KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:50 2014 Check: 00 .. Name: ENSBTAP00000049617/1-455 Len: 476 Check: 4866 Weight: 1.00 Name: ENSP00000230256/1-457 Len: 476 Check: 8919 Weight: 1.00 Name: ENSTTRP00000001081/1-453 Len: 476 Check: 7127 Weight: 1.00 Name: bmy_19422T0/1-476 Len: 476 Check: 7690 Weight: 1.00 Name: BACU011716/1-434 Len: 476 Check: 6176 Weight: 1.00 // 1 50 ENSBTAP00000049617/1-455 MEGNLKNVLV LSFGFLLLFT AYGGLQSLQV VLYTDGG-ST CSLRSQFSGI ENSP00000230256/1-457 MDRSLRNVLV VSFGFLLLFT AYGGLQSLQS SLYSEEGLGV TALSTLYGGM ENSTTRP00000001081/1-453 MERSLKNVLV LSFGFLLLFI AYGGLQSLQS SLYSEEGLGV AALSTLYGGM bmy_19422T0/1-476 MERSLKNILV LSFGFLLLFT AYGGLQSLQS SLYSEEGLGV AALSTLYGGM BACU011716/1-434 --------LA L--------- ------SPQS SLYSEEGLGV AALSTLYGAM 51 100 ENSBTAP00000049617/1-455 ASVPWVLPPT LLRALGCCKV LVWHVCCKFL FSVGHFHGPR YTLIPASVLV ENSP00000230256/1-457 LLSSMFLPPL LIERLGCKGT IILSMCGYVA FSVGNFFASW YTLIPTSILL ENSTTRP00000001081/1-453 LLSSMFLPPI LIKKLGCKWT IVIAMCCYVT FTLGNFYASW YTLIPTSILL bmy_19422T0/1-476 LLSSMFLPTI LIKKLGCKWT IVISMCCYVA FSLGNFYASW YTLIPTSILL BACU011716/1-434 LLSSLLLPPI LIAKLGCKWT IVISMCCYVA FSLGNFYASW YTLIPTSVLL 101 150 ENSBTAP00000049617/1-455 GLGAAALWSA QGTYLTIVGN MQARKTGQVG KDVVSQYFGI FFLIFQSSGV ENSP00000230256/1-457 GLGAAPLWSA QCTYLTITGN THAEKAGKRG KDMVNQYFGI FFLIFQSSGV ENSTTRP00000001081/1-453 GLGAAPLWSA QGTYLTTMGS THAEKTGKLG KDVVSQYFGI FFLIYQSAGG bmy_19422T0/1-476 GLGAAPLWSA QGTYLTIMGN THAEKTGKVS KDVVSQYFGI FFFIFQSSGV BACU011716/1-434 GLGAAPLWSA QGTYLTIMGN THAEKTGKVG KDVVSQYFGI FFLIFQSSGV 151 200 ENSBTAP00000049617/1-455 WGNLISSLVF GQMPTQGNRN ESVLHIRNLS LCL-DPLYCS STQVPAFRNM ENSP00000230256/1-457 WGNLISSLVF GQTPSQETLP EEQLTSCGAS DCLMATTTTN STQRPSQQLV ENSTTRP00000001081/1-453 FGNLISSLVF GQTPTQXXXP EEQL--CEAS DCM-TTASTN STNRPSQELI bmy_19422T0/1-476 WGNLISSLVF GQTPTQGAIP EEQLEFCGAS DCLVATASTN STNRPSQELI BACU011716/1-434 WGNLISSLVF GQTPTQGAIP EEQLESCGAS DCLGATASTN STNRPSQELI 201 250 ENSBTAP00000049617/1-455 QTMTGLFTGC GFLAVLLMAV FLEPVRDAQP EGEDEKQAPP FWSTLLSTFK ENSP00000230256/1-457 YTLLGIYTGS GVLAVLMIAA FLQPIRDVQR ESEGEKKSVP FWSTLLSTFK ENSTTRP00000001081/1-453 Y-LLGIYTGS GFLAVLLIAL FLEPIKDAQQ ESEGEKQASP FWSTLLSTAK bmy_19422T0/1-476 YTLLGIYTGS GFLAVLLTAV FLEPIKDAQQ KSEGEKQAPP FWSTLLSTVK BACU011716/1-434 YTLLGIYTGS GFLAVLLTAA FLEPIKDAEQ KSEGEKQAPP FWSTLLSTVK 251 300 ENSBTAP00000049617/1-455 LLRDKRLRLL ILLPMLSGFE QAFLSGDYTR SYTTCALGIQ FVGYVMICFG ENSP00000230256/1-457 LYRDKRLCLL ILLPLYSGLQ QGFLSSEYTR SYVTCTLGIQ FVGYVMICFS ENSTTRP00000001081/1-453 LFRDKRLCLL VLLPLYSGFQ QAFLAGDYTR SYITCALGIQ FVGYVMICFA bmy_19422T0/1-476 VFRDKRLCLL VLLPLYCGFQ QAFLAGDYTR SYTTCALGIQ FVGYVMICFS BACU011716/1-434 LFRDKRLCLL VLLPLYCGFQ QAFLAGDYTR SYTTCALGIQ FVGYVMICFS 301 350 ENSBTAP00000049617/1-455 AADALCSVLF GRLARHTGRT VLFALGAVTQ LACIIALLLW KPHPSQLPVF ENSP00000230256/1-457 ATDALCSVLY GKVSQYTGRA VLYVLGAVTH VSCMIALLLW RPRADHLAVF ENSTTRP00000001081/1-453 AVNALCSVLY GKLAQYTGRI ALFALGAVTH LSCIIALLLW KPHPRQLPLF bmy_19422T0/1-476 AVNALCSVLY GKLAQYTGRI ALFALGAVTH LSCFIALLLW KPHPHQLPLF BACU011716/1-434 AVNALCSVLY GKLAQYTGRI ALFALGAVTQ LSCFIALLLW KPHPRQLPLF 351 400 ENSBTAP00000049617/1-455 FVFPSLWGMA DAVWQTQNNA LFGVLFEKNK EAAFANYRLW EALGFVIAFG ENSP00000230256/1-457 FVFSGLWGVA DAVWQTQNNA LYGVLFEKSK EAAFANYRLW EALGFVIAFG ENSTTRP00000001081/1-453 FVFPGLWGAA DAVWQTQNNA LFGVLFEKNK EAAFASYRLW EALGFVIAFG bmy_19422T0/1-476 FALPGLWGVA DAVWQTQNNA LFGVLFEKNK EAAFASYRLW EALGYVIAFG BACU011716/1-434 FVFPGLWGMA DAVWQTQNNA LFGVLFEKNK EAAFASYRLW EALGYVIAFG 401 450 ENSBTAP00000049617/1-455 YSTFLCVSVK LYVLLGVLSA AMAAYGAVEY TESRKADGPL AAGRTKPAED ENSP00000230256/1-457 YSMFLCVHVK LYILLGVLSL TMVAYGLVEC VESKNPIRPH APGQVNQAED ENSTTRP00000001081/1-453 YSMFLCVSVK LYVLLGVLSL AMAAYGTVEY LGSKKVARLR TEEQTKPAEE bmy_19422T0/1-476 YSTFLCVSVK LYVLLGVLSL AMVAYGTVEY LGSKKVARLL TEEQTKPAEE BACU011716/1-434 YSTFLCVSVK LYVLLGVLSL AMAAYGTVEY LGSKKVARLL TEEQTKPAEE 451 500 ENSBTAP00000049617/1-455 GATQTKL--- ---------- ------ ENSP00000230256/1-457 EEIQTKM--- ---------- ------ ENSTTRP00000001081/1-453 GATQTEM--- ---------- ------ bmy_19422T0/1-476 GVNRQKCEAT NPMVDEPRAY RRESFT BACU011716/1-434 GVTQTKM--- ---------- ------