KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:45 2014 Check: 00 .. Name: ENSP00000349929/1-435 Len: 548 Check: 1533 Weight: 1.00 Name: ENSBTAP00000049441/1-359 Len: 548 Check: 1552 Weight: 1.00 Name: bmy_14807T0/1-472 Len: 548 Check: 6404 Weight: 1.00 Name: ENSTTRP00000007167/1-430 Len: 548 Check: 2518 Weight: 1.00 // 1 50 ENSP00000349929/1-435 ---------- ---------- ---------- ---MSGYQRR PGATPLSRAR ENSBTAP00000049441/1-359 ---------- ---------- ---------- ---MAGYARR PGVTPLSRAR bmy_14807T0/1-472 DGGGQLGPRP GRSRSHGAAA AGLGRAGAAG PAAMAGYARR PGVTPLSRAR ENSTTRP00000007167/1-430 ---------- ---------- ---------- ---MAGYARR PGVAPLSRAR 51 100 ENSP00000349929/1-435 SLAIPDAPAF YERRSCLPQL NCERPHGRDL DSPFFGIRPA FMCYVPSPVL ENSBTAP00000049441/1-359 SLVIPD---- ---------- ---------- ---------- ---------- bmy_14807T0/1-472 SLVIPD---- ---------- ---------- ---------- ---------- ENSTTRP00000007167/1-430 SLVIPDAPAF YERRSCLPQL DCERPQARDL ESHFFGIRPT FMCYVPSPVL 101 150 ENSP00000349929/1-435 ASVGDTDFGY GKGKCSKQSP SGAHGTHFGD DRFEDLEEAN PFSFREFLKT ENSBTAP00000049441/1-359 ---------- ---------- ---------D DKLGDLEAAN PFSFKEFLKT bmy_14807T0/1-472 ---------- ---------- ---------G EKLGDLEEAN PFSFKEFLKS ENSTTRP00000007167/1-430 ASVGDTDLGY GKGKGTMHGP SGAQNTHFGG EKLGDLEEAN PFSFKEFLKS 151 200 ENSP00000349929/1-435 KNLGLSKEDP ASRIYAKEAS RHSLGLDHNS PPSQTGGYGL EYQQPFFEDP ENSBTAP00000049441/1-359 KNLSLSKEDT DSRVYSQEAT RHSLGLDRTS PASQTVGYGL EYQQPFFEDP bmy_14807T0/1-472 KNLGLSKENT DSRIYSKEAT RHSLGLDRNS PTSQTVGYGL EYQQPFFEDP ENSTTRP00000007167/1-430 KNLGLWKEDT DSRIYSKEAT RHSLGLGRSS PTSQAMGYGL EHQQPFFEDP 201 250 ENSP00000349929/1-435 TGAGDLLDEE EDEDTGWSGA YLPSAIEQTH PERVPAGTSP CSTYLSFFST ENSBTAP00000049441/1-359 TGAGDLLDED EDEEDGWNGA YLPSAMEQTH SSRVAASTSP CSTYVSFFSN bmy_14807T0/1-472 TGAGDVLDED EDEDEGWDGA YLPSAVEQTH SSRVTASTSP CSTYVSFFSN ENSTTRP00000007167/1-430 TGAGDLLDED EDE--GWDGA YLPSAVEQTH SSRVAASTSP CSTYVSFFSN 251 300 ENSP00000349929/1-435 PSELAGPESL PSWALSDTDS RVSPASPAGS PSADFAVHGE SLGDRHLRTL ENSBTAP00000049441/1-359 PSELVGPESL PPWTLSDSDS RI---SPTGS PSADFTAHGE SLGDRHLRTL bmy_14807T0/1-472 PSELVGPESL PPCTLSDSDS RV---SPAGS PSTDFTVPGE SLGDRHLRTL ENSTTRP00000007167/1-430 PSELVGPESL PPCMLSDSDS RV---SPAGS PSTDFTVHGE SLGDRHLRTL 301 350 ENSP00000349929/1-435 QISYDALKDE NSKLRRKLNE VQSFSEAQTE MVRTLERKLE AKMIKEESDY ENSBTAP00000049441/1-359 QISYEALKDE NSKLRRKLTE IQSFSETQTE MVRTLERKLE AKMIKEESDY bmy_14807T0/1-472 QMSYEALKDE NSKLRRKLTE VQSFSETQTE MVRTLERKLE AKMIKEERDY ENSTTRP00000007167/1-430 QISYEALKDE NSKLRRKLTE VQSFSETQTE MVRTLERKLE AKMIKEESDY 351 400 ENSP00000349929/1-435 HDLESVVQQV EQNLELMT-- ---------- ---------K RAVKAENHVV ENSBTAP00000049441/1-359 HDLESVVQQV EQNLELMT-- ---------- ---------K RAVKAENHVL bmy_14807T0/1-472 HDLESAAQQV ERNLERATGT ESCPGGTWVW VGPPGRGRQK RAVKAENHVL ENSTTRP00000007167/1-430 HDLESVVQQV EQNLERMT-- ---------- ---------K RAVKAENHVL 401 450 ENSP00000349929/1-435 KLKQEISLL- ---------- ---------- ---------- ---------- ENSBTAP00000049441/1-359 KLRQEVSLL- ---------- ---------- ---------- ---------- bmy_14807T0/1-472 KLKQEISLLQ MKHLNQDSVS SPPGPPGCAQ HECRGHHYTA GGGTRTPEDS ENSTTRP00000007167/1-430 KLKQEISLL- ---------- ---------- ---------- ---------- 451 500 ENSP00000349929/1-435 ---------- --------QA QVSNFQRENE ALRCGQGASL TVVKQNADVA ENSBTAP00000049441/1-359 ---------- --------QA QVSDFKRENE ALRSGQGASL TVVKQNTDVA bmy_14807T0/1-472 QEKVLTLPRP PPYPPPRAQA QVSNFMRENE ALRSGQGASL TVVKQNTEVA ENSTTRP00000007167/1-430 ---------- --------QA QVSNFKHENE ALRSGQGASL AVVKQNTDVA 501 550 ENSP00000349929/1-435 LQNLRVVMNS AQASIKQLVS GAETLNLVAE ILKSIDRISE VKDEEEDS ENSBTAP00000049441/1-359 LQNLRVVMNN AHASIKQLVS GAETLNLVAE ILKSIDRISE IKDQGEES bmy_14807T0/1-472 LQNLRVVMNN AHASIKQLVS GAETLNLVAE ILKSIDRISE IKDQGEKS ENSTTRP00000007167/1-430 LQNLRVVMNN ARASVKQLVS GAETLNLVAE ILKSIDRISE IKDQGEES