KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:48 2014 Check: 00 .. Name: ENSTTRP00000010155/1-274 Len: 576 Check: 5555 Weight: 1.00 Name: ENSP00000340088/1-379 Len: 576 Check: 7707 Weight: 1.00 Name: ENSBTAP00000049529/1-381 Len: 576 Check: 6379 Weight: 1.00 Name: bmy_06626T0/1-357 Len: 576 Check: 5834 Weight: 1.00 Name: BACU006557/1-573 Len: 576 Check: 6697 Weight: 1.00 // 1 50 ENSTTRP00000010155/1-274 ---------- ---------- ---------- ---------- ---------- ENSP00000340088/1-379 MGDSRRRSLG NQPSS----- ---------- ---------- ---------- ENSBTAP00000049529/1-381 MGDHQQNSFY NHHTS----- ---------- ---------- ---------- bmy_06626T0/1-357 MGDHQQSSLY SHRMS----- ---------- ---------- ---------- BACU006557/1-573 MQRPHATSLG SSQMPVTVWA TLRPPSLAGS PCRLHCLSAD LGLFSTKTLA 51 100 ENSTTRP00000010155/1-274 ---------- ---------- ---------- ---------- ---------- ENSP00000340088/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049529/1-381 ---------- ---------- ---------- ---------- ---------- bmy_06626T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU006557/1-573 EASGEHTVGV QQPSDKNWDP TGTRQIRPCE SSRSHTTIAR YTQDQASSFQ 101 150 ENSTTRP00000010155/1-274 ---------- ---------- ---------- ---------- ---------- ENSP00000340088/1-379 EAAGRSEREQ DGD------- ---------- ---------- ---------- ENSBTAP00000049529/1-381 EAEDQPERGQ DDV------- ---------- ---------- ---------- bmy_06626T0/1-357 EAEDQPERGQ DDD------- ---------- ---------- ---------- BACU006557/1-573 ESLPQEEEGE DEEWEPDSST GAPPSSAPGP KNHHIIKFGT NIDLSDAKRW 151 200 ENSTTRP00000010155/1-274 ---------- ---------- ---------- ---------- ---------- ENSP00000340088/1-379 ---------- ---------- ---------- ------PRGL QSSVYESRRV ENSBTAP00000049529/1-381 ---------- ---------- ---------- ------SLGL QGTIYENVGS bmy_06626T0/1-357 ---------- ---------- ---------- ------TLGL QGPKYEKRGS BACU006557/1-573 KPQLQELLKL PAFMRVTSTG NMLSHVGHTI LGMNTVQLYM KGPKYKKRGS 201 250 ENSTTRP00000010155/1-274 ---------- ---------- ---------- ---------- ---------- ENSP00000340088/1-379 TDPERQDLDN AELGPEDPEE ELPPEEVAGE EFPETLDPKE ALSELERVLD ENSBTAP00000049529/1-381 KDPKFQGLDD RDLKLEDQEE EIPPEEVAGE ESVDAQNPEE ALLELERVLE bmy_06626T0/1-357 RDPKYQGLDN GDLGLEDQEE ETSSEEVTGE EFVDAQNPKE ALAELERVLE BACU006557/1-573 RDPKYQGLDD GNLGLEEQEE ETSSEEVTGE EFVDAQNPEE ALAELERVLE 251 300 ENSTTRP00000010155/1-274 ---------- -RLSTSQRTP GTSVG--WER RKKRRLLELV KPKTNWQVLK ENSP00000340088/1-379 KDLEEDIPEI SRLSISQKLP STTMTKARKR RRRRRLMELA EPKINWQVLK ENSBTAP00000049529/1-381 KDVEEGVPEM RRLSISQRIP RTSTS--PER KKRRRLFELA KPKTNWQILK bmy_06626T0/1-357 KDAEEGVPEM SRLSISQRTP GTSVG--WER RKKRRLFELA KPKTNWQVLK BACU006557/1-573 KDAEEGVPEM SRLSISQRTP GTSVG--WER RRKRRLFELA KPKTNWQVLK 301 350 ENSTTRP00000010155/1-274 DRMGCCCRGY A-ISPHMRNL QFCVYWPSVY WTERFLEDTT LTITV----- ENSP00000340088/1-379 DRKGRCGKGY AWISPCKMSL HFCLCWPSVY WTERFLEDTT LTITV----- ENSBTAP00000049529/1-381 DRMGCCCRGH AWVSPRMRSL QFCIYWPSVY WTERFLEDTT LTITV----- bmy_06626T0/1-357 DR-------- ---------- ------PSVY WTERFLEDTT LTITV----- BACU006557/1-573 DRMGCCCRGY AWISPRMRNL QFCVYWPSVY WTERFLEDTT LTITVPESPA 351 400 ENSTTRP00000010155/1-274 ---------- ---------- ---------P XXXXXXXXXX XXXXXXXXXX ENSP00000340088/1-379 ---------- ---------- ---------P AVSRRVEELS RPKRFYLEYY ENSBTAP00000049529/1-381 ---------- ---------- ---------P EVSRRVEELA RPKRFYSEYY bmy_06626T0/1-357 ---------- ---------- ---------P EVSRRLEELA RPKRFYSEYY BACU006557/1-573 VSTEAPGAQA RSAEEPEPPF PPPLCALRSP EVSRRLEELA RPKRFYSEYY 401 450 ENSTTRP00000010155/1-274 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVSQVSRA ENSP00000340088/1-379 NNNRTTPVWP IPRSSLEYRA SSRLKELAAP KIRDNFWSMP MSEVSQVSRA ENSBTAP00000049529/1-381 NNNRTTSIWP IPRSTLEYRA SNRLRELATP KVRNNIWSIN MSEVSQVSRA bmy_06626T0/1-357 NNNRTTPIWP IPRSTLEYRA SSRLRELATP KVRNNIWSVH MSEVSQVSRA BACU006557/1-573 NNNRTTPIWP IPRSTLEYRA SSRLRELASP KVRNNIWSIH MSEVSQVSRA 451 500 ENSTTRP00000010155/1-274 ARMATPSLRI IQLAKPRAPA ALREEWDPMP KPKPHVSDYN RLLHLAMPKP ENSP00000340088/1-379 AQMAVPSSRI LQLSKPKAPA TLLEEWDPVP KPKPHVSDHN RLLHLARPKA ENSBTAP00000049529/1-381 AQMAIPSSRI IRLAKPKAPA TLLEEWDPVP KPKPHVSDYN RLLHLAMPKV bmy_06626T0/1-357 ARMATRSTRI IQLAKPRAPA TLLEEWDPMP KPKPHVSDYN RLLHLAMPKA BACU006557/1-573 ARMATPSPRI IQLAKPRAPA TLLEEWDPMP KPKPHVSDYN RLLHLAMPKA 501 550 ENSTTRP00000010155/1-274 QSDKCVSDRD ARWEVLEATK KAVASPRIVS LAKPKVRRDL NEDYDVRPLA ENSP00000340088/1-379 QSDKCVPDRD PRWEVLDVTK KVVASPRIIS LAKPKVRKGL NEGYDRRPLA ENSBTAP00000049529/1-381 QSDKCVPDRD PRWEVLEVTK KAVASPRILS LAKPRVRKDL NEGYDPSHVS bmy_06626T0/1-357 QSDKCVADRD PRWEVLEVTK KAVASPRIVS LAKPKVRRDL SEGYNPYRVS BACU006557/1-573 QSDKCVPDRN PRWEVLEVTR KAVASPRIVS LAKPKVRRDL SEGYNPYRVS 551 600 ENSTTRP00000010155/1-274 CKSLPPPRAS PKKHEQPRSG PS---- ENSP00000340088/1-379 SMSLPPPKAS PEKCDQPRPG L----- ENSBTAP00000049529/1-381 PAAL-VAQAS PRLYELATPK TITKKA bmy_06626T0/1-357 PASL-VARAS PRLYELATPK NVTKKA BACU006557/1-573 PASL-VARAS PRLYELATPK SVTKKA