KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:41 2014 Check: 00 .. Name: ENSTTRP00000007467/1-705 Len: 736 Check: 8834 Weight: 1.00 Name: ENSP00000348381/1-706 Len: 736 Check: 1026 Weight: 1.00 Name: ENSBTAP00000049254/1-674 Len: 736 Check: 1341 Weight: 1.00 Name: bmy_02800T0/1-736 Len: 736 Check: 6558 Weight: 1.00 Name: BACU004633/1-679 Len: 736 Check: 9119 Weight: 1.00 // 1 50 ENSTTRP00000007467/1-705 MSSDASQGVV TTSPPPSVPH KERYFDRINE NDPEYIRERN MSPDLRQDFN ENSP00000348381/1-706 MSSDASQGVI TTPPPPSMPH KERYFDRINE NDPEYIRERN MSPDLRQDFN ENSBTAP00000049254/1-674 MSSDASQGVV TTPPPPSMPH KERYFDRINE NDPEYIRERN MSPDLRQDFN bmy_02800T0/1-736 MSSDASQGVV TTPPPPSVPH KERYFDRINE NDPEYIRERN MSPDLRQDFN BACU004633/1-679 MSSDASQGVV TTPPPPSVPH KERYFDRINE NDPEYIRERN MSPDLRQDFN 51 100 ENSTTRP00000007467/1-705 MMEQRKRVTQ ILQSPAFRED LECLIQEQMK KGHNPTGLLA LQQIADYIMA ENSP00000348381/1-706 MMEQRKRVTQ ILQSPAFRED LECLIQEQMK KGHNPTGLLA LQQIADYIMA ENSBTAP00000049254/1-674 MMEQRKRVTQ ILQSPAFRED LECLIQEQMK KGHNPTGLLA LQQIADYIMT bmy_02800T0/1-736 MMEQRKRVTQ ILQSPAFRED LECLIQEQMK KGHNPTGLLA LQQIADYIMA BACU004633/1-679 MMEQRKRVTQ ILQSPAFRED LECLIQEQMK KGHNPTGLLA LQQIADYIMA 101 150 ENSTTRP00000007467/1-705 NSFSGFTSPP LS-------- ---------- ---------- --LGMVTPIN ENSP00000348381/1-706 NSFSGFSSPP LS-------- ---------- ---------- --LGMVTPIN ENSBTAP00000049254/1-674 SSFSGFTSPP LS-------- ---------- ---------- --LGMVTPIN bmy_02800T0/1-736 NSFSGFTSPP LSTFTNRSST NSNTSQIEEW YEKRHDGGNM QGLGMVTPIN BACU004633/1-679 NSFSGFTSPP LS-------- ---------- ---------- --LGMVTPIN 151 200 ENSTTRP00000007467/1-705 DLPGTDTSSY MKGEKLTRCK LASLYRLADL FGWAHLANTY ISVRISKEQD ENSP00000348381/1-706 DLPGADTSSY VKGEKLTRCK LASLYRLVDL FGWAHLANTY ISVRISKEQD ENSBTAP00000049254/1-674 DLPGADTSSY VKGEKLTRCK LASLYRLADL FGWAHLANTY ISVRISKEQD bmy_02800T0/1-736 DLPGTDTSSY MKGEKLTRCK LASLYRLADL FGWAHLANTY ISVRISKEQD BACU004633/1-679 DLPGTDTSSY MKGEKLTRCK LASLYRLADL FGWAHLANTY IS-------- 201 250 ENSTTRP00000007467/1-705 HIIIIPRGLS FSEATASNLX XXXXXXXXXX XXXXXXXXXX XXFSPHAAIY ENSP00000348381/1-706 HIIIIPRGLS FSEATASNLV KVNIIGEVVD QGSTNLKIDH TGFSPHAAIY ENSBTAP00000049254/1-674 HIIIIPRGLS FSEATASNLV KVNIIGEVVD QGSTNLKIDH AGFSPHAAIY bmy_02800T0/1-736 HIIIIPRGLS FSEATASNLV KVNIIGEVVD QGSTNLKIDH TGFSPHAAIY BACU004633/1-679 ---------- ---------V KVNIIGEVVD QGSTNLKIDH TGFSPHAAIY 251 300 ENSTTRP00000007467/1-705 STTSDVKCVI HIHT-ATAAV SSMKCGILPI SQESLILGDV AYYDYQGSLD ENSP00000348381/1-706 STRPDVKCVI HIHTLATAAV SSMKCGILPI SQESLLLGDV AYYDYQGSLE ENSBTAP00000049254/1-674 STRPDVKCVI HIHTLATAAV SSMKCGILPI SQESLILGDV AYYDYQGSLD bmy_02800T0/1-736 STRPDVKCVI HIHTLATAAV SSMKCGILPI SQESLILGDV AYYDYQGSLD BACU004633/1-679 STRPDVKCVI HIHTLATAAV SSMKCGILPI SQESLILGDV AYYDYQGSLD 301 350 ENSTTRP00000007467/1-705 EQEERIQLQK VLGPSCKVLV LRNHGVVALG ETIEEAFHXX XXXXXXXXXX ENSP00000348381/1-706 EQEERIQLQK VLGPSCKVLV LRNHGVVALG ETLEEAFHYI FNVQLACEIQ ENSBTAP00000049254/1-674 DQEERIQLQK VLGPSCKVLV LRNHGVVALG ETVEEAFHYI FNVQIACETQ bmy_02800T0/1-736 EQEERIQLQK VLGPSCKVLV LRNHGVVALG ETVEEAFHYI FNVQIACEIQ BACU004633/1-679 EQEERIQLQK VLGPSCKVLV LRNHGVVALG ETVEEAFHYI FNVQIACEIQ 351 400 ENSTTRP00000007467/1-705 VRALAGAGGV DNLLVLDLQK YKASTHAVAA SGGGGVNMGA HQKWKVGEIE ENSP00000348381/1-706 VQALAGAGGV DNLHVLDFQK YKAFTYTVAA SGGGGVNMGS HQKWKVGEIE ENSBTAP00000049254/1-674 VQALAGAGGV DNLLVLDLQK YKASTHTVAA SGGGGVNMGS HQKWKVGEIE bmy_02800T0/1-736 VRALAGAGGG DNLLVLDLQK YKASTHTVAA SGGGGVNMGS HQKWKVGEIE BACU004633/1-679 VRALAGAGGV DNLLVLDLQK YKASTHTVAA SGGGGVNMGS HQKWKVGEIE 401 450 ENSTTRP00000007467/1-705 FEGLMRTLDN LGYRTGYAYR HPLIREKPRH KSDVEIPATV TAFSFEDDTV ENSP00000348381/1-706 FEGLMRTLDN LGYRTGYAYR HPLIREKPRH KSDVEIPATV TAFSFEDDTV ENSBTAP00000049254/1-674 FEGLMRTLDN LGYRTGYAYR HPLIREKPRH KSDVEIPATV TAFSFEDDTV bmy_02800T0/1-736 FEGLMRTLDN LGYRTGYAYR HPLIREKPRH KSDVEIPATV TAFSFEDDTV BACU004633/1-679 FEGLMRTLDN LGYRTGYAYR HPLIREKPRH KSDVEIPATV TAFSFEDDTV 451 500 ENSTTRP00000007467/1-705 PLSPLKYMAQ RQQREKTRWL NSPNTYMKVN VPEESRNGET SPRTKITWMK ENSP00000348381/1-706 PLSPLKYMAQ RQQREKTRWL NSPNTYMKVN VPEESRNGET SPRTKITWMK ENSBTAP00000049254/1-674 PLSPLKYMAQ RQQREKTRWL NSPNTYMKVN VPEESRNGET SPRTKITWMK bmy_02800T0/1-736 PLSPLKYMAQ RQQREKTRWL NSPNTYMKVN VPEESRNGET SPRTKITWMK BACU004633/1-679 PLSPLKYMAQ RQQREKTRWL NSPNTYMKVN VPEESRNGET SPRTKITWMK 501 550 ENSTTRP00000007467/1-705 AEDSSKVSSG TPIKIEDPNQ FVPLNTNPNE VLEKRNKIRE QNRYDLKTAG ENSP00000348381/1-706 AEDSSKVSGG TPIKIEDPNQ FVPLNTNPNE VLEKRNKIRE QNRYDLKTAG ENSBTAP00000049254/1-674 AEDSSKVSSG TPIKIEDPNQ FVPLNTNPNE VLEKRNKIRE QNRYDLKTAG bmy_02800T0/1-736 TEDSSKVSSG TPIKIEDPNQ FVPLNTNPNE VLEKRNKIRE QNRYDLKTAG BACU004633/1-679 AEDSSKVSSG TPIKIEDPNQ FVPLNTNPNE VLEKRNKIRE QNRYDLKTAG 551 600 ENSTTRP00000007467/1-705 PQSQLLAGIV VDKPPSTMQF EDDDQAPPAP PNPFSHLTEG ELEEYKKAIE ENSP00000348381/1-706 PQSQLLAGIV VDKPPSTMQF EDDDHGPPAP PNPFSHLTEG ELEEYKRTIE ENSBTAP00000049254/1-674 PQSQLLAGIV VDKPPSTMQF EDDDHAPPAP PNPFSHLTEG ELEEYKRTVE bmy_02800T0/1-736 PQSQLLAGIV VDKPPSTMQF EDDDHAPPAP PNPFSHLTEG ELEEYKKAVE BACU004633/1-679 PQSQLLAGIV VDKPPSTMQF EDENHAPPAP PNPFSHLTEG ELEEYKKAVE 601 650 ENSTTRP00000007467/1-705 RKQQGLEDAE QELLSDDASS VSQIQSQTQS PQNIPEKLEE NHELFSKSFI ENSP00000348381/1-706 RKQQGLEDAE QELLSDDASS VSQIQSQTQS PQNVPEKLEE NHELFSKSFI ENSBTAP00000049254/1-674 RKQQG----- ---------- ---------- -------LEE NHELFSKSFI bmy_02800T0/1-736 RKQQGLEDAE QELLSDDASS VSQIQSQTQS LQNIPEKLEE NHELFSKSFI BACU004633/1-679 RKQQGLEDAE QELLSDDASS VSQIQSQTQS PQNIPEKLEE NHELFSKSFI 651 700 ENSTTRP00000007467/1-705 SMDMPVLIVN GKDDVHGVED ELAERVSRLT TSTTIENIEI TIKSPEKIEE ENSP00000348381/1-706 SMEVPVMVVN GKDDMHDVED ELAKRVSRLS TSTTIENIEI TIKSPEKIEE ENSBTAP00000049254/1-674 SMDVPVLIVN GKDDVHGVED ELAQRVSRLT TSTTIESIEI TIKSPEKIEE bmy_02800T0/1-736 SMDMPVLIVN GKDDVHGVED ELAERVSRLT TSTTIENIEI TIKSPEKIEE BACU004633/1-679 SMDMPVLIVN GKDDVHGVED ELAERVSRLT TSTTIENIEI TIKSPEKIEE 701 750 ENSTTRP00000007467/1-705 VLSPEGSPSK SPSKKKKKFR TPSFLKKNKK KEKVEA ENSP00000348381/1-706 VLSPEGSPSK SPSKKKKKFR TPSFLKKNKK KEKVEA ENSBTAP00000049254/1-674 VLSPEGSPSK SPSKKKKKFR TPSFLKKNKK KEKVEA bmy_02800T0/1-736 VLSPEGSPSK SPSKKKKKFR TPSFLKKNKK KEKVEA BACU004633/1-679 VLSPEGSPSK SPSKKKKKFR TPSFLKKNKK KEKVEA