KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:35 2014 Check: 00 .. Name: ENSP00000239830/1-488 Len: 493 Check: 737 Weight: 1.00 Name: ENSBTAP00000049060/1-406 Len: 493 Check: 4974 Weight: 1.00 Name: ENSTTRP00000008418/1-477 Len: 493 Check: 9682 Weight: 1.00 Name: bmy_06804T0/1-258 Len: 493 Check: 832 Weight: 1.00 Name: BACU003125/1-489 Len: 493 Check: 2918 Weight: 1.00 // 1 50 ENSP00000239830/1-488 MNFTPTHTPV CRKRTVVSKR GVA--VSGPT KRRGM--ADS LESTPLPSPE ENSBTAP00000049060/1-406 MNFTPTQSPV CRKPAAVHKH EAASSFSSPT RWKGVSFSDS VQSTPLPSVE ENSTTRP00000008418/1-477 ---------- ---LTALPKQ EAAGGFSGPT RWKGVSFSDS VQSTPLPSVE bmy_06804T0/1-258 ---------- ---------- ---------- ---------- ---------- BACU003125/1-489 ---MNVSFLI SCRLTALPKH EAAGGFSGPT RWKGVSFSDS VQSTPLPSVE 51 100 ENSP00000239830/1-488 DRLAKLHPSK ELLEYYQKKM AECEAENEDL LKKLELYKEA CEGQHKLECD ENSBTAP00000049060/1-406 DRLAVLCPSQ ELLEYYQKKM SECEAENEDL LKKLELYREA CEGQHKLEWD ENSTTRP00000008418/1-477 DRLAVLCPSQ ELLEYYQKMM SECEAENEGL LKKLELYREA CEGQHKLEWD bmy_06804T0/1-258 ---------- ---------- ---------- ---------- ---------- BACU003125/1-489 DRLAVLFPSQ ELLEYYQKKM SECEAENEGL LKKLELYREA CEGQHKLERD 101 150 ENSP00000239830/1-488 LQQREEEIAE LQKALSDMQV CLFQEREHVL RLYSENDRLR IRELEDKKKI ENSBTAP00000049060/1-406 LQQREEEIAE LQKALSDMQV CLFQEREHVL RLYSENDRLR IRELEDKKKI ENSTTRP00000008418/1-477 LQQREEEIAE LRKALSDVQV CLFQEREHVL RLYSENDRLR IRELEDKKKI bmy_06804T0/1-258 ---------- ---------- ---------- ---------- ---------- BACU003125/1-489 LQQREEEIAE LRKALSDVQV CLFQEREHVL RLYSENDRLR IRELEDKKKI 151 200 ENSP00000239830/1-488 QNLLALVGTD AGEVTYFCKE PPHKVTILQK TIQAVGECEQ SESSAFKADP ENSBTAP00000049060/1-406 QNLLALVGTD TGEVTYFYKE PPNKVSILQK TVQPVEVREK NESSALRADS ENSTTRP00000008418/1-477 QNLLALVGTD TGEVTYFYKE PPNKVSIFQK TIQAVEVSEQ NESSAFRADS bmy_06804T0/1-258 ---------- ---------- ---------- ---------- ---------- BACU003125/1-489 QNLLALVGTD IGEVTYFYKE PPNKVSILQK TIQAVEVCEQ NESSAFRADS 201 250 ENSP00000239830/1-488 KISKRRPS-R ERKESSEHYQ RDIQTLILQV EALQAQLGEQ TKLSREQIEG ENSBTAP00000049060/1-406 KGSRRKSAGR EKEVSTGLHQ RDVQTLALQV EALQAQLEEQ TRLSREQVAG ENSTTRP00000008418/1-477 KGSRRKPAVR RKEESAQLHQ RDVETLILQV EALQAQLEER SRLSQEQVAG bmy_06804T0/1-258 ---------- ---------- -------MQV EALQAQLEER SRLSQEQVAG BACU003125/1-489 KGSRRKPAVR QKEESAQLHQ RDVQTLILQV EALQAQLEER SRLSQEQVAG 251 300 ENSP00000239830/1-488 LIEDRRIHLE EIQVQHQRNQ NKIKELTKNL HHTQELLYES TKDFLQLRSE ENSBTAP00000049060/1-406 LMEERRICVE EVQVHQQRSR DRITELTRSL HHTQELLYES TKDFLQLRFE ENSTTRP00000008418/1-477 LVEERRIRME EVQAHQQRDR ERVAELTRNL HHAKELLYES TKDFLQLKFE bmy_06804T0/1-258 LVEERRICME EVQAHQQRDR ERVAELTRNL HHTKELLYES TKDFLQLKFE BACU003125/1-489 LVEERRICME EVQAHQQRDR ERVAELTRNL HHTKELLYES TRDFLQLKFE 301 350 ENSP00000239830/1-488 NQNKEKSWML EKDNLMSKIK QYRVQCKKKE DKIGKVLPVM HESHHAQSEY ENSBTAP00000049060/1-406 NQNKEKSWML EKDHLMSKIK EYRMQCKKKE EKMGKMWLV- HESHHNQNEY ENSTTRP00000008418/1-477 NQSKEKSWML EKDHLMSKIK QYRVQCKKKE DKSGKVWPV- HESHYHQNEY bmy_06804T0/1-258 NQNKEKSWML EKDHLMSKIK QYRVQCKKKE DKTGKVWPV- HESHYNQNQY BACU003125/1-489 NQNKEKSWML EKDHLMSKIK QYRVQCKKKE DKTGKVWPV- HESHYNQNQY 351 400 ENSP00000239830/1-488 IKSLKDKLVQ EKKLSNMYQE QCISLEEELA RIREEEGMRR EIFKDRTNKM ENSBTAP00000049060/1-406 IKSLKDKLIQ ERRLSSMYQE QCISLEEELA RIREEEGARR EIF------- ENSTTRP00000008418/1-477 IKS--EKIVQ EKKLSSMYQE QCISLEEELA QIREEEGVRR EIFKDRTNKM bmy_06804T0/1-258 IKSLKEKIVQ EKKLSSMYQE QCISLEEELA QIREEEG--- ----DRTNKM BACU003125/1-489 IKSLKEKIVQ EKKLSSMYQE QCISLEEELA QIREEEGVRR EIFKDRTNKM 401 450 ENSP00000239830/1-488 GKRLQIMTKR YEALERRRIL EVEGFKTDIK VLRQKLKDLE QMLYKATVNA ENSBTAP00000049060/1-406 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008418/1-477 GRRLQVMTKR YEALEKRRVL EVEGFKTDIK ALKQKLKDLE QMLYKATLNT bmy_06804T0/1-258 GRRLQVMTKR YEALENRRVL EVEGFKTDIK ALKQKLKDLE QMLYKATLNT BACU003125/1-489 GRRLQVMTKR YEALENRRVL EVEGFKTDIK ALKQKLKDLE QMLYKATLNT 451 500 ENSP00000239830/1-488 RANQDLALLC EVRDSNRRAH KIQGELKNLK SKVFGLENEL RLC ENSBTAP00000049060/1-406 ---------- ---------- KVWGSLP-LG GRAAG----- --- ENSTTRP00000008418/1-477 RANQDLAILC EVRDSNRRAH RIQGELKNLK SKVFSLENEL RLC bmy_06804T0/1-258 RANQDLAILC EVRDSNRRAH KIQGELKNLK SKVFSLENEL RLC BACU003125/1-489 RANQDLAILC EVRDSNRWAH KIQGELKNLK SKVFSLENEL RLC