHQIITGMLY LHSHGILHRD LTLSNLLLTR 151 200 ENSP00000270861/1-970 NMNIKIADFG LATQLKMPHE KHYTLCGTPN YISPEIATRS AHGLESDVWS ENSBTAP00000048808/1-893 NMNIKIADFG LAAQLKMPHE KHYTLCGTPN YISPEIATRS AHGLESDIWS ENSTTRP00000012315/1-973 NMNIKIADFG LATQLKMPHE KHYTLCGTPN YISPEIATRS AHGLESDIWS bmy_09262T0/1-892 NMNIKIADFG LATQLKMPHE KHYTLCGTPN YISPEIATRS AHGLESDIWS BACU004187/1-971 NMNIKIADFG LATQLKMPHE KHYTLCGTPN YISPEIATRS AHGLESDIWS 201 250 ENSP00000270861/1-970 LGCMFYTLLI GRPPFDTDTV KNTLNKVVLA DYEMPSFLSI EAKDLIHQLL ENSBTAP00000048808/1-893 LGCMFYTLLI GRPPFDTDTV KNTLNKVVLA DYEMPTFLSR EAKDLIHQLL ENSTTRP00000012315/1-973 LGCMFYTLLI GRPPFDTDTI KNTLNKVVLA DYEMPTFLSR EAKDLIHQLL bmy_09262T0/1-892 LGCMFYTLLI GRPPFDTDTI KNTLNKVVLA DYEMPTFLSR EAKDLIHQLL BACU004187/1-971 LGCMFYTLLI GRPPFDTDTI KNTLNKVVLA DYEMPTFLSR EAKDLIHQLL 251 300 ENSP00000270861/1-970 RRNPADRLSL SSVLDHPFMS RNSSTKSKDL GTVEDSIDSG HATISTAITA ENSBTAP00000048808/1-893 RRNPADRLSL SSVLDHPFMS RNSSKKSKDL GTVEDSIDSG HATISTAITA ENSTTRP00000012315/1-973 RRNPADRLSL SSVLDHPFMS RNSSTKSKDL GTVEDSIDSG HATISTAITA bmy_09262T0/1-892 RRNPADRLSL SSVLDHPFMS RNSSTKSKDL GTVEDSIDSG HATISTAITA BACU004187/1-971 RRNPADRLSL SSVLDHPFMS RNSSTKSKDL GTVEDSIDSG HATISTAITA 301 350 ENSP00000270861/1-970 SSSTSISGSL FDKRRLLIGQ PLPNKMTVFP KNKSSTDFSS SGDGNSFYTQ ENSBTAP00000048808/1-893 SSSTSISGSL FDRRRLLIEQ PLPNKMTIFP KNKNPSDFSS SGDGISFYTS ENSTTRP00000012315/1-973 SSSTSMSGSL FDRRRLLIDQ PLPNKMTIFP KNKNSSDFSS SGDGSSLYTQ bmy_09262T0/1-892 SSSTSMSGSL FDRRRLLIDQ PLPNKMTIFP KNKNSSDFSS SGDGSSLYTQ BACU004187/1-971 SSSTSMSGSL FDRRRLLVDQ PLPNKMTIFP KNKNSSDFSS SGDGSSLYTQ 351 400 ENSP00000270861/1-970 WGN--QETSN SGRGRVIQDA EERPHSRYLR RAYSSDRSGT SNSQSQAKTY ENSBTAP00000048808/1-893 WGNQEQETSN SGRGRVIQEA EERPHSRYLR RAHSSDRSET SHGQSRVKTY ENSTTRP00000012315/1-973 WGNQEQETSN SGRGRAIQEA EERPHSRYLR RAHSSDRSGI SNSQSRAKTY bmy_09262T0/1-892 WGNQEQETSN SGRGRAVQEA EERPHSRYLR RAHSSDRSGI SNSQSRAKMY BACU004187/1-971 WGNQEQETSN SGRGRAIQEA EERPHSRYLR RAHSSDRSGI SNSQSRAKTY 401 450 ENSP00000270861/1-970 TMERCHSAEM LSVSKRSGGG ENEERYSPTD NNANIFNFFK EKTSSSSGSF ENSBTAP00000048808/1-893 TMERCYSAEM LSKSKRSGVE EN-ERYSPTN NDANIFHFFK EKTSNSSGSF ENSTTRP00000012315/1-973 PMERCYSAEM LSKSKRSGVD ENEERYSSTN SNANILHFFK EKTSNGSGSF bmy_09262T0/1-892 TMERSYSAEM LSKSKRSGVD ENEERYSSTN SNANILHFLK EKTSNGSGSF BACU004187/1-971 TMERCYSAEM LSKSKRSGVD ENEERYSSTN SNTNILHFFK EKTSNGSGSF 451 500 ENSP00000270861/1-970 ERPDNNQALS NHLCP--GKT PFPFADPTPQ TETVQQWFGN LQINAHLRKT ENSBTAP00000048808/1-893 EGPDNNQALS NHLCP--GKT PFPFPEQTPQ TEMVQQWFGN LQIN------ ENSTTRP00000012315/1-973 ERPDNNQALX NHLCPKNGKT PFPFPDQTAQ TEMVQQWFGN LQINAHLRET bmy_09262T0/1-892 ERPDNNQALS NHLCP--GKT PFPFPDQTAQ TEMVQQWFGN LQINAHLRET BACU004187/1-971 ERPDNNQALS NHLCP--GKT PFPFPDQTAQ TEMVQQWFGN LQINAHLRET 501 550 ENSP00000270861/1-970 TEYDSISPNR DFQGHPDLQK DTSKNAWTDT KVKKNSDASD NAHSVKQQNT ENSBTAP00000048808/1-893 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012315/1-973 TECNSISPNR DFQGHPDLQ- DTTRNAWTDI RAKKSPDASD NAHSAKQLNN bmy_09262T0/1-892 TERNSISPNR DFQGHPDLQ- DTSRNAWTDI RAKKSPDASD NAHSAKQLNT BACU004187/1-971 TERNSISPNR DFQGHPDLQ- DTSRNAWADI RAKKSPDASD NAHSAKQLNT 551 600 ENSP00000270861/1-970 MKYMTALHSK PEIIQQECVF GSDPLSEQSK TRGMEPPWGY QNRTLRSITS ENSBTAP00000048808/1-893 ---------- ---------- --DPSCEQSK TRGVEPPLVY QKRTLRSITS ENSTTRP00000012315/1-973 MKYMTAFHSK PEIIQQESIF GLDPSSEQSK TRGVEPLLGY QKHTLRSITS bmy_09262T0/1-892 MKCMTAFHSK PEIIQQESIF GLDPSSEQSK TRGMEPPLGY QKHTLRSITS BACU004187/1-971 MKYMTAFHRK PEIIQQESIF GLDPSSEQSK ARGVEPPLGY QKHTLRSVTS 601 650 ENSP00000270861/1-970 PLVAHRLKPI RQKTKKAVVS ILDSEEVCVE LVKEYASQEY VKEVLQISSD ENSBTAP00000048808/1-893 PLTAYRLKPI RQKTKKAVVS ILDSEEVCVE LLKDYASQEY VKEVLQISSD ENSTTRP00000012315/1-973 PLTAYRLKPI RQKTKKAVVS ILDSEEVCVE LLKEYASQEY VKEVLHISSD bmy_09262T0/1-892 PLTAYRLKPI RQKTKKAVVS ILDSEEVCVE LLKEYASXEY VKEVLQISSD BACU004187/1-971 PLTAYRLKPI RQKTKKAVVS ILDSEEVCVE LLKEYASQEY VKEVLQISSD 651 700 ENSP00000270861/1-970 GNTITIYYPN GGRGFPLADR PPSPTDNISR YSFDNLPEKY WRKYQYASRF ENSBTAP00000048808/1-893 GSMITIYYPN DGRGFLLADR PPSPTDNISR YSFDNLPEKY WRKYQYASRF ENSTTRP00000012315/1-973 GNMITIYYPN DGRGFPLADR PPSPTDNISR YSFDNLPXXY WRKYQYASRF bmy_09262T0/1-892 GNMITIYYPN DGRGFPLADR PPSPTDNISR YSFDNLPEKY WRKYQYASRF BACU004187/1-971 GNMITIYYPN DGRGFPLADR PPSPTDNISR YSFDNLPEKY WRKYQYASRF 701 750 ENSP00000270861/1-970 VQLVRSKSPK ITYFTRYAKC ILMENSPGAD FEVWFYDGVK IHKTEDFIQV ENSBTAP00000048808/1-893 VQLVRSKSPK ITYFTRYAKC VLMENSPGAD FEVWFYDGAK IHKTEDLIQV ENSTTRP00000012315/1-973 VQLVRSKSPK ITYFTRYAKC VLMENSPGAD FEVWFYDGAK IHKTEDLIQV bmy_09262T0/1-892 VQLVRSKSPK ITYFTRYAKC VLMENSPGAD FEVWFYDGAK IHKTEDLIQV BACU004187/1-971 VQLVRSKSPK ITYFTRYAKC VLMENSPGAD FEVWFYDGAK IHKTEDLIQV 751 800 ENSP00000270861/1-970 IEKTGKSYTL KSESEVNSLK EEIKMYMDHA NEGHRICLAL ESIISEEERK ENSBTAP00000048808/1-893 IEKTGRSYTL KGESEVNSLK EEVKMYMNHA NEGHRICLAL ESIISEEEKK ENSTTRP00000012315/1-973 IEKTGKSYTL KGESEVNSLK EEIKMYMNHA NEGHRICLAL ESIISEEEKK bmy_09262T0/1-892 IEKTGKSYTL KGESEVNSLK DEIKMYMNHA NE-------- ---------- BACU004187/1-971 IEKTGKSYTL KGESEVNSLK EEIKMYMNQA NEGHRICLVL ESIISEEEKK 801 850 ENSP00000270861/1-970 TRSAPFFPII IGRKPGSTSS PKALSPPPSV DSNYPTRERA SFNRMVMHSA ENSBTAP00000048808/1-893 SGSAPFFPII VGRRPSSTSS PKALTPPPPV DPNYPMRETP SLNRMIINSA ENSTTRP00000012315/1-973 SGSAPFFPII VGRKPSSTSS PKALTPPPSV DPNYPMRETP SLNRMIINSA bmy_09262T0/1-892 ---------- ---------- ---------- ---------- ---------- BACU004187/1-971 SGSAPFFPII VGRKPSSTSS PKAFTPPPSV DPNYPIRETP SLNRMIINSA 851 900 ENSP00000270861/1-970 ASPTQAPILN PSMVTNEGLG LTTTASGTDI SSNSLKDCLP KSAQLLKSVF ENSBTAP00000048808/1-893 ASPKQAPVLN PPVVTNEGLG LMGAASETNS SPRSLKDCLP KSAQLLKSVF ENSTTRP00000012315/1-973 ASPKQAPILN PSMVTNEGLG LAGAASGTNS SPSSLKDCLP KSAQLFKSVF bmy_09262T0/1-892 ---------- --MVTNEGLG LAGAASGTNS SPSSLKDCLP KSAQLFKSVF BACU004187/1-971 ASPKQAPILN PSMVTNEGLG LAGAASGTNS SPSSLKDCLP KSAQLFKSVF 901 950 ENSP00000270861/1-970 VKNVGWATQL TSGAVWVQFN DGSQLVVQAG VSSISYTSPN GQTTRYGENE ENSBTAP00000048808/1-893 VKNVGWATQL TSGAVWVQFN DGSQLVVQAG VSSISYTSPD GQTTRYGENE ENSTTRP00000012315/1-973 VKNVGWATQL TSGAVWVQFN DGSQLVVQAG VSSISYTSPD GQTTRYGENE bmy_09262T0/1-892 VKNVGWATQL TSGAVWVQFN DGSQLVVQAG VSSISYTSPD GHTSRYGENE BACU004187/1-971 VKNVGWATQL TSGAVWVQFN DGSQLVVQAG VSSISYTSPD GQTSRYGENE 951 1000 ENSP00000270861/1-970 KLPDYIKQKL QCLSSILLMF SNPTPNFH ENSBTAP00000048808/1-893 KLPEYIKQKL QCLSSILLMF SNPTPSFH ENSTTRP00000012315/1-973 KLPEYIRQKL QCLSSILLMF SNSTPSLH bmy_09262T0/1-892 KLPEYIRQKL QCLSSILLMF SNPTPSLH BACU004187/1-971 KLPEYIRQKL QCLSSILLMF SNPTPSFH