KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:44 2014 Check: 00 .. Name: BACU004570/1-448 Len: 618 Check: 1001 Weight: 1.00 Name: ENSTTRP00000009950/1-615 Len: 618 Check: 7218 Weight: 1.00 Name: bmy_11667T0/1-378 Len: 618 Check: 4331 Weight: 1.00 Name: ENSBTAP00000049384/1-611 Len: 618 Check: 3091 Weight: 1.00 Name: ENSP00000435517/1-447 Len: 618 Check: 3698 Weight: 1.00 // 1 50 BACU004570/1-448 MASRGARQRL KGSGGSGGDT ASAADKLREL LCSREAGSAE PRPELSGNKA ENSTTRP00000009950/1-615 MASRGARQRL KGSGGSGGDT TSAADKLREL LCSREAGSAE PRPELSGNKA bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049384/1-611 MASRGARQRL KGSGGSGGDT ASAADKLREL LCSREAGSAE PRPELSGNKA ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ---------- 51 100 BACU004570/1-448 GQVWAPEGST AFKCLLSARL CAALLSNISD CDETFNYWEP THYLIYGKGF ENSTTRP00000009950/1-615 GQVWAPEGST AFKCLLSARL CAALLSNISD CXXXXXXXXX THYLIYGKGF bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049384/1-611 GQVWAPEGST AFKCLLSARL CAALLSNISD CDETFNYWEP THYLIYGKGF ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ---------- 101 150 BACU004570/1-448 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKILVFY FLRCLLAFVS ENSTTRP00000009950/1-615 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKXXXXX XXXXXXXXXX bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049384/1-611 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKILVFY FLRCLLAFVS ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ---------- 151 200 BACU004570/1-448 CICELYFYKA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT ENSTTRP00000009950/1-615 XXXXXXXXXA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT bmy_11667T0/1-378 ---------- ---------- -MMLAFLVLS TGMFCSSSAF LPSSFCMYTT ENSBTAP00000049384/1-611 CICELYFYKA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT ENSP00000435517/1-447 ---------- ---------- -MMLAFLVLS TGMFCSSSAF LPSSFCMYTT 201 250 BACU004570/1-448 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS ENSTTRP00000009950/1-615 LIAMTGWYMD KTSFAVLGVA AGAIL-WPFS AALGLPIAFD LLVMKHRWKS bmy_11667T0/1-378 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS ENSBTAP00000049384/1-611 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLIMKQRWKS ENSP00000435517/1-447 LIAMTGWYMD KTSIAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS 251 300 BACU004570/1-448 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGI ENSTTRP00000009950/1-615 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT bmy_11667T0/1-378 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGI ENSBTAP00000049384/1-611 FFHWSLVALV LFLVPVVGID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT ENSP00000435517/1-447 FFHWSLMALI LFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT 301 350 BACU004570/1-448 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFH- ---------E ENSTTRP00000009950/1-615 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT bmy_11667T0/1-378 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT ENSBTAP00000049384/1-611 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT ENSP00000435517/1-447 EPWYFYLING FLNFNVAFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT 351 400 BACU004570/1-448 MLPLRV---- ---------- ---SAIPPGA LYCDIELAGV ---------- ENSTTRP00000009950/1-615 LAPMYIWFII FFIQPHKEER FLFPVYPLVC LCGAVALSAL QR--FLSFKC bmy_11667T0/1-378 LAPMYIWFII FFIQPHKEER FLFPVYPLVC LCGAVALSAL -------QKC ENSBTAP00000049384/1-611 LAPMYIWFII FFIQPHKEER FLFPVYPLIC LCGAVALSAL -------QKC ENSP00000435517/1-447 LAPMYIWFII FFIQPHKEER FLFPVYPLIC LCGAVALSAL QHSFLYFQKC 401 450 BACU004570/1-448 ---------- ------GNTL PVWALIFFSL CGTVQS---- ---------- ENSTTRP00000009950/1-615 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RXXXXXXXXX bmy_11667T0/1-378 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RGYHGPLDLY ENSBTAP00000049384/1-611 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RGYHGPLDLY ENSP00000435517/1-447 YHFVFQRYRL EHYTVTSNWL ALGTVFLFGL LSFSRSVALF RGYHGPLDLY 451 500 BACU004570/1-448 ---------- ---------- ---------- ---------- -WQLQFIPSE ENSTTRP00000009950/1-615 XXXXXXATDP TIHTVPKGRP VYVCVGKEWY RFPSSFLLPD NWQLQFIPSE bmy_11667T0/1-378 PEFHRIATDP TIHTVPEGRP VNVCVGKEWY RFPSSFLLPD NWQLQFIPSE ENSBTAP00000049384/1-611 PEFYRIATDP TIHSVPEGRP VNVCVGKEWH RFPSSFLLPD NWQLQFIPSE ENSP00000435517/1-447 PEFYRIATDP TIHTVPEGRP VNVCVGKEWY RFPSSFLLPD NWQLQFIPSE 501 550 BACU004570/1-448 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYV----- ---------- ENSTTRP00000009950/1-615 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYIDINKC HYLVDLDTMR bmy_11667T0/1-378 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYV----- ---------- ENSBTAP00000049384/1-611 FRGQLPKPFA EGPLATRTVP TDMNDQNLEE PSRYIDISKC HYLVDLDTMR ENSP00000435517/1-447 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYIDISKC HYLVDLDTMR 551 600 BACU004570/1-448 ---------- ---------- ---------- RALFSFY--Y FEKSSTLKIC ENSTTRP00000009950/1-615 ETPREPKYSS NREEWINLAY RPFLDASRSS KLLRAFYVPF LSDQYTVYAN bmy_11667T0/1-378 ---------- ---------- ---------- RALFSFY--Y FEKSSTLKIC ENSBTAP00000049384/1-611 ETPREPKYSS NREEWINLAY RPFLDASRSS RLLRAFYVPF LSDQYTVYAN ENSP00000435517/1-447 ETPREPKYSS NKEEWISLAY RPFLDASRSS KLLRAFYVPF LSDQYTVYVN 601 650 BACU004570/1-448 WHT------- -------- ENSTTRP00000009950/1-615 YTILKPRKGK QIRKKSGG bmy_11667T0/1-378 WHT------- -------- ENSBTAP00000049384/1-611 YTILKPRKAK QTRKRSGG ENSP00000435517/1-447 YTILKPRKAK QIRKKSGG