KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:36 2014 Check: 00 .. Name: ENSBTAP00000049073/1-740 Len: 794 Check: 877 Weight: 1.00 Name: ENSP00000215057/1-734 Len: 794 Check: 2619 Weight: 1.00 Name: BACU005930/1-735 Len: 794 Check: 8359 Weight: 1.00 Name: bmy_21429T0/1-657 Len: 794 Check: 8625 Weight: 1.00 Name: ENSTTRP00000001878/1-735 Len: 794 Check: 2886 Weight: 1.00 // 1 50 ENSBTAP00000049073/1-740 PSLVFPMRPA ALGSPGRASL EDEGPVTVKL EDSEED-EPA AWDLGPEAAR ENSP00000215057/1-734 ------MRPA VLGSPDRAPP EDEGPVMVKL EDSEEEGEAA LWDPGPEAAR BACU005930/1-735 ------MRPT ALGSPGHAPP EDEGPITVKL EESEEEGEAA PWDPGPEAAR bmy_21429T0/1-657 ------MRPT ALGSPGHAPP EDEGPITVKL EESEEEGEAA PWDPGPEAAR ENSTTRP00000001878/1-735 ------MRPT ALGSPGHAPP EDEGPITVKL EESEEEGEAA PWDPGPEAAR 51 100 ENSBTAP00000049073/1-740 QQFRRFRYEE AAGPGQALAQ LRELCRQWLR PEAHSKEQML ELLVLEQFLG ENSP00000215057/1-734 LRFRCFRYEE ATGPQEALAQ LRELCRQWLR PEVRSKEQML ELLVLEQFLG BACU005930/1-735 QRFRHFRYEE AVGPREALAR LRELCRQWLR PEVHSKEQVL ELLVLEQFLG bmy_21429T0/1-657 QRFRHFHYEE AVGPREALAR LRELCRQWLR PEVHSKEQML ELLVLEQFLG ENSTTRP00000001878/1-735 QRFRHFHYEE AVGPREALAR LRELCRQWLR PEVHSKEQML ELLVLEQFLG 101 150 ENSBTAP00000049073/1-740 VLPPEIQARV RGQQPGSPEE AAALVEGFRR EPGGPRRWVT VQVQGQEVLS ENSP00000215057/1-734 ALPPEIQARV QGQRPGSPEE AAALVDGLRR EPGGPRRWVT VQVQGQEVLS BACU005930/1-735 ALPAEIQARV RGQQPGSPEE AAALVEGLRR EPGGPRRWVT VQVQGQEVLS bmy_21429T0/1-657 ALPAEIQARV RGQQPGSPEE AAALVEGLRR EPGGPRRWVT VQVQGQEVLS ENSTTRP00000001878/1-735 ALPPEIQARV RGQQPGSPEE AAALVEGLRR EPGGPRRWVT VQVQGQEVLS 151 200 ENSBTAP00000049073/1-740 ERTEPPDFQA LPQPIPETPE PGLEMLPGAT EQSTLGLRVK EESEVTEEPE ENSP00000215057/1-734 EKMEPSSFQP LPETEPPTPE PGPKTPPRTM QESPLGLQVK EESEVTEDSD BACU005930/1-735 EKTEPSDFQP LPQVTPRAPE PGLEMPHGTT QESSLGLRVK EEPGVTEDPE bmy_21429T0/1-657 EKTEPSDFQP LPQVTPRAPE PGLEMPHGAT QESSLGLRVK EEPGVTEDPE ENSTTRP00000001878/1-735 EKMEPSDFQP LPQITPRTPE PGLEMPRGAT QESSLGLWVK EEPGVTEDPE 201 250 ENSBTAP00000049073/1-740 PLHPRPLSSL QGTPFTLLPD QARDCVVVLD QASPHSEPGP EVSSWRQHRG ENSP00000215057/1-734 FLESGPLAAT QESVPTLLPE EAQRCGTVLD QIFPHSKTGP EGPSWREHPR BACU005930/1-735 LLDSGPLTNP QEATSTVLPE EAQGCGVALD QASPHSEAGP EGSSWTEHPE bmy_21429T0/1-657 LLDSGPLTNP QEATSTVLPE EAQGCGVALD QASPHSEAGP EGSSWTEHPE ENSTTRP00000001878/1-735 LLDSGPLTNP QEATSTVLPE EAQGCGVALD QASPHSETGP EGSSWTEHPE 251 300 ENSBTAP00000049073/1-740 ALWQEEAGGI FSP------- ---------- ---------- -------GFT ENSP00000215057/1-734 ALWHEEAGGI FSP------- ---------- ---------- -------GFA BACU005930/1-735 ALWQEEAGSI FSP------- ---------- ---------- -------GFT bmy_21429T0/1-657 ALWQEEAGSI FSPVSGRSSS HRFRRAGVAL GTSGFSVMNE WIPFCNAGFT ENSTTRP00000001878/1-735 ALWQEEAGSI FSP------- ---------- ---------- -------GFT 301 350 ENSBTAP00000049073/1-740 LQMDNVSVDP DIMSAHVHLP WDLGEASLTG RLESASREGG FSQALVPSSD ENSP00000215057/1-734 LQLGSISAGP GSVSPHLHVP WDLGMAGLSG QIQSPSREGG FAHALLLPSD BACU005930/1-735 LQMDSISAGP DTVSPHVHLP WDLGVASLTG RLESPSLEGG FSHALLLSSD bmy_21429T0/1-657 LQMDSISAGP DTVSPHVHLP WDLGVASLTG RLESPSLEGG FSHALVLSSD ENSTTRP00000001878/1-735 LQMDSISAGP DTVSPHIHLP WDLGVASLTG RLESPSLEGG FSHALVLSSD 351 400 ENSBTAP00000049073/1-740 LRGEPDPT-E DTCQGLSHGL GAASWRAPRG RSRARGRPGT GAGAERGGRC ENSP00000215057/1-734 LRSEQDPTDE DPCRGVGPAL ITTRWRSPRG RS--RGRPST GGGVVRGGRC BACU005930/1-735 PGGEQDPT-Y DPRQGVGPGL AATRWRAPRG RSRGRGRPST GAGAVRGGRC bmy_21429T0/1-657 PGGEQDPM-Y DPRQGVGPGL AAARWRAPRG RSRGRGRPST GAGAVRGGRC ENSTTRP00000001878/1-735 PGGEQDPT-Y DPRQGVGPGL AAARWRAARG RSRGRGRPST GAGAVRGGRC 401 450 ENSBTAP00000049073/1-740 DVCGKVFSQR SNLLRHQKIH TGERPFVCGE CGRSFSRSSH LLRHQLTHTE ENSP00000215057/1-734 DVCGKVFSQR SNLLRHQKIH TGERPFVCSE CGRSFSRSSH LLRHQLTHTE BACU005930/1-735 DVCGKVFSQR SNLLRHQKIH TGERPFVCGE CGRSFSRSSH LLRHQLTHTE bmy_21429T0/1-657 DVCGKVFSQR SNLLRHQKIH TGERPFVCGE CGRSFSRSSH LLRHQLTHTE ENSTTRP00000001878/1-735 DVCGKVFSQR SNLLRHQKIH TGERPFVCGE CGRSFSRSSH LLRHQLTHTE 451 500 ENSBTAP00000049073/1-740 ERPFVCA--- ---------- ----DCGQGF VRSGRLEEHR RVHTGEQPFR ENSP00000215057/1-734 ERPFVCG--- ---------- ----DCGQGF VRSARLEEHR RVHTGEQPFR BACU005930/1-735 ERPFVCGELQ HRRVHSGERP FACAECGQSF RQRSNLTQHR RIHTGERPFA bmy_21429T0/1-657 ERPFVCG--- ---------- ----DCGQGF VRSARLEEHR RVHTGEQPFR ENSTTRP00000001878/1-735 ERPFVCG--- ---------- ----DCGQGF VRSARLEEHR RVHTGEQPFR 501 550 ENSBTAP00000049073/1-740 CAECGQSFRQ RSNLLQHQRI H-GDPPGPSA APPAPPGAPE PPGPFPCSEC ENSP00000215057/1-734 CAECGQSFRQ RSNLLQHQRI H-GDPPGPGA KPPAPPGAPE PPGPFPCSEC BACU005930/1-735 CAECGKAFRQ RPTLTQHLRV HTGEKP---- ---------- ----FACPEC bmy_21429T0/1-657 CAECGQSFRQ RSNLLQHQRI H-GDPPGPGA APPAPPGAPE PPGPFPCSEC ENSTTRP00000001878/1-735 CAECGQSFRQ RSNLLQHQRI H-GDPPGPGA APPAPPGAPE PPGPFPCSEC 551 600 ENSBTAP00000049073/1-740 RQSFARRAVL LEHQAVHTGD KCFGCAECGE RFGRRTVLLQ HRRVHSGERP ENSP00000215057/1-734 RESFARRAVL LEHQAVHTGD KSFGCVECGE RFGRRSVLLQ HRRVHSGERP BACU005930/1-735 GQRFSQRLKL TRHQRTHTGE KPYHCSECGL GFTQVSRLTE HQRIHTGERP bmy_21429T0/1-657 RESFARRAVL LEHQAVHTGD KSFGCVECGE RFGRRSVLLQ HRRVHSGERP ENSTTRP00000001878/1-735 RESFARRAVL LEHQAVHTGD KSFGCVECGE RFGRRSVLLQ HRRVHSGERP 601 650 ENSBTAP00000049073/1-740 FRCAECGQSF RQRSNLTQHR RIHTGERPFT CAECGKAFRQ RPTLTQHLRV ENSP00000215057/1-734 FACAECGQSF RQRSNLTQHR RIHTGERPFA CAECGKAFRQ RPTLTQHLRV BACU005930/1-735 FACPDCGQSF RQRSNLTQHR RIHTGERPFA CAQCGKAFRQ RPTLTQHLRV bmy_21429T0/1-657 FACAECGQSF RQRSNLTQHR RI-------- ---------- ---------- ENSTTRP00000001878/1-735 FACAECGQSF RQRSNLTQHR RIHTGERPFA CAECGKAFRQ RPTLTQHLRV 651 700 ENSBTAP00000049073/1-740 HTGEKPFACP ECGQRFSQRL KLTRHQRTHT GEKPYRCREC GLGFTQVSRL ENSP00000215057/1-734 HTGEKPFACP ECGQRFSQRL KLTRHQRTHT GEKPYHCGEC GLGFTQVSRL BACU005930/1-735 HTGEKPFACP ECGQRFSQRL KLTRHQRTHT GEKPYHCSEC GLGFTQVSRL bmy_21429T0/1-657 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001878/1-735 HTGEKPFACP ECGQRFSQRL KLTRHQRTHT GEKPYHCSEC GLGFTQVSRL 701 750 ENSBTAP00000049073/1-740 TEHQRIHTGE RPFACPECGQ RFRQHANLTQ HRRIHTGERP YACPECGKAF ENSP00000215057/1-734 TEHQRIHTGE RPFACPECGQ SFRQHANLTQ HRRIHTGERP YACPECGKAF BACU005930/1-735 TEHQRIHTGE RPFACPDCGQ SFRQHANLTQ HRRIHTGERP YACPECGKAF bmy_21429T0/1-657 ---------- ---------- ---------- ----HTGERP XACPECGKAF ENSTTRP00000001878/1-735 TEHQRIHTGE RPFACPECGQ SFRQHANLTQ HRRIHTGERP YACPECGKAF 751 800 ENSBTAP00000049073/1-740 RQRPTLTQHL RTHRREKPFA CQDCGRRFHQ STKLIQHQRV HSAE ENSP00000215057/1-734 RQRPTLTQHL RTHRREKPFA CQDCGRRFHQ STKLIQHQRV HSAE BACU005930/1-735 RQRPTLTQHL RTHRREKPFA CQDCGRCFHQ STKLIQHQRV HSAE bmy_21429T0/1-657 RQRPTLTQHL RTHRREKPFA CQDCGRCFHQ STKLIQHQRV HSAE ENSTTRP00000001878/1-735 RQRPTLTQHL RTHRREKPFA CQDCGRCFHQ STKLIQHQRV HSAE