KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:40 2014 Check: 00 .. Name: ENSP00000357650/1-730 Len: 1089 Check: 4144 Weight: 1.00 Name: ENSBTAP00000049243/1-677 Len: 1089 Check: 2870 Weight: 1.00 Name: bmy_09685T0/1-684 Len: 1089 Check: 385 Weight: 1.00 Name: BACU007488/1-478 Len: 1089 Check: 7450 Weight: 1.00 Name: ENSTTRP00000014011/1-808 Len: 1089 Check: 3092 Weight: 1.00 // 1 50 ENSP00000357650/1-730 MGVCQRTRAP WKEKSQLERA ALGFRKGGSG MFASGWNQTV PIEEAGSMAA ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ------MASL bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000357650/1-730 LLLLPLLLLL PLLLLKLHLW PQLRWLPADL AFAVRALCCK RALRARALAA ENSBTAP00000049243/1-677 LLLLLLLLLL PLLLLPLRIW SRLRWLAADL AFTMRALRCK RALRARALAA bmy_09685T0/1-684 ---------- ---------- ---------L AFTVRALRCK RALRARALAA BACU007488/1-478 ---------- ---------- ---------- -------MMA RPYRTLQ--- ENSTTRP00000014011/1-808 ---------- ---------- ---------- -------MSR PPLRRNN--- 101 150 ENSP00000357650/1-730 AAADPEGPEG GCSLAWRLAE LAQQRAAHTF LIHGSRRFSY SEAERESNRA ENSBTAP00000049243/1-677 AAADPEGPEG GCSLAWRLAQ LARQRPAHTF LIHGAQRFSY AEAERHSNRA bmy_09685T0/1-684 AAADPEGPEG GCSLAWRLAQ LARQRPAHTF LIHGAQRFSY AEAERQSNRA BACU007488/1-478 -------PHS G--------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 ------GPDP GIK------- ---------- ---------- ---ERREHRP 151 200 ENSP00000357650/1-730 ARAFLRALGW DW-------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ARAFLRARGW DG-------- ---------- ---------- ---------- bmy_09685T0/1-684 ARAFLRARGW DW-------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 GLVRVRAASR PGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 201 250 ENSP00000357650/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ---------- bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 251 300 ENSP00000357650/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ---------- bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 301 350 ENSP00000357650/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ---------- bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 351 400 ENSP00000357650/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ---------- bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 401 450 ENSP00000357650/1-730 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049243/1-677 ---------- ---------- ---------- ---------- ---------- bmy_09685T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 451 500 ENSP00000357650/1-730 ---------- ---------- GPDGG-DSGE GSAGEGERAA PGAGDAAAGS ENSBTAP00000049243/1-677 ---------- ---------- GLGGG---GT GGAGEGERAA HCARDQAAGS bmy_09685T0/1-684 ---------- ---------- GPGGGDDSGA GGAGEGERAV HGVRDAAAGS BACU007488/1-478 ---------- ---------- AP-------- ---------- ---------- ENSTTRP00000014011/1-808 XXXXXXXXXX XXXXXXXXXX XX-------- ---------- ---------- 501 550 ENSP00000357650/1-730 GAEFAGGDGA ARGGGAAAPL SPGATVALLL PAGPEFLWLW FGLAKAGLRT ENSBTAP00000049243/1-677 GAA-----RA VREGDGAAPL APGATVALLL PACPEFLWLW FGLAKAGLRT bmy_09685T0/1-684 GAA-----RP VREGDGATPL APGATVALLL PACPEFLWLW FGLAKAGLRA BACU007488/1-478 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014011/1-808 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000357650/1-730 AFVPTALRRG PLLHCLRSCG ARALVLA--- ---------- PEFLESLEPD ENSBTAP00000049243/1-677 AFVPTALRRG PLQHCLRSCG ARALVLA--- ---------- PEFLESLEPD bmy_09685T0/1-684 AFVPTALRRG PLLHCLRSCG ARALVLAPAV ERWSYAFPPH PEFLESLEPD BACU007488/1-478 ---------- ---------- ---------- ---------- REFLESLEPD ENSTTRP00000014011/1-808 ---------- ---------- ---------- ---------- XXFLESLEPD 601 650 ENSP00000357650/1-730 LPALRAMGLH LWAAGPGTHP AGISDLLAEV SAEVDGPVPG YLSSPQSITD ENSBTAP00000049243/1-677 LPALRAMGLH LWTVGSDTRP AGISDFLAEA SAEVDGPVPG YLSAPQNMTD bmy_09685T0/1-684 LPAVRAMGLH LWAAGSETHP AGITDFLAEA SAEVDGPVPG YLSAPQNIMD BACU007488/1-478 LPTLRAMGLH LWAAGSETHP AGITDFLAEA SAEVDGPVPG YLSAPQNIMD ENSTTRP00000014011/1-808 LPALRAMGLH LWAAGSETHP AGITDFLAEA SAEVDGPVPG YLSAPQNIMD 651 700 ENSP00000357650/1-730 TCLYIFTSGT TGLPKAARIS HLKILQCQGF YQLCGVHQED VIYLALPLYH ENSBTAP00000049243/1-677 TCLYIFTSGT TGLPKAARIS HLKILQCQAF YQLCGAHQED VIYLALPLYH bmy_09685T0/1-684 TCLYIFTSGT TGLPKAARIS HLKVLQCQGF YQLCGAHQQD VIYLALPLYH BACU007488/1-478 TCLYIFTSGT TGLPKAARIS HLKVLQCQGF YQLCGAHQED VIYLALPLYH ENSTTRP00000014011/1-808 TCLYIFTSGT TGLPKAARIS HLKVLQCQGF YQLCGAHQED VIYLALPLYH 701 750 ENSP00000357650/1-730 MSGSLLGIVG CMGIGATVVL KSKFSAGQFW EDCQQHRVTV FQYIGELCRY ENSBTAP00000049243/1-677 MSGSLLGIVG CLGIGATVVL KSKFSAGQFW EDCQQHRVTV FQYIGELCRY bmy_09685T0/1-684 MSGSLLGI-- ---------- -SKFSAGQFW EDCQQHGVTV FQYIGELCRY BACU007488/1-478 MSGSLLGIVG CLGIGATVVL KSKFSAGQFW EDCQQHGVTV FQYIGELCRY ENSTTRP00000014011/1-808 MSGSLLGIVG CLGIGATVVL KSKFSAGQFW EDCQQHGVTV FQYIGELCRY 751 800 ENSP00000357650/1-730 LVNQPPSKAE RGHKVRLAVG SGLRPDTWER FVRRFGPLQV LETYGLTEGN ENSBTAP00000049243/1-677 LVNQPPNKAE RGHKVRLVVG SGLRPDTWER FVRRFGPLQV LETYGLTEGN bmy_09685T0/1-684 LVNQPLNKAE HGHKVRLVVG SGLRPDTWER FVRRFGPLQV LETYGLTEGN BACU007488/1-478 LVNQPPNKAE HGHKVRLVVG SGLRPDTWER FVRRFGPLQV LETYGLTEGN ENSTTRP00000014011/1-808 LVNQPPSKAE HGHKVRLVVG SGLRPDTWER FVRRFGPLQV LETYGLTEGN 801 850 ENSP00000357650/1-730 VATINYTGQR GAVGRASWLY KHIFPFSLIR YDVTTGEPIR DPQGHCMATS ENSBTAP00000049243/1-677 VATFNYTGQQ GAVGRASWLY KHVFPFSLIR YDVTTGEPVR DTQGHCVATS bmy_09685T0/1-684 VATFNYTGQR GAVGRASWLY KHFFPFSLIR YDVTTGEPIR NTQGLCVATS BACU007488/1-478 VATFNYTGQR GAVGRASWLY KHVFPFSLIR YDVTTGEPIR NTQGLCVATS ENSTTRP00000014011/1-808 VATFNYTGQR GAVGRASWLY KHVFPFSLIR YDVTTGEPIR NTQGLCVATS 851 900 ENSP00000357650/1-730 P--------- ---------- ---------- --------GE PGLLVAPVSQ ENSBTAP00000049243/1-677 P--------- ---------- ---------- --------GE PGLLVAPVSQ bmy_09685T0/1-684 PGLCPGRVGR GGGAGWQRRI GLGECGGRQP PLTPVTLPGE PGLLVAPVNQ BACU007488/1-478 P--------- ---------- ---------- --------GE PGLLVAPVNQ ENSTTRP00000014011/1-808 P--------- ---------- ---------- --------GE PGLLVAPVNQ 901 950 ENSP00000357650/1-730 QSPFLGYAGG PELAQGKLLK DVFRPGDVFF NTGDLLVCDD QGFLRFHDRT ENSBTAP00000049243/1-677 QSPFLGYAGG PELARGKLLK HVFQPGDVFF NTGDLLVCDN QGFLRFHDRT bmy_09685T0/1-684 QSPFLGYAGG PELARGKLLK DVFQPGDVFF NTGDLLVCDD QGFLRFHDRT BACU007488/1-478 QSPFLGYAGG PELARGKLLK DVFQPGDVFF NTGDLLVCDD QGFLRFHDRT ENSTTRP00000014011/1-808 QSPFLGYAGG PELARGKLLK DVFQPGDVFF NTGDLLVCDD QGFLRFHDRT 951 1000 ENSP00000357650/1-730 GDTFRWKGEN VATTEVAEVF EALDFLQEVN VYGVTVPGHE GRAGMAALVL ENSBTAP00000049243/1-677 GDTFRWKGEN VATTEVAEAL EALDFLQEVN VYGVTVPGHE GRAGMAALAL bmy_09685T0/1-684 GDTFRWKGEN VATTEVAEAL EALDFLQEVN VYGVTVPGHE GRAGMAALVL BACU007488/1-478 GDTFRWKGEN VATTEVAEAL EALDFLQEVN VYGVTVPGHE GRAGMAALVL ENSTTRP00000014011/1-808 GDTFRWKGEN VATTEVAEAL EALDFLQEVN VYGVTVPGHE GRAGMAALVL 1001 1050 ENSP00000357650/1-730 RPPHALDLMQ LYTHVSENLP PYARPRFLRL QESLATTETF KQQKVRMANE ENSBTAP00000049243/1-677 RPPHSLDLVQ LYAHVSENLP PYARPRFLRL QESLATTETF KQQKVRMAKE bmy_09685T0/1-684 RPPHSLDLVQ LYVHVSENLP PYARPRFLRL QESLATTETF KQQKVRMAKE BACU007488/1-478 RPPHSLDLVQ LYVHVSENLP PYARPRFLRL QESLATTETF KQQKVRMAKE ENSTTRP00000014011/1-808 RPPHSLDLVQ LYVRVSENLP PYARPRFLRL QESLATTETF KQQKVRMAKE 1051 1100 ENSP00000357650/1-730 GFDPSTLSDP LYVLDQAVGA YLPLTTARYS ALLAGNLRI ENSBTAP00000049243/1-677 GFDPSTLSDP LYILDQAGGA YLPLTPARYS ALLAGDLRI bmy_09685T0/1-684 GFDPSALSDP LYILDQAGGA YLPLTPARHS ALLAGDLRI BACU007488/1-478 GFDPSTLSDP LYILDQAGGA YLPLTPARYS ALLAGGLRI ENSTTRP00000014011/1-808 GFDPSALSDP LYILDQAGGA YLPLTPARYS ALLAGDLRI