KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:59:44 2014 Check: 00 ..
Name: BACU004570/1-448 Len: 618 Check: 1001 Weight: 1.00
Name: ENSTTRP00000009950/1-615 Len: 618 Check: 7218 Weight: 1.00
Name: bmy_11667T0/1-378 Len: 618 Check: 4331 Weight: 1.00
Name: ENSBTAP00000049384/1-611 Len: 618 Check: 3091 Weight: 1.00
Name: ENSP00000435517/1-447 Len: 618 Check: 3698 Weight: 1.00
//
1 50
BACU004570/1-448 MASRGARQRL KGSGGSGGDT ASAADKLREL LCSREAGSAE PRPELSGNKA
ENSTTRP00000009950/1-615 MASRGARQRL KGSGGSGGDT TSAADKLREL LCSREAGSAE PRPELSGNKA
bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049384/1-611 MASRGARQRL KGSGGSGGDT ASAADKLREL LCSREAGSAE PRPELSGNKA
ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ----------
51 100
BACU004570/1-448 GQVWAPEGST AFKCLLSARL CAALLSNISD CDETFNYWEP THYLIYGKGF
ENSTTRP00000009950/1-615 GQVWAPEGST AFKCLLSARL CAALLSNISD CXXXXXXXXX THYLIYGKGF
bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049384/1-611 GQVWAPEGST AFKCLLSARL CAALLSNISD CDETFNYWEP THYLIYGKGF
ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ----------
101 150
BACU004570/1-448 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKILVFY FLRCLLAFVS
ENSTTRP00000009950/1-615 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKXXXXX XXXXXXXXXX
bmy_11667T0/1-378 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000049384/1-611 QTWEYSPAYA IRSYAYLLLH AWPAAFHARI LQTNKILVFY FLRCLLAFVS
ENSP00000435517/1-447 ---------- ---------- ---------- ---------- ----------
151 200
BACU004570/1-448 CICELYFYKA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT
ENSTTRP00000009950/1-615 XXXXXXXXXA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT
bmy_11667T0/1-378 ---------- ---------- -MMLAFLVLS TGMFCSSSAF LPSSFCMYTT
ENSBTAP00000049384/1-611 CICELYFYKA VCKKFGLHVS RMMLAFLVLS TGMFCSSSAF LPSSFCMYTT
ENSP00000435517/1-447 ---------- ---------- -MMLAFLVLS TGMFCSSSAF LPSSFCMYTT
201 250
BACU004570/1-448 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS
ENSTTRP00000009950/1-615 LIAMTGWYMD KTSFAVLGVA AGAIL-WPFS AALGLPIAFD LLVMKHRWKS
bmy_11667T0/1-378 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS
ENSBTAP00000049384/1-611 LIAMTGWYMD KTSFAVLGVA AGAILGWPFS AALGLPIAFD LLIMKQRWKS
ENSP00000435517/1-447 LIAMTGWYMD KTSIAVLGVA AGAILGWPFS AALGLPIAFD LLVMKHRWKS
251 300
BACU004570/1-448 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGI
ENSTTRP00000009950/1-615 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT
bmy_11667T0/1-378 FFHWSLVALM IFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGI
ENSBTAP00000049384/1-611 FFHWSLVALV LFLVPVVGID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT
ENSP00000435517/1-447 FFHWSLMALI LFLVPVVVID SYYYGKLVIA PLNIVLYNVF TPHGPDLYGT
301 350
BACU004570/1-448 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFH- ---------E
ENSTTRP00000009950/1-615 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT
bmy_11667T0/1-378 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT
ENSBTAP00000049384/1-611 EPWYFYLING FLNFNVVFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT
ENSP00000435517/1-447 EPWYFYLING FLNFNVAFAL ALLVLPLTSL MEYLLQRFHV QNLGHPYWLT
351 400
BACU004570/1-448 MLPLRV---- ---------- ---SAIPPGA LYCDIELAGV ----------
ENSTTRP00000009950/1-615 LAPMYIWFII FFIQPHKEER FLFPVYPLVC LCGAVALSAL QR--FLSFKC
bmy_11667T0/1-378 LAPMYIWFII FFIQPHKEER FLFPVYPLVC LCGAVALSAL -------QKC
ENSBTAP00000049384/1-611 LAPMYIWFII FFIQPHKEER FLFPVYPLIC LCGAVALSAL -------QKC
ENSP00000435517/1-447 LAPMYIWFII FFIQPHKEER FLFPVYPLIC LCGAVALSAL QHSFLYFQKC
401 450
BACU004570/1-448 ---------- ------GNTL PVWALIFFSL CGTVQS---- ----------
ENSTTRP00000009950/1-615 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RXXXXXXXXX
bmy_11667T0/1-378 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RGYHGPLDLY
ENSBTAP00000049384/1-611 YHFVFQRYRL EHYTVTSNWL ALGTLFLFGL LSFSRSVALF RGYHGPLDLY
ENSP00000435517/1-447 YHFVFQRYRL EHYTVTSNWL ALGTVFLFGL LSFSRSVALF RGYHGPLDLY
451 500
BACU004570/1-448 ---------- ---------- ---------- ---------- -WQLQFIPSE
ENSTTRP00000009950/1-615 XXXXXXATDP TIHTVPKGRP VYVCVGKEWY RFPSSFLLPD NWQLQFIPSE
bmy_11667T0/1-378 PEFHRIATDP TIHTVPEGRP VNVCVGKEWY RFPSSFLLPD NWQLQFIPSE
ENSBTAP00000049384/1-611 PEFYRIATDP TIHSVPEGRP VNVCVGKEWH RFPSSFLLPD NWQLQFIPSE
ENSP00000435517/1-447 PEFYRIATDP TIHTVPEGRP VNVCVGKEWY RFPSSFLLPD NWQLQFIPSE
501 550
BACU004570/1-448 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYV----- ----------
ENSTTRP00000009950/1-615 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYIDINKC HYLVDLDTMR
bmy_11667T0/1-378 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYV----- ----------
ENSBTAP00000049384/1-611 FRGQLPKPFA EGPLATRTVP TDMNDQNLEE PSRYIDISKC HYLVDLDTMR
ENSP00000435517/1-447 FRGQLPKPFA EGPLATRIVP TDMNDQNLEE PSRYIDISKC HYLVDLDTMR
551 600
BACU004570/1-448 ---------- ---------- ---------- RALFSFY--Y FEKSSTLKIC
ENSTTRP00000009950/1-615 ETPREPKYSS NREEWINLAY RPFLDASRSS KLLRAFYVPF LSDQYTVYAN
bmy_11667T0/1-378 ---------- ---------- ---------- RALFSFY--Y FEKSSTLKIC
ENSBTAP00000049384/1-611 ETPREPKYSS NREEWINLAY RPFLDASRSS RLLRAFYVPF LSDQYTVYAN
ENSP00000435517/1-447 ETPREPKYSS NKEEWISLAY RPFLDASRSS KLLRAFYVPF LSDQYTVYVN
601 650
BACU004570/1-448 WHT------- --------
ENSTTRP00000009950/1-615 YTILKPRKGK QIRKKSGG
bmy_11667T0/1-378 WHT------- --------
ENSBTAP00000049384/1-611 YTILKPRKAK QTRKRSGG
ENSP00000435517/1-447 YTILKPRKAK QIRKKSGG