KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:59:37 2014 Check: 00 ..
Name: ENSP00000475071/1-438 Len: 874 Check: 2560 Weight: 1.00
Name: ENSBTAP00000049108/1-438 Len: 874 Check: 4044 Weight: 1.00
Name: BACU009762/1-313 Len: 874 Check: 1514 Weight: 1.00
Name: ENSTTRP00000016097/1-518 Len: 874 Check: 2891 Weight: 1.00
Name: bmy_18957T0/1-874 Len: 874 Check: 4104 Weight: 1.00
//
1 50
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 MGVGHASSGP VALGALPLCI WGPGLSQNGA GASSLWGRAE PGVGGEPGTG
51 100
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 MGTRSVSEMM AYHSFCQRSS GPGLWGAISQ PQGRFWTWLP FRPWPRRAGG
101 150
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 GYMDEGKDEE RGGDDEGAAT ATALPQAGRG TPQVCVAPAP PRPVAARALR
151 200
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 AGGGAAASGG GGAEEAETAE TAEKAERKVE AEAKVEGKVE AAGKVEAAGK
201 250
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 VDATGKVETA GKVDAAGKVE TAEGPGRRVE LKLEPEPEPE PAREAEQGPK
251 300
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ---------- ---------- ----------
bmy_18957T0/1-874 GEPKQEPEDE NPARSGGGGG SDEVPLPTLP SDPSRPPDPS PRRSRAPRRR
301 350
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 ---------- ---------- ----PRRGPG GGCLDVDFAV GPPGCSHVNS
bmy_18957T0/1-874 PRPRPQTRLR TPPQPRPRPP PRPRPRRGPG GGCLDVDFAV GPPGCSHVNS
351 400
ENSP00000475071/1-438 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ---------- ----------
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 FKVGENWRQE LRVIYQCFVW CGTPETRKSK AKSCICHVCG THLNRLHSCL
bmy_18957T0/1-874 FKVGENWRQE LRVIYQCFVW CGTPETRKSK AKSCICHVCG THLNRLHSCL
401 450
ENSP00000475071/1-438 ---------- ---------- ---------- ------MCKD YVYDKDIEQI
ENSBTAP00000049108/1-438 ---------- ---------- ---------- ------MCKD YVYDRDIEQI
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 SCVFFGCFTE KHIHEHAETK QHNLAVDLYY GGIYCFMCKD YVYDKDIEQI
bmy_18957T0/1-874 SCVFFGCFTE KHIHEHAETK QHNLAVDLYY GGIYCFMCKD YVYDKDIEQI
451 500
ENSP00000475071/1-438 AKEEQGEALK LQASTSTEVS HQQCSVPGLG EKFPTWETTK PELELLGHNP
ENSBTAP00000049108/1-438 AKEEQGEALK LQASTSTEVS HQQYSVPGLG EKYPTWETTK PELELLGHNP
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 AKEEQGEALK L--------- -QQCSMPGLS EKYPTWETTK PELELLGHNP
bmy_18957T0/1-874 AKEEQGEALK LQASTSTEVS HQQCSMPGLS EKYPTWETTK PELELLGHNP
501 550
ENSP00000475071/1-438 RRRRITSSFT IGLRGLINLG NTCFMNCIVQ ALTHTPILRD FFLSDRHRCE
ENSBTAP00000049108/1-438 RRRRIASSFT IGLRGLINLG NTCFMNCIVQ ALTHTPILRD FFLSDRHRCE
BACU009762/1-313 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000016097/1-518 RRRRITSSFT IGLRGLINLG NTCFMNCIVQ ALTHTPILRD FFLSDRHRCE
bmy_18957T0/1-874 RRRRITSSFT IGLRGLINLG NTCFMNCIVQ ALTHTPILRD FFLSDRHRCE
551 600
ENSP00000475071/1-438 MPSPELCLVC EMSSLFRELY SGNPSPHVPY KLLHLVWIHA RHLAGYRQQD
ENSBTAP00000049108/1-438 MPSPELCLVC EMSSLFRELY SGNPSPHVPY KLLHLVWIHA RHLAGYRQQD
BACU009762/1-313 ---------- -MSSLFRELY SGNPSPHVPY KLLHLVWIHA RHLAGYRQQD
ENSTTRP00000016097/1-518 MPSPELCLVC EMSSLFRELY SGNPSPHVPY KLLHLVWIHA RHLAGYRQQD
bmy_18957T0/1-874 MPSPELCLVC EMSSLFRELY SGNPSPHVPY KLLHLVWIHA RHLAGYRQQD
601 650
ENSP00000475071/1-438 AHEFLIAALD VLHRHCKGDD VGKAANNPNH CNCIIDQIFT GGLQSDVTCQ
ENSBTAP00000049108/1-438 AHEFLIAALD VLHRHCKGDD AGKAASNPNH CNCIIDQIFT GGLQSDVTCQ
BACU009762/1-313 AHEFLIAALD VLHRHCKGDD AGKAANNPNH CNCIIDQIFT GGLQSDVTCQ
ENSTTRP00000016097/1-518 AHEFLIAALD VLHRHCKGDD AGKAANNPNH CNCIIDQIFT GGLQSDVTCQ
bmy_18957T0/1-874 AHEFLIAALD VLHRHCKGDD AGKAANNPNH CNCIIDQIFT GGLQSDVTCQ
651 700
ENSP00000475071/1-438 ACHGVSTTID PCWDISLDLP GSCTSFWPMS PGRESSVNGE SHIPGITTLT
ENSBTAP00000049108/1-438 ACHGVSTTID PCWDISLDLP GSCTSFWPMS PGRESSVNGE SHIPGITTLT
BACU009762/1-313 ACHGVSTTID PCWDISLDLP GSCTSFWPMS PGRESSVNGE SHIPGITTLT
ENSTTRP00000016097/1-518 ACHGVSTTID PCWDISLDLP GSCTSFWPMS PGREGSVNGE SHIPGITTLT
bmy_18957T0/1-874 ACHGVSTTID PCWDISLDLP GSCTSFWPMS PGRESSVNGE SHIPGITTLT
701 750
ENSP00000475071/1-438 DCLRRFTRPE HLGSSAKIKC GSCQSYQEST KQLTMNKLPV VACFHFKRFE
ENSBTAP00000049108/1-438 DCLRRFTRPE HLGSSAKIKC GSCQSYQEST KQLTMNKLPV VACFHFKRFE
BACU009762/1-313 DCLRRFTRPE HLGSSAKIKC GSCQSYQEST KQLTMNKLPV VACFHFKRFE
ENSTTRP00000016097/1-518 DCLRRFTRPE HLGSSAKIKC GSCQSYQEST KQLTMNKLPV VACFHFKRFE
bmy_18957T0/1-874 DCLRRFTRPE HLGSSAKIKC GSCQSYQEST KQLTMNKLPV VACFHFKRFE
751 800
ENSP00000475071/1-438 HSAKQRRKIT TYISFPLELD MTPFMASSKE SRMNGQLQLP TNSGNNENKY
ENSBTAP00000049108/1-438 HSAKQRRKIT TYISFPLELD MTPFMASSKE SRMNGQLQLP TNSGNDENKY
BACU009762/1-313 HSAKQRRKIT TYISFPLELD MTPFMASSKE SRMNGQLQLP TNSGNDENKY
ENSTTRP00000016097/1-518 HSAKQRRKIT TYISFPLELD MTPFMASSKE SRMNGQLQLP TNSGNDENKY
bmy_18957T0/1-874 HSAKQRRKIT TYISFPLELD MTPFMASSKE SRMNGQLQLP TNSGNDENKY
801 850
ENSP00000475071/1-438 SLFAVVNHQG TLESGHYTSF IRHHKDQWFK CDDAVITKAS IKDVLDSEGY
ENSBTAP00000049108/1-438 SLFAVVNHQG TLESGHYTSF IRHHKDQWFK CDDAVITKAS IKDVLDSEGY
BACU009762/1-313 SLFAVVNHQG TLESGHYTSF IRHHKDQWFK CDDAVITKAS IKDVLDSEGY
ENSTTRP00000016097/1-518 SLFAVVNHQG TLESGHYTSF IRHHKDQWFK CDDAVITKAS IKDVLDSEGY
bmy_18957T0/1-874 SLFAVVNHQG TLESGHYTSF IRHHKDQWFK CDDAVITKAS IKDVLDSEGY
851 900
ENSP00000475071/1-438 LLFYHKQVLE HESEKVKEMN TQAY
ENSBTAP00000049108/1-438 LLFYHKQVLE HESEKVKEVN TQAY
BACU009762/1-313 LLFYHKQVLE HESEKVKEVN TQAY
ENSTTRP00000016097/1-518 LL-------- ---------- ----
bmy_18957T0/1-874 LLFYHKQVLE HESEKVKEVN TQAY