KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:42 2014 Check: 00 .. Name: ENSBTAP00000049263/1-221 Len: 233 Check: 3615 Weight: 1.00 Name: bmy_07561T0/1-191 Len: 233 Check: 4749 Weight: 1.00 Name: ENSP00000366565/1-233 Len: 233 Check: 2396 Weight: 1.00 Name: BACU018548/1-201 Len: 233 Check: 9580 Weight: 1.00 Name: ENSTTRP00000001823/1-205 Len: 233 Check: 7 Weight: 1.00 // 1 50 ENSBTAP00000049263/1-221 MFHGIPATPG MGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ bmy_07561T0/1-191 ---------- -----MRP-- ---------- ---LRYDNMA ELFAVVKTMQ ENSP00000366565/1-233 MFHGIPATPG IGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ BACU018548/1-201 MFHGIPATPG MGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ ENSTTRP00000001823/1-205 MFHGIPATPG MGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ 51 100 ENSBTAP00000049263/1-221 ALEKAYIKDC VTPNEYTAAC SRLLVQYKAA FRQVQGSEIS SIDEFCRKFR bmy_07561T0/1-191 ALEKAYIKDC VSPNEYTAAC SRLLVQYKAA FRQVQGSEVS SIDEFCRKFR ENSP00000366565/1-233 ALEKAYIKDC VSPSEYTAAC SRLLVQYKAA FRQVQGSEIS SIDEFCRKFR BACU018548/1-201 ALEKAYIKDC VSPNEYTAAC SRLLVQYKAA FRQVQGSEVS SIDEFCRKFR ENSTTRP00000001823/1-205 ALEKAYIKDC VSPNEYTAAC SRLLVQYKAA FRQVQGSEIS SIDEFCRKFR 101 150 ENSBTAP00000049263/1-221 LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSVRITNS MDMSLNIKKQ bmy_07561T0/1-191 LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSLFITVM DKLRLEIRAM ENSP00000366565/1-233 LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSLFITVM DKLRLEIRAM BACU018548/1-201 LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSLFITVM DKLRLEIRAM ENSTTRP00000001823/1-205 LDCPLAMERI KEDRPITIKD DKGNLNRCIA DVVSLFITVM DKLRLEIRAM 151 200 ENSBTAP00000049263/1-221 NKTKKDVQLF LKTSNYLKTS PTRFSGAQKV SRVLQTLSGM SASDELDDSQ bmy_07561T0/1-191 DEIQPDLREL METMHRMSHL PPDFEGRQTV SQWLQTLSGM SASDELDDSQ ENSP00000366565/1-233 DEIQPDLREL METMHRMSHL PPDFEGRQTV SQWWVSLPAR QSPAVPETLP BACU018548/1-201 DEIQPDLREL METMHRMSHL PPDFEGRQTV SQ-------- ---------- ENSTTRP00000001823/1-205 DEIQPDLREL METMHRMSHL PD-FEGRQTV SQWV------ ---------- 201 250 ENSBTAP00000049263/1-221 VR-------- -QMLFDLESA YNAFNRFLHA --- bmy_07561T0/1-191 VR-------- -QMLFDLESA YNAFNRFLHA --- ENSP00000366565/1-233 ARRSPAVPLR PSAPTCPVLH SQAADPERHV GVR BACU018548/1-201 ---------- ----CSVLCA PQAADLERHV SLR ENSTTRP00000001823/1-205 ---------- -SLLSLPVSH PQAADLELHV SRR