KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:34 2014 Check: 00 .. Name: ENSTTRP00000006773/1-526 Len: 528 Check: 8841 Weight: 1.00 Name: bmy_11245T0/1-458 Len: 528 Check: 6181 Weight: 1.00 Name: ENSP00000299626/1-526 Len: 528 Check: 809 Weight: 1.00 Name: BACU012515/1-526 Len: 528 Check: 664 Weight: 1.00 Name: ENSBTAP00000049035/1-526 Len: 528 Check: 814 Weight: 1.00 // 1 50 ENSTTRP00000006773/1-526 MAALGVATGG GNWFSALALG VTLLKCLLIP TYHSTDFEVH RNWLAITHSL bmy_11245T0/1-458 MAALGAATGG GSWFSALALG VTLLKCLLIP TYHSTDFEVH RNWLAITHSL ENSP00000299626/1-526 MAALTIATGT GNWFSALALG VTLLKCLLIP TYHSTDFEVH RNWLAITHSL BACU012515/1-526 MAALGAATGG GSWFSALALG VTLLKCLLIP TYHSTDFEVH RNWLAITHSL ENSBTAP00000049035/1-526 MAAFGIATGG SNWFSALALG VTLLKCLLIP TYHSTDFEVH RNWLAITHSL 51 100 ENSTTRP00000006773/1-526 PISQWYYEAT SEWTLDYPPF FAWFEYALSH VAKYFDQEML NVRNLNYCSS bmy_11245T0/1-458 PISQWYYEAT SEWTLDYPPF FAXFEYALSH VAKYFDQEML NVRNLNYSSS ENSP00000299626/1-526 PISQWYYEAT SEWTLDYPPF FAWFEYILSH VAKYFDQEML NVHNLNYSSS BACU012515/1-526 PISQWYYEAT SEWTLDYPPF FAWFEYALSH VAKYFDQEML NVRNLNYSSS ENSBTAP00000049035/1-526 PISQWYYEAT SEWTLDYPPF FAWFEYALSH VAKYFDQEML NVRNLNYSSS 101 150 ENSTTRP00000006773/1-526 RTLLFQRFSV IFTDTLFVYA VHECCKCIDG KKAGRELTEK PKFILSVLLL bmy_11245T0/1-458 RTLLFQRFSV IFTDTLFVYA VHECCKCIDG KKAGKELTEK PKFILSALLL ENSP00000299626/1-526 RTLLFQRFSV IFMDVLFVYA VRECCKCIDG KKVGKELTEK PKFILSVLLL BACU012515/1-526 RTLLFQRFSV IFTDTLFVYA VHECCKCIDG KKAGKELTEK PKFILSVLLL ENSBTAP00000049035/1-526 RTLLFQRFSV IFTDALFVYA VHECCKCIDG KKAGKELTEK PKFILSALLL 151 200 ENSTTRP00000006773/1-526 WNFGLLIVDH IHFQYNGFLS GLMLLSIARL FQKRHMEGAF LFAVLLHFKH bmy_11245T0/1-458 WNFGLLIVDP C--KGDKWVH PMEQLQF--- ---------- ---------- ENSP00000299626/1-526 WNFGLLIVDH IHFQYNGFLF GLMLLSIARL FQKRHMEGAF LFAVLLHFKH BACU012515/1-526 WNFGLLIVDH IHFQYNGFLS GLMLLSIARL FQKRHMEGAF LFAVLLHFKH ENSBTAP00000049035/1-526 WNFGLLIVDH IHFQYNGFLS GLMLLSIARF FQKRHMEGAF LFAVLLHFKH 201 250 ENSTTRP00000006773/1-526 IYLYVAPAY- -GVYLLRSYC FTANKPDGSI RWNSFSFLRL ISLGLIVFLV bmy_11245T0/1-458 -----SPSYF PGTNCFPSFC ---------- -----SFV-- ---------- ENSP00000299626/1-526 IYLYVAPAY- -GVYLLRSYC FTANKPDGSI RWKSFSFVRV ISLGLVVFLV BACU012515/1-526 IYLYVAPAY- -GVYLLRSYC FTANKPDGSI RWNSFSFLRL ISLGLIVFLV ENSBTAP00000049035/1-526 IYLYVAPAY- -GVYLLRSYC FTANKQDGSI RWNSFSFVRL ISLGLIVFLV 251 300 ENSTTRP00000006773/1-526 SALSLGPFLA LNQLPQVFSR LFPFKRGLCH AYWAPNFWAL YSALDKVLSV bmy_11245T0/1-458 -----GSFSS LEPTASSLFP TLPFQEGPLP RVLGPKLLG- -------FEL ENSP00000299626/1-526 SALSLGPFLA LNQLPQVFSR LFPFKRGLCH AYWAPNFWAL YNALDKVLSV BACU012515/1-526 SALSLGPFLA LNQLPQVFSR LFPFKRGLCH AYWAPNFWAL YSALDKVLSI ENSBTAP00000049035/1-526 SALSLGPFLA LNQLPQVFSR LFPFKRGLCH AYWAPNFWAL YSAFDKVLSV 301 350 ENSTTRP00000006773/1-526 IGLELKFLDP SKIPKASMTS GLVQQFQHTV LPSVTPLATL ICTLIAILPS bmy_11245T0/1-458 IGLELKLLDP SKIPKASMTS GLVQQFQHTV LPSVTPLATL ICTLIAILPS ENSP00000299626/1-526 IGLKLKFLDP NNIPKASMTS GLVQQFQHTV LPSVTPLATL ICTLIAILPS BACU012515/1-526 IGLELKLLDP SKIPRASMTS GLVQQFQHTV LPSVTPLATL ICTLIAILPS ENSBTAP00000049035/1-526 IGLELKLLDP NKIPKASMTS GLVQQFQHTV LPSVTPLATF ICTLIAMLPS 351 400 ENSTTRP00000006773/1-526 IFCLWFKPQG PRGFLRCLIL CALSSFMFGW HVHEKAILLA VLPMXXXXXX bmy_11245T0/1-458 IFCLWFKPQG PRGFLRCLIL CALSSFMFGW HVHEKAILLA VLPMSLLSVG ENSP00000299626/1-526 IFCLWFKPQG PRGFLRCLTL CALSSFMFGW HVHEKAILLA ILPMSLLSVG BACU012515/1-526 IFCLWFKPQG PRGFLRCLIL CALSSFMFGW HVHEKAILLA VLPMSLLSVG ENSBTAP00000049035/1-526 VFCLWCKPQG PRGFLRCLIL CALSSFMFGW HVHEKAILLA VLPMSLLSVG 401 450 ENSTTRP00000006773/1-526 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11245T0/1-458 KAGDASIFLI LTTTGHYSLF PLLFTAPELP IKILLMLLFT IYSISSLKTL ENSP00000299626/1-526 KAGDASIFLI LTTTGHYSLF PLLFTAPELP IKILLMLLFT IYSISSLKTL BACU012515/1-526 KAGDASIFLI LTTTGHYSLF PLLFTAPELP IKILLMLLFT IYSISSLKTL ENSBTAP00000049035/1-526 KAVDASIFLI LTTTGHYSLF PLLFTAPELP IKIILMLLFT IYSISSLKTL 451 500 ENSTTRP00000006773/1-526 XXKEKPLFNW METFYLLGLG PLEVFCEFVF PFTSWKLKYP FIPLLLTSVY bmy_11245T0/1-458 FRKEKPLFNW METFYLLGLG PLEVFCEFVF PFTSWKLKYP FIPLLLTSVY ENSP00000299626/1-526 FRKEKPLFNW METFYLLGLG PLEVCCEFVF PFTSWKVKYP FIPLLLTSVY BACU012515/1-526 FRKEKPLFNW METFYLLGLG PLEVFCEFVF PFTSWKLKYP FIPLLLTSVY ENSBTAP00000049035/1-526 FRKEKPLFNW METFYLLGLG PLEVFCEFVF PFTSWNLKYP FIPLLLTSVY 501 550 ENSTTRP00000006773/1-526 CAVGITYAWF KLYVSVLTDP PVGKTKKQ bmy_11245T0/1-458 CAVGITHAWF KLYVSVLTDP PVGKTKKQ ENSP00000299626/1-526 CAVGITYAWF KLYVSVLIDS AIGKTKKQ BACU012515/1-526 CAVGITHAWF KLYVSVLTDP PVGKTKKQ ENSBTAP00000049035/1-526 CAVGITYAWL KLYVSVLIDP PVGKTKKQ