KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:59:59 2014 Check: 00 .. Name: ENSTTRP00000004796/1-520 Len: 551 Check: 3913 Weight: 1.00 Name: ENSP00000379862/1-550 Len: 551 Check: 534 Weight: 1.00 Name: ENSBTAP00000049747/1-550 Len: 551 Check: 683 Weight: 1.00 Name: bmy_17801T0/1-551 Len: 551 Check: 4664 Weight: 1.00 Name: BACU008694/1-522 Len: 551 Check: 8280 Weight: 1.00 // 1 50 ENSTTRP00000004796/1-520 ---------- ---------- ---------P IAITCFTEGL DIRKEKADVL ENSP00000379862/1-550 MSAAWIPALG LGVC-LLLLP GPAGSEGAAP IAITCFTRGL DIRKEKADVL ENSBTAP00000049747/1-550 MWASWIPVLC LGVC-LLLPP EPVGSEGAVP IPITCSTRGL DIRKEKADVL bmy_17801T0/1-551 MSAAWIPVLC LGVCLLLLLP EPAGSEGAVP IAITCFTRGL DIRKEKADVL BACU008694/1-522 ---------- ---------- ---------P IAITCFTRGL DIRKEKADVL 51 100 ENSTTRP00000004796/1-520 CPGGCPLEEF SVFGNIVYAS VSSICGAAIH RGVISNSGGP VRIYSLPGRE ENSP00000379862/1-550 CPGGCPLEEF SVYGNIVYAS VSSICGAAVH RGVISNSGGP VRVYSLPGRE ENSBTAP00000049747/1-550 CPGGCPLEEF SVFGHIVYAS VSSICGAAVH RGVIGHSGGP VRIYSLPGRE bmy_17801T0/1-551 CPGGCPLEEF SVFGNIVYAS VSSICGAAVH RGVISNSGGP VRIYSLPGRE BACU008694/1-522 CPGGCPLEEF SVFGNIVYAS VSSICGAAIH RGVISNSGGP VRIYSLPGRE 101 150 ENSTTRP00000004796/1-520 NYSSVVANGI QSQTLSRWSA SFTVTKGKSG TQEATGQAVS TARPAIGKRL ENSP00000379862/1-550 NYSSVDANGI QSQMLSRWSA SFTVTKGKSS TQEATGQAVS TAHPPTGKRL ENSBTAP00000049747/1-550 NYSSVVANGI QSQMLSRWSA SFTVTKGKSG TQEATGQAVS TAHPATGKRL bmy_17801T0/1-551 NYSSVVANGI QSQTLSRWSA SFTVTKGKSG AQEATGQAVS TARPAIGKRL BACU008694/1-522 NYSSVVANGI QSQTLSRWSA SFTVTKGKSG TQEATGQAVS TARPAIGKRL 151 200 ENSTTRP00000004796/1-520 KKTPEKKTGN KDCKADIAFL IDGSFNIGQR RFNLQKNFVG KVALMLGIGT ENSP00000379862/1-550 KKTPEKKTGN KDCKADIAFL IDGSFNIGQR RFNLQKNFVG KVALMLGIGT ENSBTAP00000049747/1-550 KKTPEKKTGN KDCKADIAFL IDGSFNIGQR RFNLQKNFVG KVALMLGIGT bmy_17801T0/1-551 KKTPEKKTGN KDCKADIAFL IDGSFNIGQR RFNLQKNFVG KVALMLGIGT BACU008694/1-522 KKTPEKKTGN KDCKADIAFL IDGSFNIGQR RFNLQKNFVG KVALMLGIGT 201 250 ENSTTRP00000004796/1-520 EGPHVGLVQA SEHPKIEFYL KNFTSAKDVL FAIKEVGFRG GNTNT-KALK ENSP00000379862/1-550 EGPHVGLVQA SEHPKIEFYL KNFTSAKDVL FAIKEVGFRG GNSNTGKALK ENSBTAP00000049747/1-550 EGPHVGLVQA SEHPKIEFYL KNFTSAKDVL FAIKEVAFRG GNSNTGKALK bmy_17801T0/1-551 EGPHVGLVQA SEHPQIEFYL KNFTSAKDVL FAIKEVGFRG GNSNTGKALK BACU008694/1-522 EGPHVGLVQA SEHPQIEFYL KNFTSAKDVL FAIKEVGFRG GNSNTGKALK 251 300 ENSTTRP00000004796/1-520 HTAQKFFTAD TGAR-GIPKV VVVFIXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000379862/1-550 HTAQKFFTVD AGVRKGIPKV VVVFIDGWPS DDIEEAGIVA REFGVNVFIV ENSBTAP00000049747/1-550 HTAQKFFTAD TGARKGIPKV VVVFIDGWPS DDIEEAGIVA REFGVNVFIV bmy_17801T0/1-551 HTAQKFFTED TGVRKGIPKV VVVFIDGWPS DDIEEAGIVA REFGVNVFIV BACU008694/1-522 HTAQKFFTED TGVRKGIPKV VVVFIDGWPS DDIEEAGIVA REFGVNVFIV 301 350 ENSTTRP00000004796/1-520 XXXXXXXXXX XXXXXVAFVD KAVCRSNGFF SYYMPNWFGT TKYVKPLVQK ENSP00000379862/1-550 SVAKPIPEEL GMVQDVTFVD KAVCRNNGFF SYHMPNWFGT TKYVKPLVQK ENSBTAP00000049747/1-550 SVAKPIPEEL GMVQDVAFVD KAVCRNNGFF SYHMPNWFGT TKYVKPLVQK bmy_17801T0/1-551 SVAKPIPEEL GMVQDVAFVD KAVCRNNGFF SYHMPNWFGT TKYVKPLVQK BACU008694/1-522 SVAKPIPEEL GMVQDVAFVD KAVCRNNGFF SYHMPNWFGT TKYVKPLVQK 351 400 ENSTTRP00000004796/1-520 LCTHEQMVCS KTCYNSVNIA FLIDGSSSVG ESNFRLILEF ISNIAKIFEI ENSP00000379862/1-550 LCTHEQMMCS KTCYNSVNIA FLIDGSSSVG DSNFRLMLEF VSNIAKTFEI ENSBTAP00000049747/1-550 LCTHEQMMCS KTCYNSVNIA FLIDGSSSVG ESNFRLMLEF VSNIAKTFEI bmy_17801T0/1-551 LCTHEQMMCS KTCYNSVNIA FLVDGSSSIG ESNFRLMLEF VSNIAKTFEI BACU008694/1-522 LCTHEQMMCS KTCYNSVNIA FLVDGSSSIG ESNFRLMLEF VSNIAKTFEI 401 450 ENSTTRP00000004796/1-520 SDIGAKIAAV QFTYDQRTEF SFTDYSTKEN VLAVIRNIRY MSGGTATGDA ENSP00000379862/1-550 SDIGAKIAAV QFTYDQRTEF SFTDYSTKEN VLAVIRNIRY MSGGTATGDA ENSBTAP00000049747/1-550 SDIGAKIAAV QFTYDQRTEF SFTDYSTKEN VLAVIRNISY MSGGTATGDA bmy_17801T0/1-551 SDIGAKIAAV QFTYDQRTEF SFTDYSTKEN VLAVIRNIRY MSGGTATGDA BACU008694/1-522 SDIGAKIAAV QFTYDQRTEF SFTDYSTKEN VLAVIRNIRY MSGGTATGDA 451 500 ENSTTRP00000004796/1-520 ISFTVRNVFG PMRDSPNKNF LVIVTDGQSY DDVRGPAAAA HDAGITIFSV ENSP00000379862/1-550 ISFTVRNVFG PIRESPNKNF LVIVTDGQSY DDVQGPAAAA HDAGITIFSV ENSBTAP00000049747/1-550 ISFTVRNVFG PVRDSPNKNF LVIVTDGQSY DDVRGPAAAA HDAGITIFSV bmy_17801T0/1-551 ISFTVRNVFG PMRDSPNKNF LVVXTDGQSY DDVRGPAAAA HDAGITIFSV BACU008694/1-522 ISFTVRNVFG PMRDSPNKNF LVVVTDGQSY DDVRGPAAAA HDAGITIFSV 501 550 ENSTTRP00000004796/1-520 GVAWAPLDDL KDMASKPKES HVFFTREFTG LEPIVSDVIR GICRDFLESQ ENSP00000379862/1-550 GVAWAPLDDL KDMASKPKES HAFFTREFTG LEPIVSDVIR GICRDFLESQ ENSBTAP00000049747/1-550 GVAWAPLDDL KDMASKPKES HAFFTREFTG LEPIVSDVIR GICRDFLESQ bmy_17801T0/1-551 GVAWAPLDDL KDMASKPKES HAFFTREFTG LEPIVSDVIR GICRDFLESQ BACU008694/1-522 GVAWAPLDDL KDMASKPKES HAFFTREFTG LEPIVSDVIR GICRDFLESQ 551 600 ENSTTRP00000004796/1-520 Q ENSP00000379862/1-550 Q ENSBTAP00000049747/1-550 Q bmy_17801T0/1-551 Q BACU008694/1-522 Q