KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:33 2014 Check: 00 .. Name: ENSP00000215368/1-213 Len: 213 Check: 7822 Weight: 1.00 Name: ENSTTRP00000010450/1-165 Len: 213 Check: 9551 Weight: 1.00 Name: ENSBTAP00000049002/1-213 Len: 213 Check: 7756 Weight: 1.00 Name: bmy_06667T0/1-166 Len: 213 Check: 3812 Weight: 1.00 Name: BACU006519/1-190 Len: 213 Check: 2601 Weight: 1.00 // 1 50 ENSP00000215368/1-213 MAPAQRPLLP LLLLLLPLPP PPFARAEDAA RANSDRYAVY WNRSNPRFHA ENSTTRP00000010450/1-165 ---------- ---------- ---------- ---------- -------LHT ENSBTAP00000049002/1-213 MAPAQRPLLP LLLLLLPLPP PPFAHGEDAA RANSDRYAVY WNRSNPRFHA bmy_06667T0/1-166 ---------- ---------- ---------- ---------- -------FHA BACU006519/1-190 MADVQRNAGS TEARVRALHR PALG------ ---------- -------FHA 51 100 ENSP00000215368/1-213 GAGDDGGGYT VEVSINDYLD IYCPHYGAPL PPAERMEHYV LYMVNGEGHA ENSTTRP00000010450/1-165 -AKEDGGGYT VEVSINDYLD IYCPHYGAPL PPAERMEHYV LYMVNGEGHA ENSBTAP00000049002/1-213 GAADDGGGYT VEVSINDYLD IYCPHYGAPL PPAERMEHYV LYMVNGEGHA bmy_06667T0/1-166 GAADDGGGYT VEVSINDYLD IYCPHYGAPL PPAERMERYV LYMVNGEGHA BACU006519/1-190 GAADDGGGYT VEVSINDYLD IYCPHYGAPL PPAERMEHYV LYMVNGEGHA 101 150 ENSP00000215368/1-213 SCDHRQRGFK RWECNRPAAP GGPLKFSEKF QLFTPFSLGF EFRPGHEYYY ENSTTRP00000010450/1-165 SCDHRQRGFK RWECNRPAAP GGPLKFSEKF QLFTPFSLGF EFRPGHEYYY ENSBTAP00000049002/1-213 SCDHRQRGFK RWECNRPAAP GGPLKFSEKF QLFTPFSLGF EFRPGHEYYY bmy_06667T0/1-166 SCDHRQRGFK RWECNRPAAP GGPLKFSEKF QLFTPFSLGF EFRPGHEYYY BACU006519/1-190 SCDHRQRGFK RWECNRPAAP GGPLKFSEKF QLFTPFSLGF EFRPGHEYYY 151 200 ENSP00000215368/1-213 ISATPPNAVD RPCLRLKVYV RPTNETLYEA PEPIFTSNNS CSSPGGCRLF ENSTTRP00000010450/1-165 ISATPPNAVD RPCLRLKVYV RPTNETLYEA PEPIFTSNNS CSGLRSCQLF ENSBTAP00000049002/1-213 ISATPPNAVD RPCLRLKVYV RPTNETLYEA PEPIFTSNNS CSGLGSCQLF bmy_06667T0/1-166 ISATPPNAVD RPCLRLKVYV RPTNETLYEA PEPIFTSNNS CSGLRSCQLF BACU006519/1-190 ISATPPNAVD RPCLRLKVYV RPTNETLYEA PEPIFTSNNS CSGLRSCQLF 201 250 ENSP00000215368/1-213 LSTIPVLWTL LGS ENSTTRP00000010450/1-165 LSTVPVLWTL LGS ENSBTAP00000049002/1-213 LSTVPVLWTL LGS bmy_06667T0/1-166 LSTVPVLWTL LGS BACU006519/1-190 LSTVPVLWTL LGS