KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:28 2014 Check: 00 .. Name: BACU015031/1-415 Len: 469 Check: 8614 Weight: 1.00 Name: bmy_21101T0/1-331 Len: 469 Check: 6483 Weight: 1.00 Name: ENSP00000328708/1-469 Len: 469 Check: 8209 Weight: 1.00 Name: ENSBTAP00000048885/1-468 Len: 469 Check: 8978 Weight: 1.00 // 1 50 BACU015031/1-415 ---------- -MNKAAGGDE LAELFSLIPD LPQVTNTSGN ASLQLQDLSW bmy_21101T0/1-331 ---------- ---------- ---------- ---------- ---------- ENSP00000328708/1-469 MQMADAATIA TMNKAAGGDK LAELFSLVPD LLEAANTSGN ASLQLPDLWW ENSBTAP00000048885/1-468 -QVAAAAVPA TMNKAAGGDE LTELFDRIPD LLQAANFSGN ASLQLQDLWW 51 100 BACU015031/1-415 ELGLELPAGA APGHPPGGGE AESADTEARV RTLISVVYWV LCALGLTGNL bmy_21101T0/1-331 ---------- ---------- ---------- ---------- ---------- ENSP00000328708/1-469 ELGLELPDGA PPGHPPGSGG AESADTEARV RILISVVYWV VCALGLAGNL ENSBTAP00000048885/1-468 ELGLELPDGA APGHPPSGGG AESADPEARV RILVSVVYWV VCALGLTGNL 101 150 BACU015031/1-415 LVLYLMKSKQ GWRQSSINLF VTNLALTDFQ FVLTLPFWAV ENSLDFRWPS bmy_21101T0/1-331 -----MMSKQ GWRKSSINLF VTNLALTDFQ FV-------- ---LDFKWPF ENSP00000328708/1-469 LVLYLMKSMQ GWRKSSINLF VTNLALTDFQ FVLTLPFWAV ENALDFKWPF ENSBTAP00000048885/1-468 LVLYLMKSKQ GWRKSSINLF VTNLALTDFQ FVLTLPFWAV ENALDFKWPF 151 200 BACU015031/1-415 GKATCKIVST VTSMNMHASV FFLTSMSVAR YPRWPWLLRA TGPEGTAGAT bmy_21101T0/1-331 GKVMCKIVST VTSMNMYASV FFLTSMSVAR YHSVALALKS HRTQGHGWGD ENSP00000328708/1-469 GKAMCKIVSM VTSMNMYASV FFLTAMSVTR YHSVASALKS HRTRGHGRGD ENSBTAP00000048885/1-468 GKAMCKIVSI VTSMNMYASV FFLTSMSVAR YHSVASALKS HRTRGYGRGD 201 250 BACU015031/1-415 AAAGAWGTAA ASRPKH-CSS GWA------- -----STTCR RCCWAPC--- bmy_21101T0/1-331 CCGRSLGDSC RFSAKALCVL IWASAALASL PKAIFSTTIK VMGEELCLVR ENSP00000328708/1-469 CCGRSLGDSC CFSAKALCVW IWALAALASL PSAIFSTTVK VMGEELCLVR ENSBTAP00000048885/1-468 CCGRSLEDSC CFSVKALCAM IWASAALASL PNAIFSTTVK VMGEELCLVR 251 300 BACU015031/1-415 ---------- RRWAS----- ---------- --ISLCYPLL VRFTCDHRVA bmy_21101T0/1-331 FPDKLLGRDR QFRLGLYHLQ KVLLGFVPPL GIISLCYLLL VRFISDHRVA ENSP00000328708/1-469 FPDKLLGRDR QFWLGLYHSQ KVLLGFVLPL GIIILCYLLL VRFIADRRAA ENSBTAP00000048885/1-468 FPDSLLGRDR QFWLGLYHLQ KVLLGFVLPL GIISLCYLLL VRFISDHRVS 301 350 BACU015031/1-415 GTEVGASAAG GGLARASARR RSKATKSVTI VGLSFVLCWL PHQALATWSI bmy_21101T0/1-331 GTEVGASAAG GGLARASAQR RSKATKSVTI VVLYFFLCWL PHQALTTWSI ENSP00000328708/1-469 GTKGGAAVAG GRPTGASARR LSKVTKSVTI VVLSFFLCWL PNQALTTWSI ENSBTAP00000048885/1-468 GTEGGASAAG GGLAGASARR RSKVTKSVTI VVLSFFLCWL PNQALTTWSI 351 400 BACU015031/1-415 LIELNAVPFS QEYFLCQVYA FPVSGCLAHS NSRLNPILYC LVRREFRKAL bmy_21101T0/1-331 LIEFNAVPFS QEYFLCRVYV FPVSVCLAHS NSCLNPILYC LVRREFRKAL ENSP00000328708/1-469 LIKFNAVPFS QEYFLCQVYA FPVSVCLAHS NSCLNPVLYC LVRREFRKAL ENSBTAP00000048885/1-468 LIKFNAVPFS QEYFLCQVYA FPVSVCLAHS NSCLNPILYC LVRREFRKAL 401 450 BACU015031/1-415 ENLLWRLASP SLASMRPFAA ATKPEPEAQG RQALAPLHQA AEPDMLYYPP bmy_21101T0/1-331 ENLLWRLASP SLTSMRPFAA ATKPEPEARG TQEL------ --------PS ENSP00000328708/1-469 KSLLWRIASP SITSMRPFTA TTKPEHEDQG LQAPAPPHAA AEPDLLYYPP ENSBTAP00000048885/1-468 KNLLWRIASP SLTSMRPFTA TTKPEPEDQG LQALAPLHQA AEPDLLYYPP 451 500 BACU015031/1-415 GVVVYSGGRY DLLPNSSAY bmy_21101T0/1-331 GLPSAEKSRA D-------- ENSP00000328708/1-469 GVVVYSGGRY DLLPSSSAY ENSBTAP00000048885/1-468 GVVVYSGGRY DLLPSSSVY