KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:34 2014 Check: 00 .. Name: ENSP00000274054/1-494 Len: 514 Check: 258 Weight: 1.00 Name: ENSBTAP00000049022/1-360 Len: 514 Check: 7613 Weight: 1.00 Name: bmy_14903T0/1-319 Len: 514 Check: 711 Weight: 1.00 Name: BACU010642/1-387 Len: 514 Check: 5342 Weight: 1.00 Name: ENSTTRP00000009599/1-451 Len: 514 Check: 3259 Weight: 1.00 // 1 50 ENSP00000274054/1-494 MEVVEAAAAQ LETLKFNGTD FGVGEGPAAP SPGSAPVPGT QPPLQSFEGS ENSBTAP00000049022/1-360 MEVVEASAAQ LQTLKFGGAG VGIGQEVAAP APGPAPVAAP PAD----QGA bmy_14903T0/1-319 ---------- ---------- ---------- ---------- ---------- BACU010642/1-387 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009599/1-451 MEVVEAVAAQ LQTLKFGGAG VGVDQGLAVP APDPAS--QH RAD----EVA 51 100 ENSP00000274054/1-494 PDAGQTVEVK PAGEQPLQPV LNAVAAGTPA PQPQPPAESP ACGDCVTSPG ENSBTAP00000049022/1-360 PE-------- ---------- ----SAGEPS PQLLPPSLPG PPLEGS---- bmy_14903T0/1-319 ---------- ---------- ---------- -MVF------ SCVQTI---- BACU010642/1-387 ---------- ---------- ---------- -MLL------ YCFQCF---- ENSTTRP00000009599/1-451 PD-------- ---------- ----LVGEQP PQLA------ DVLESH---- 101 150 ENSP00000274054/1-494 AAEPARAPDS LETSDSDSDS DSETDSDSSS SSSSSSSSSS SSSSSCISLP ENSBTAP00000049022/1-360 -------GLE TSDSDSDSDS DSDSETDSDS SSSSSSSSSS SSSSSRMSLP bmy_14903T0/1-319 ---------- ---------- ---------- ---------- ---------- BACU010642/1-387 ---------- ---------- LLYSETDSDS SSSSSSSSSS SSSSSPISLP ENSTTRP00000009599/1-451 -------PGG PETSDSDSDS YSYSETDSDS SSSSSSSSSS SSSSSRISLP 151 200 ENSP00000274054/1-494 PVLSDGDDDL QIEKENKNFP LKTKDEL-LL NELPSVEELT IILPEDIELK ENSBTAP00000049022/1-360 PVLSDGEDDL LVEKENKNFP LKTKDEL-LL SELPSVEELT IVLPEDIELK bmy_14903T0/1-319 ---------L KCE------- --TREVLECI QELPSAEEVT IVLPEGIELK BACU010642/1-387 AVLSDGDDDL QVEKENKNFP LKTKDEL-LL SELPSVEELT IVLPEGIELK ENSTTRP00000009599/1-451 AVLSDGEDDL QVEKENKNFP LKTKDEL-LL SELPTVEELT IVLPEGIELK 201 250 ENSP00000274054/1-494 PLGMVSSIIE QLVIIESMTN LPPVNEETVI FKSDRQAAGK IFEIFGPVAH ENSBTAP00000049022/1-360 PLGMVSSIIE QLVIIESMTN VPPVNEETVI FKTDRQAAGK IFEIFGPVAH bmy_14903T0/1-319 PLGM------ ---------- ---------- ---------- IFEIFGPVAH BACU010642/1-387 PLGMVSSIIE QLVIIESMTN VPPVNEETVV FKSDRQAAGK IFEIFGPVAH ENSTTRP00000009599/1-451 PLGMVSSIIE QLVIIESMTN VPPVNEETVV FKSDRQAAGK IFEIFGPVAH 251 300 ENSP00000274054/1-494 PFYVLRFNSS DHIESKGIKI KETMYFAPSM KDFTQYIFTE KLKQDKGSDA ENSBTAP00000049022/1-360 PFYVLRFNSS EHIENKGIKI KDTMYFAPSM KDFTQYIFTE KLKQDRGSDA bmy_14903T0/1-319 PFYVLRFNSS EHIENKGIKI KDTMYFAPSM KDFTQYIFTE RLKQDRGSDA BACU010642/1-387 PFYVLRFNSS EHIENKGIKI KDTMYFAPSM KDFTQYIFTE RLKQDRGSDA ENSTTRP00000009599/1-451 PFYVLRFNSS EHVENNSIKI KDTMYFAPSM KDFTQYIFTE KLKQDRGSDA 301 350 ENSP00000274054/1-494 SWKNDQEPPP EALDFSDDEK EKEAKQRKKS QIQGRKKLKS EFNEPGEDFT ENSBTAP00000049022/1-360 SWKNDQEPPP EALDFSDDEK EKEAKQRKKS QIQGRKKFRS EFNEPGEDFA bmy_14903T0/1-319 SWKNDQEPPP EALDFSDDEK EKEAKQRKKS QIQGRKKFRS EFNEPGEGFS BACU010642/1-387 SWKNDQEPPP EALDFSDDEK EKEAKQRKKS QIQGRKKFRS EFNEPGEGFS ENSTTRP00000009599/1-451 SWKNDQEPPP EALDFSDDEK EKEAKQRKKS QIQGRKKFRS EFNEPGEDFA 351 400 ENSP00000274054/1-494 EVHQNWNAHS SASEHAKGYR NREFTRGFSR ARYPRSCHGR PPPQHFYNSE ENSBTAP00000049022/1-360 EVHHNWNVHS SASEHSKGYH NREFTRGFSQ GE-------- -------NTE bmy_14903T0/1-319 EVHQNWNVHN SASEPSKGYH SREFTRGFSR GRYPRSCPGR PPPPQFYNSE BACU010642/1-387 EVHQNWNVHN SASEPSKGYH SREFTRGFSR GRYPRSCPGR PPPPQFYNSE ENSTTRP00000009599/1-451 EVHQNWNVHS SASEPSKGYH SREFTRGFSR GRYPRSCPGR PPPPQFYNSE 401 450 ENSP00000274054/1-494 HMVSQETSGF PSQRQNNPIM PQYPFPLPVF DMHNFPLRPP P---PPPPPP ENSBTAP00000049022/1-360 K--------- ---------- ---------- ---------- --------KS bmy_14903T0/1-319 HLVPQETSGF LPQRQDGPMM PQYPFPPPGF DMHNFSLPPP PPPLPPPPAS BACU010642/1-387 HMVPQETSGF PPQRQDGPMM PGYPFPPPGF DMHNFSLPPP PPPLPPPPAS ENSTTRP00000009599/1-451 HMVPQETSGF PPQRQDGPMM PQYPFPPPGF DMHNFSLPPP PP--PPPPAS 451 500 ENSP00000274054/1-494 VNMGWATPNM AAHPLLNLPY SLPPPPPPPP LPPPPSSGDS NSHF---GPY ENSBTAP00000049022/1-360 IIMSWQKSCV ---------- ---------- ---------- ---------- bmy_14903T0/1-319 ANMGWAAPAV APHQLIPLPY SLPPPPPPPP LPPPSSSGDT SEGYKEENPY BACU010642/1-387 ANVGWAAPAA APHPLIPLPY SLPPPPPPPP PPPPASSGDS HASHF--GPY ENSTTRP00000009599/1-451 ANMGWAAPAV APHPLIPLPY SLPPPPPPPP LPPPSSSGDS NASHF--GPY 501 550 ENSP00000274054/1-494 ---------- ---Y ENSBTAP00000049022/1-360 ---------- ---- bmy_14903T0/1-319 VLAEAMSIIK VNIY BACU010642/1-387 ---------- ---Y ENSTTRP00000009599/1-451 ---------- ---Y