KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:54 2014 Check: 00 .. Name: BACU009048/1-165 Len: 241 Check: 9776 Weight: 1.00 Name: ENSP00000320757/1-233 Len: 241 Check: 360 Weight: 1.00 Name: ENSBTAP00000049701/1-235 Len: 241 Check: 9117 Weight: 1.00 Name: bmy_16786T0/1-230 Len: 241 Check: 5146 Weight: 1.00 Name: ENSTTRP00000000538/1-180 Len: 241 Check: 4017 Weight: 1.00 // 1 50 BACU009048/1-165 ---------- ---------- ---------- ---------- ---------- ENSP00000320757/1-233 MWGYLSLMPV FLAVWAISGV WIVFAIAVTN RTVDLSKGFP YISICGSFPP ENSBTAP00000049701/1-235 MWGYLSLLPM CLAFWAIAGI WTVFSLAVVN KAVNLTDGFP YISVCGNVPP bmy_16786T0/1-230 ---------- SYGAWGGGGS GGRKEGGPGS EELQDDRLSP PVDV-EIAPL ENSTTRP00000000538/1-180 ---------- ---------- ---------- ---------- ---------- 51 100 BACU009048/1-165 -MAVFKH--- ---------- -SPWS----- ---WSWRLPA RHRGPRPPTG ENSP00000320757/1-233 QSCIFSQVLN MGAAL----- -AAWICIVRY HQLRDWGVRR WPNQLILWTG ENSBTAP00000049701/1-235 QSCIFSQVLN IGAAS----- -AAWICILRY YQLRDWGVRK WHNQVILWTG bmy_16786T0/1-230 RAASSARSLG LGPPAHFPLL PAAWTCILRY QQLRDWGVGK WPNQLILWTG ENSTTRP00000000538/1-180 ----FSQVLN LGAAL----- -AAWTCILRY HQLRDWGVGK WPNQLILWTG 101 150 BACU009048/1-165 LPLNSAPFLS ---QEKNQRA THLTGAFFAF FVGIFYFWLQ LLLFWRVKSL ENSP00000320757/1-233 LLCALGTSVV GNFQEKNQRP THLAGAFLAF ILGNVYFWLQ LLL-WRLKRL ENSBTAP00000049701/1-235 LLCALGTSIV GNFQEKNQRA THLTGAFLAF FVGIVYFWLQ LFLSWRMKNL bmy_16786T0/1-230 LLCALGTSIV GNFQEKNQRA THLTGAFFAF FVGIFYFWLQ LLLFWRMKSL ENSTTRP00000000538/1-180 LLCTLGTSIV GNFQEKNQRA THLMGAFLAF FVGIFYFWLQ LLVFWRVKSL 151 200 BACU009048/1-165 PQPGAPWIGP LRLVLCSICT ILTVAMVVLH TWSLRSASAA CEWVVAMLLF ENSP00000320757/1-233 PQPGAAWIGP LRLGLCSVCT ILIVAMIVLH ACSLRSVSAA CEWVVAMLLF ENSBTAP00000049701/1-235 PQPGAPWIGP LRLVLCSACF ILEVAMVVLH SWSMRSVSAI CEWVAAMLLF bmy_16786T0/1-230 PQPGAPWIGP LRLVLCSICT ILTVAMVVLH TWSLRSASAA CEWVVAMLLF ENSTTRP00000000538/1-180 PQPGAPWIGP LRLLLCSICT ILTVAMVVLH TWSLRSASAA CEWVVAMLLF 201 250 BACU009048/1-165 TLFGLFAVDF SGLDSCTLCL QPVPGSPSPP PASPIALKVQ L ENSP00000320757/1-233 ALFGLLAVDF SALESCTLCV QPWP-SLSPP PASPISLPVQ L ENSBTAP00000049701/1-235 ILFGLLAVDF SRLDSCTLCL QPGSGSLRPP PDSPTSLHVQ L bmy_16786T0/1-230 ILFGLFAVDF SGLDGCTLCL QPGPGSLSPP PASPISLKVQ L ENSTTRP00000000538/1-180 ILFGLFAVDF SSLDGCTLCL QPGPGSLSPP PASPISLKVQ -