KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:38 2014 Check: 00 .. Name: BACU009601/1-211 Len: 332 Check: 2442 Weight: 1.00 Name: ENSP00000318997/1-324 Len: 332 Check: 7162 Weight: 1.00 Name: bmy_22404T0/1-285 Len: 332 Check: 1398 Weight: 1.00 Name: ENSBTAP00000049172/1-324 Len: 332 Check: 6585 Weight: 1.00 // 1 50 BACU009601/1-211 ---------- --MGNLTILY EFLLLGFGSL HGLQFFLLGI FLGIYVVTLL ENSP00000318997/1-324 MSFFFVDLRP MNRSATHIVT EFILLGFPGC WKIQIFLFSL FLVIYVLTLL bmy_22404T0/1-285 ---------- MNRSATCIVT EFVLLGFPGR WEXQIFLFSL FLVVYALALL ENSBTAP00000049172/1-324 TSFFFVDLKP MNRSATHIVM EFVLLGFPGC WEVQIFLFSL FLVVYALTLV 51 100 BACU009601/1-211 GNILILTVIS LDCSIQTPMY FFLSNFSFFE IWYTTSIAPK MLQTHLSGPQ ENSP00000318997/1-324 GNGAIIYAVR CNPLLHTPMY FLLGNFAFLE IWYVSSTIPN MLVNILSKTK bmy_22404T0/1-285 GNGAIICAVR WDPRLHSPMY FLLGNFAFLE IWYVSSTVPN MLVNILSKTK ENSBTAP00000049172/1-324 GNGAIICAVK WDPRLYTPMY FLLGNFAFLE IWYVSSTVPN MLVNILSKTK 101 150 BACU009601/1-211 VISFVGCVVQ FYFFGSMAVV ECFLLAAMSY DRYFAICSPP QYPSLMNVYT ENSP00000318997/1-324 AISFSGCFLQ FYFFFSLGTT ECLFLAVMAY DRYLAICHPL QYPAIMTVRF bmy_22404T0/1-285 AISFSGCFLQ FHFFFSLGTA ECLFLA---- ---------- -YPTIMTRKL ENSBTAP00000049172/1-324 AISFSGCFLQ FYFFFSLGTA ECLFLAVMAY DRYQAICHPL HYPIIMTRRL 151 200 BACU009601/1-211 C--------- -------IP- ---------- ---------- ---------- ENSP00000318997/1-324 CGKLVSFCWL IGFLGYPIPI FYISQLPFCG PNIIDHFLCD MDPLMALSCA bmy_22404T0/1-285 CGTLVSLCWL XGFLGYPIPI FFISQLPFCG PNIIDHFLCD MDPLMALSCA ENSBTAP00000049172/1-324 CGTLVSLCWL IGFLGYPIPI FFISQLPFCG PNIIDHFLCD IDPLMALSCA 201 250 BACU009601/1-211 ---------- ---------- ---------- ---------- ---------- ENSP00000318997/1-324 PAPITECIFY TQSSLVLFFT SMYILRSYIL LLTAVFQVPS AAGRRKAFST bmy_22404T0/1-285 PAPITEFIFY TQSSFA---- ---------- --------PS AAGRRKDFSI ENSBTAP00000049172/1-324 PAPITEFIFY TQSSLVLFFT IMYILRSYTL LLRAVLQIPS TAGRRKAFST 251 300 BACU009601/1-211 ----LAVVTL YYRTLGTVYT IPTATQAVAL NKIFSLFYTV VTPMVNPIVY ENSP00000318997/1-324 CGSHLVVVSL FYGTVMVMYV SPTYGIPTLL QKILTLVYSV TTPLFNPLIY bmy_22404T0/1-285 CGSHLAVVSL FYGTVMVMYV SPTYGISTLM QKILTLVYSI MIPFLNPLIY ENSBTAP00000049172/1-324 CGSHLTVVSL FYGTVMVMYV SPTYGISALM QKILTLVYSI MTPFLNPLIY 301 350 BACU009601/1-211 SLRNKDVKKA VRRLMSQWVY AKRT------ -- ENSP00000318997/1-324 TLRNKDMKLA LRNVLFGMRI RQNS------ -- bmy_22404T0/1-285 SLCNKDMKLA LRNVLFGMRI SQNSQAKDVS YF ENSBTAP00000049172/1-324 SLRNKDMKLA LRNVLFGRRI SQNS------ --