KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:56 2014 Check: 00 .. Name: ENSP00000307234/1-818 Len: 818 Check: 6945 Weight: 1.00 Name: ENSBTAP00000049713/1-818 Len: 818 Check: 4705 Weight: 1.00 Name: bmy_12371T0/1-818 Len: 818 Check: 5226 Weight: 1.00 Name: BACU015960/1-780 Len: 818 Check: 7838 Weight: 1.00 // 1 50 ENSP00000307234/1-818 MAGTRRKSLQ NRQVGSLLIF LCISVGDATT IRYSVAEEME SGSFVANVAK ENSBTAP00000049713/1-818 MATACRKLLQ SRQVETLLLF LCLSVGGAAT IRYSVAEEME SGSFVANVAK bmy_12371T0/1-818 MAIARRKLLQ SRQVGSLLLF LCLSVVGAAA IRYSVAEEME SGSFVANVAK BACU015960/1-780 ---------- ---------- ---------- --------ME SGSFVANVAK 51 100 ENSP00000307234/1-818 DLGLEVGKLA ARGARLVSEG NKMHFRLHRK TGDLFVKEKL DRESLCGKAD ENSBTAP00000049713/1-818 DLGLEVGKLA ARGARLVSEG NKLHFRLHRK TGDLFVKEKL DRESLCGKAD bmy_12371T0/1-818 DLGLEVGKLA ARRARLVSEG NILHFRLHRK TGDLFVKEKL DRESLCGKAD BACU015960/1-780 DLGLEVGKLA ARGARLVSEG NILHFRLHRK TGDLFVKEKL DRESLCGKAD 101 150 ENSP00000307234/1-818 PCVLHFEVVL VEPLQSFRAE VRVFDINDNA PVFLNKEPLL KIPESTPLGS ENSBTAP00000049713/1-818 PCVLHFEVVL VEPLQSFRVE VRVFDINDNA PVFLNKEPLL RIPESTPLGS bmy_12371T0/1-818 PCVLEFEIVL VEPLQSFRVE VRVFDINDNA PVFLNKEPLL KIPESTPLGS BACU015960/1-780 PCVLEFEIVL VEPLQSFRVQ VRVFDINDNA PVFLNKEPLL KIPESTPLGS 151 200 ENSP00000307234/1-818 RFPLQSAQDL DVGLNGLQNY TLSANGYFHL HTRFCSHGPK YAELVLNKPL ENSBTAP00000049713/1-818 RFPLQSAQDL DVGLNGLQNY TLSANEYFHL HTRFRSNGPK YAELVLDKPL bmy_12371T0/1-818 RFPLQSAQDL DVGLNGLQNY TLSASAYFHL HTRFRSHGPK YAELVLDKPL BACU015960/1-780 RFPLQSAQDL DVGLNGLQNY TLSTSEYFHL HTRFRSHGPK YAELVLDKPL 201 250 ENSP00000307234/1-818 DREEQPEVNL TITAVDGGSP PKSGTAHIHV VVLDVNDHVP QFSRLVYRAQ ENSBTAP00000049713/1-818 DREEQPEVNM TITAVDGGSP PKSGTAHIRV EVLDVNDHVP QFSRLVYRAQ bmy_12371T0/1-818 DREEQPEVNL TITAVDGGSP PKSGTAHIRV EVLDVNDHVP QFSRLVYRAQ BACU015960/1-780 DREEQPEVNL TITAVDGGSP PKSGTAHIRV QVLDVNDHVP QFSRLVYRAQ 251 300 ENSP00000307234/1-818 VSENSPNGSL VATVTAVDLD EGTNKAITYS LAQNPEAILK TFQIDPQNGE ENSBTAP00000049713/1-818 VPENSANGSL VATVTATDLD EGSNKEITYS LAQNPEVILQ TFQIHSETGE bmy_12371T0/1-818 VPENSANGSL VTTVTATDLD EGSNKEITYS LAQNPEVILQ TFQIDSETGE BACU015960/1-780 VLENSANGSL VATVTATDLD EGSNKEITYS LAQNPEVILQ TFQIDSETGE 301 350 ENSP00000307234/1-818 VRLRGPLDFE AIETYDIDIQ ATDGGGLSAH SKVLVEVVDV NDNPPEVMVS ENSBTAP00000049713/1-818 VRLRGPLDFE AIETYDIDIQ ATDGGGLSAH SKVLVEVVDV NDNPPEVTVS bmy_12371T0/1-818 VRLRGSLDFE AIETYDIDIQ ATDGGGLSAH SKVLVEVVDV NDNPPEVTVS BACU015960/1-780 VRLRGSLDFE AIETYDIDIQ ATDGGGLSAH SKVLVEVVDV NDNPPEVTVS 351 400 ENSP00000307234/1-818 SVSSPLPEDS PPQTVVALFT IRDRDIRVGG KVTCFLREDL PFVIKPTFGN ENSBTAP00000049713/1-818 SVSSPLPEDS PLQTVVALFS IRDRDIRVGG KITCFLKEDL PFAVKPTFRN bmy_12371T0/1-818 SVSSPLPEDS PLQTVVALFS IRDRDIRVGG KITCFLKEDL PFAVKPTFRN BACU015960/1-780 SVSSPLPEDS PLQTVVALFS IRDRDIRVGG KITCFLKEDL PFAVKPTFRN 401 450 ENSP00000307234/1-818 SYSLVTDRSL DREEVSGYNI TIVAMDTGPP SLSAETMIEV LISDVNDNPP ENSBTAP00000049713/1-818 SYSLVTDRGL DREAVSGYNI TLVAMDTGPP TLSSETVIEV LISDINDNPP bmy_12371T0/1-818 SYSLVTDRGM DREAVSGYNI TLVAMDTGPP TLSSETVIEV LISDINDNPP BACU015960/1-780 SYSLVTDRGM DREEVSGYNI TLVAMDTGTP TLSSETVIEV LISDINDNPP 451 500 ENSP00000307234/1-818 IFREDSYILT VRENNSPAVF IGKVHAEDLD LGENAQITYS LLPPKNGDLS ENSBTAP00000049713/1-818 VFQEDSYILT VRENNSPAVF IGKVLAEDLD LGENAKVTYS LLPPKSGDLS bmy_12371T0/1-818 VFQEDSYILT VRENNSPAVF IGKVHAEDLD LGENAQITYS LLPPKSGDLS BACU015960/1-780 VFQEDSYILT VPENNSPAVF IGKVHAEDLD LGENAQITYS LLPPKSGDLS 501 550 ENSP00000307234/1-818 VFAYISINSG NGKLYALRTM DYEAIQDFQF VVKATDGGFL SLSSQVTVRV ENSBTAP00000049713/1-818 VFAYISINSD NGKLYALRTM DYEAIQHFQF VVKATDGGFL SLSSQVTVRV bmy_12371T0/1-818 VFAXISINSD NGKLYALRTM DYEAIQDFQF VVKATDGGFL SLSSQVTVRV BACU015960/1-780 VFAYISINSD NGKLYALRTM DFEAIQDFQF VVKATDGGFL SLSSQVTVRV 551 600 ENSP00000307234/1-818 VVLDDNDNRP MILYPLQNGT LPCNDLVPRS AEAGYLVTKV VAVDGDSGQN ENSBTAP00000049713/1-818 VVLDDNDNRP MILYPLQNGT LPCNDLVPRS AEAGYLVTKV VAVDGDSGQN bmy_12371T0/1-818 VVLDDNDNCP MILYPLQNGT LPCNDLVPRS AEAGYLVTKV VAVDGDSGQN BACU015960/1-780 VVLDDNDNCP MILYPLQNGT LPCNDLVPRS AEAGYLVTKV VAVDGDSGQN 601 650 ENSP00000307234/1-818 SWLSYHLLKA TDLGLFSVQR QNGEIHTLRQ ISERDPMMQK LIILVQDHGQ ENSBTAP00000049713/1-818 SWLSYHLFKA TDLGLFSVQQ QNGEIRTLRQ VSERDPTMQK LVILVQDHGQ bmy_12371T0/1-818 SWLSYHLFKA TDPGLFSVQQ KNGEIRTLRQ ISERDPRMQK LIVLVQDYGQ BACU015960/1-780 SWLSYHLFKA TDPGLFSVQQ KNGEIRTLRQ ISERDPTMQK LIVLVQDHGQ 651 700 ENSP00000307234/1-818 PALSTTVSLN ILLVDGFSEP YLQFQDPTKH SRKVNPSTKY LVISLVILSF ENSBTAP00000049713/1-818 PALSTTASLN ILLVDGFSEP YLQFRDTFKH PTRVNPSTKY LVISLAVLSF bmy_12371T0/1-818 PALSTTASLN ILLVDGFSEP YLQFRDPFKH PTRVNPSTKY LVISLAVLSF BACU015960/1-780 PALSTTASLN ILLVDGFSEP YLQFRDPFKH PTRVNPSTKY LVISLAVLSF 701 750 ENSP00000307234/1-818 LFLLSVIVIF IIHVYQKIKY REKFTIQEHF YDDCNFSNNL VQGQGNGSLS ENSBTAP00000049713/1-818 LFLLSVTVIF IIHICQKIKH REKFTIQEHF YDDCNFSNNL VQGGASGPIL bmy_12371T0/1-818 LFLLSVTVIF ITHICQKIKY REKFTIQEHF YDDCNFSNNL VQGGASGSIS BACU015960/1-780 LFLLSVTVIF ITHICQKIKY REKFTIQEHF YDDCNFSNNL VQGEASGSIS 751 800 ENSP00000307234/1-818 RPCPYEMCSA TGTGNSEFRF LKRFMPNFPF PHATGEIKME AGSSLPPNSD ENSBTAP00000049713/1-818 QPCPYEMCSA TGTSNSEFRF LKRFMPNFPF PHGNGEAKTE ADSRLPPDSD bmy_12371T0/1-818 QPCPYEVSSA TGTGNCEFWF LKRLMPNFPF PHGTGEVKTE AGSSLPPDSD BACU015960/1-780 QPCPYEVSSA TGTGNSEFWF LKHLMPNFPF PHGTGEVKTE AGSSLPPDSD 801 850 ENSP00000307234/1-818 RNKSQRLEGH DQVSDDYM ENSBTAP00000049713/1-818 RNRSRGSEGH AQVSDDYM bmy_12371T0/1-818 RNRSRGSEGH AQVSDDHM BACU015960/1-780 RNRSWGSEGH AQVSDDYM