KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:57 2014 Check: 00 .. Name: ENSP00000420200/1-357 Len: 362 Check: 5616 Weight: 1.00 Name: ENSBTAP00000049744/1-353 Len: 362 Check: 9946 Weight: 1.00 Name: ENSTTRP00000013664/1-339 Len: 362 Check: 5975 Weight: 1.00 Name: bmy_11744T0/1-299 Len: 362 Check: 5955 Weight: 1.00 Name: BACU009301/1-362 Len: 362 Check: 54 Weight: 1.00 // 1 50 ENSP00000420200/1-357 -----MEKYV AAMVLSAAGD ALGYYNGKWE FLQDGEKIHR QLAQLGGLDA ENSBTAP00000049744/1-353 MCGALMERYV AAMVLSAAGD ALGYFNGKWE FLQNGEKIHR QLAQLGGLDA ENSTTRP00000013664/1-339 -----IKKYV AAMVLSAAGD ALGYFNGKWE FLRNGEKIHR QLAQLGGLDA bmy_11744T0/1-299 ---------- --------GD ALGYFNGKWE FLRNGEKIHR QLAQLGGLDA BACU009301/1-362 MSGELIKKYV AAMVLSAAGD ALGYFNGKWE FLRNGEKIHR QLAQLGGLDA 51 100 ENSP00000420200/1-357 LDVGRWRVSD DTVMHLATAE ALVEAGKAPK LTQLYYLLAK HYQDCMEDMD ENSBTAP00000049744/1-353 IDVERWRVSD DTVMHLATAE ALLEAGKVSD LTHLYSLLAK HYQDCMGDMD ENSTTRP00000013664/1-339 IDVERWRVSD DTVMHLATAD ALLEAGKVSD LAHLYSILAK HYQNCMGDMN bmy_11744T0/1-299 IDVERWRVSD DTVMHLATAD ALLEAGEGSD LAHL------ ---------- BACU009301/1-362 IDVERWRVSD DTVMHLATAD ALLEAGKVSD LAHLYSILAK HYQDCMGDMN 101 150 ENSP00000420200/1-357 GRAPGGASVH NAMQLKPGKP NGWRIPFNSH EGGCGAAMRA MCIGLRFPHH ENSBTAP00000049744/1-353 GRAPGGASVQ NAMLLEPDKA DGWRIPFNSH EGGCGAAMRA MCIGLRFPHS ENSTTRP00000013664/1-339 GRAPGGASMQ NAMLLEPDKA DGWRIPFNSH EGGCGAAVRA MCIGLRFPHH bmy_11744T0/1-299 ---------- ---------- ---------H EGGCGAAVRA MCIGLRFPHH BACU009301/1-362 GRAPGGASMQ NAMLLEPDKA DGWRIPFNSH EGGCGAAVRA MCIGLRFPHH 151 200 ENSP00000420200/1-357 SQLDTLIQVS IESGRMTHHH PTGYLGALAS ALFTAYAVNS RPPLQWGKGL ENSBTAP00000049744/1-353 SQLDSLIQVS IESGRMTHHH PTGYLGALVS ALFTAYAVNG KPPQQWGRGL ENSTTRP00000013664/1-339 SQLDTLIQVS VESGRMTHHH PTGFLGALVS ALFTAYAVNG KPPQQWGKGL bmy_11744T0/1-299 SQLDTLIQAS IESGRMTHHH PTGFLGALAS ALFTAYAVNG KPPQQWGKGL BACU009301/1-362 SQLDTLIQAS IESGRMTHHH PTGFLGALVS ALFTAYAVNG KPPQQWGKGL 201 250 ENSP00000420200/1-357 MELLPEAKKY IVQSGYFVEE NLQHWSYFQT KWENYLKLRG ILDGESAPTF ENSBTAP00000049744/1-353 MEVLPEAKKY IVQSGFFVEQ NLQHWSYFQD QWEKYLKLRG IWDGKSAPTF ENSTTRP00000013664/1-339 MEVLPEAKKY IVQSGYFVEQ NLQHWSYFQD QWKKYLKLRG IWDGRSAPTF bmy_11744T0/1-299 MEVLPEAKKY IVQSGYFVEQ NLQHWSYFQD QWKKYLKLRG IWDGRSAPTF BACU009301/1-362 MKVLPEAKKY IVQSGYFVEQ NLQHWSYFQD QWKKYLKLRG IWDGRSAPTF 251 300 ENSP00000420200/1-357 PESFGVKERD QFYTSLSYSG WGGSSGHDAP MIAYDAVLAA GDSWKELAHR ENSBTAP00000049744/1-353 PKPFDVKERD QFYSSVSYSG WGGSSGHDAP MIAYDAILAA GDSWKELAHR ENSTTRP00000013664/1-339 PKPFDVKERD QFYTSVSYSG WGGSSGHDAP MIAYDAILAA GDSWEELAHR bmy_11744T0/1-299 PKPFDVKERD EFYTSVSYSG WGGSSGHDAP MIAYDAILAA GDSWEELAHR BACU009301/1-362 PKPFDVKERD EFYTSVSYSG WGGSSGHDAP MIAYDAILAA GDSWEELAHR 301 350 ENSP00000420200/1-357 AFFHGGDSDS TAAIAGCWWG VMYGFKGVSP SNYEKLEYRN RLEETARALY ENSBTAP00000049744/1-353 AFFHGGDSDS TAAIAGCWWG VMYGFKGVSP SNYEKLEYRN RLEETARALY ENSTTRP00000013664/1-339 AFFHGGDSDS TAAI-GLW-- -----RVGSD ESHRVLETNL R---IAR-LY bmy_11744T0/1-299 AFFHGGDSDS TAAIAGCWWG VMYGFKGVSP SNYEKLEYRN RLEEIARALY BACU009301/1-362 AFFHGGDSDS TAAIAGCWWG VMYGFQGVSP SNYEKLEYRK RLEEIARALY 351 400 ENSP00000420200/1-357 SLGSKEDTVI SL ENSBTAP00000049744/1-353 SLR------- -- ENSTTRP00000013664/1-339 S----ED--V SP bmy_11744T0/1-299 SLRSKEDTVI TL BACU009301/1-362 SLRSKEDTVI TL