KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:31 2014 Check: 00 .. Name: ENSTTRP00000003246/1-695 Len: 698 Check: 7492 Weight: 1.00 Name: ENSP00000384708/1-695 Len: 698 Check: 1648 Weight: 1.00 Name: BACU013879/1-520 Len: 698 Check: 7043 Weight: 1.00 Name: ENSBTAP00000048971/1-695 Len: 698 Check: 453 Weight: 1.00 Name: bmy_15478T0/1-600 Len: 698 Check: 3694 Weight: 1.00 // 1 50 ENSTTRP00000003246/1-695 MALLLVALLT FLSLGAGCHH RICHCSNRVL LCQESKVTEI PSDLPRNAVE ENSP00000384708/1-695 MALLLVSLLA FLSLGSGCHH RICHCSNRVF LCQESKVTEI PSDLPRNAIE BACU013879/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048971/1-695 MALLLVALLA FLSLGSGCHH RLCHCSNGVF LCQESKVTEI PSDLPRDAVE bmy_15478T0/1-600 ---------- ---------- --LHCP---- VLPDAPVIWN KTLLFRTLIS 51 100 ENSTTRP00000003246/1-695 L---RFVLTK LQVIPKGAFS GFGDLEKIEI SQNDVLEVIE ANVFSNLPKL ENSP00000384708/1-695 L---RFVLTK LRVIQKGAFS GFGDLEKIEI SQNDVLEVIE ADVFSNLPKL BACU013879/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048971/1-695 L---RFVLTK LRVIPKGAFS GFGDLEKIEI SQNDVLEVIE ANVFSNLPKL bmy_15478T0/1-600 PQHRRFVLTK LQVIPKGAFS GFGDLEKIEI SQNDVLEVIE ANVFSNLPKL 101 150 ENSTTRP00000003246/1-695 HEIRIEKANN LLYIDPDAFQ NLPNLRYLXX XXXXXXXXXX XXXXXXXXXX ENSP00000384708/1-695 HEIRIEKANN LLYINPEAFQ NLPNLQYLLI SNTGIKHLPD VHKIHSLQKV BACU013879/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000048971/1-695 HEIRIEKANN LLYIDADAFQ NLPNLRYLLI SNTGIKHLPA VHKIQSLQKV bmy_15478T0/1-600 HEIRIEKANN LLYIDPDAFQ NLPNLRY--- ---------- ---------- 151 200 ENSTTRP00000003246/1-695 XXDIQDNINI HTVERNSFVG LSFESMILWL SKNGIQEIHN CAFNGTQLDE ENSP00000384708/1-695 LLDIQDNINI HTIERNSFVG LSFESVILWL NKNGIQEIHN CAFNGTQLDE BACU013879/1-520 ---------- ---------- --------WL SKNGIQQIHN CAFNGTQLDE ENSBTAP00000048971/1-695 LLDIQDNINI HTVERNSFMG LSFESMTVWL SKNGIQEIHN CAFNGTQLDE bmy_15478T0/1-600 -LDIQDNINI HTVERNSFVG LSFESM---- ---------- ---------- 201 250 ENSTTRP00000003246/1-695 LNLSDNNNLE ELPNDVFQGA SGPVILDISR TRIHSLPSYG LGNLKKLRAK ENSP00000384708/1-695 LNLSDNNNLE ELPNDVFHGA SGPVILDISR TRIHSLPSYG LENLKKLRAR BACU013879/1-520 LNLSDNNNLE ELPNDVFQGA SGPVILDISR TRIHSLPSYG LGSLKKLRAK ENSBTAP00000048971/1-695 LNLSDNSNLE ELPNDVFQGA SGPVILDISR TRIRSLPSYG LENLKKLRAK bmy_15478T0/1-600 ---------- ---------- ----ILDISR TRIHSLPSYG LGNLKKLRAK 251 300 ENSTTRP00000003246/1-695 STYNLKKLPS LEAFVTLVEA SLTYPSHCCI FANWRRQISD LHPICNKSIL ENSP00000384708/1-695 STYNLKKLPT LEKLVALMEA SLTYPSHCCA FANWRRQISE LHPICNKSIL BACU013879/1-520 STYNLKKLPS LEAFVTIVEA SLTYPSHCCI FANWRRQISD LHPICNKSIL ENSBTAP00000048971/1-695 STYRLKKLPS LEKFVTLVEA SLTYPSHCCA FANWRRQTSD LHPVCNKSIL bmy_15478T0/1-600 STYNLKKLPS LEAFVTIVEA SLTYPSHCCI FANWRRQISD LHPICNKSIL 301 350 ENSTTRP00000003246/1-695 RQEVDDMTQA RGQRVSLAED DESSYAKGXX XXXXXXXXXX XXXXXXXXXX ENSP00000384708/1-695 RQEVDYMTQA RGQRSSLAED NESSYSRGFD MTYTEFDYDL CNEVVDVTCS BACU013879/1-520 RQEVDDTTQA RGQRVSLAED DESSYAKGFD MMYSEFDYDL CNEVVDVTCS ENSBTAP00000048971/1-695 RQEVDDMTQA RGQRVSLAED DEPSYAKGFD VMYSEFDYDL CNEVVDVTCS bmy_15478T0/1-600 RQEVDDMTQA RGQRVSLAED NESSYAKGFD MMYSEFDYDL CNEVVDVTCS 351 400 ENSTTRP00000003246/1-695 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000384708/1-695 PKPDAFNPCE DIMGYNILRV LIWFISILAI TGNIIVLVIL TTSQYKLTVP BACU013879/1-520 PEPDAFNPCE DIMGYDILRV LIWFISILAI TGNTLVLMVL ITSQYKLTVP ENSBTAP00000048971/1-695 PEPDAFNPCE DIMGDDILRV LIWFISILAI TGNILVLVIL ITSQYKLTVP bmy_15478T0/1-600 PEPDAFNPCE DIMGYDILRV LIWFISILAI TGNTLVLLVL ITSQYKLTVP 401 450 ENSTTRP00000003246/1-695 XXXXXXXXXX XXXXXXXXXX IASVDIHTKS QYHNYAIDWQ TGAGCDAAGF ENSP00000384708/1-695 RFLMCNLAFA DLCIGIYLLL IASVDIHTKS QYHNYAIDWQ TGAGCDAAGF BACU013879/1-520 RFLMCNLAFA DLCIGIYLLL IASVDIHTKS QYHNYAIDWQ TGAGCDAAGF ENSBTAP00000048971/1-695 RFLMCNLAFA DLCIGIYLLL IASVDVHTKS QYHNYAIDWQ TGAGCDAAGF bmy_15478T0/1-600 RFLMCNLAFA DLCIGIYLLL IASVDIHTKS QYHNYAIDWQ TGAGCDAAGF 451 500 ENSTTRP00000003246/1-695 FTVFASELSV YTLTAITLER WHTITHAMQL ERKVQLHHAA SVMLVGWIFA ENSP00000384708/1-695 FTVFASELSV YTLTAITLER WHTITHAMQL DCKVQLRHAA SVMVMGWIFA BACU013879/1-520 FTVFASELSV YTLTAITLER WHTITHAMQL ERKVQLRHAT SVMLVGWIFA ENSBTAP00000048971/1-695 FTVFASELSV YTLTAITLER WHTITHAMQL ECKVQLRHAA SIMLVGWIFA bmy_15478T0/1-600 FTVFASELSV YTLTAITLER WHTITHAMQL ERKVQLRHAT SVMLVGWIFA 501 550 ENSTTRP00000003246/1-695 CAVALFPIFG ISSYMKVSIC LPMDIDSPLS QLYVMSLLVL NVLAFVVICG ENSP00000384708/1-695 FAAALFPIFG ISSYMKVSIC LPMDIDSPLS QLYVMSLLVL NVLAFVVICG BACU013879/1-520 FAVALFPIFG ISSYMKVSIC LPMDIDSPLS QLYVMSLLVL NVLAFVVIWG ENSBTAP00000048971/1-695 FAVALFPIFG ISSYMKVSIC LPMDIDSPLS QLYVMSLLVL NVLAFVVICG bmy_15478T0/1-600 FAVALFPIFG ISSYMKVSIC LPMDIDSPLS QLYVMSLLVL NVLAFVVICG 551 600 ENSTTRP00000003246/1-695 CYTHIYLTVR NPNITSSSSD TKIAKRMAML IFTDFLCMAP ISFFAISASL ENSP00000384708/1-695 CYIHIYLTVR NPNIVSSSSD TRIAKRMAML IFTDFLCMAP ISFFAISASL BACU013879/1-520 CYTHIYLTVR NPNITSSSSD TKIAKRMAML IFTDFLCMAP ISFFAISASL ENSBTAP00000048971/1-695 CYTHIYLTVR NPNITSSSSD TKIAKRMAML IFTDFLCMAP ISFFAISASL bmy_15478T0/1-600 CYTHIYLTVR NPNITSSSSD TKIAKRMAML IFTDFLCMAP ISFFAISASL 601 650 ENSTTRP00000003246/1-695 KVPLITVSKS KILLVLFYPI NSCANPFLYA IFTKNFRRDF FILLSKFGCY ENSP00000384708/1-695 KVPLITVSKA KILLVLFHPI NSCANPFLYA IFTKNFRRDF FILLSKCGCY BACU013879/1-520 KVPLITVSKS KILLVLFYPI NSCANPFLYA VFTKNFRRDF FILLSKFGCY ENSBTAP00000048971/1-695 KVPLITVSKS KILLVLFYPI NSCANPFLYA IFTKNFRRDF FILLSKFGCY bmy_15478T0/1-600 KVPLITVSKS KILLVLFYPI NSCANPFLYA IFTKNFRRDF FILLSKFGCY 651 700 ENSTTRP00000003246/1-695 EMQAQTYRTE TSSTAHNFHP RNGHCPPVAR VTNGSNYTLI PLSHLAQN ENSP00000384708/1-695 EMQAQIYRTE TSSTVHNTHP RNGHCSSAPR VTSGSTYILV PLSHLAQN BACU013879/1-520 EMQAQTYRTE TSSTAHNFHP RNGHCPPAPR VTNGSNYTLI PLSHLAQN ENSBTAP00000048971/1-695 EVQAQTYRSE TSSTAHNFHP RNGHCPPAPR VTNGSNYTLI PLRHLAKN bmy_15478T0/1-600 EMQAQTYRTE ASSTAHNFHP RNGHCPPAPR VTNDSNYTLI PLSHLAQN