KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:00 2014 Check: 00 .. Name: ENSP00000371929/1-454 Len: 545 Check: 2767 Weight: 1.00 Name: ENSTTRP00000003029/1-275 Len: 545 Check: 6071 Weight: 1.00 Name: ENSBTAP00000049787/1-414 Len: 545 Check: 2232 Weight: 1.00 Name: bmy_10432T0/1-498 Len: 545 Check: 1564 Weight: 1.00 // 1 50 ENSP00000371929/1-454 MQKHS----- ---------- ---------- ---------- ---------- ENSTTRP00000003029/1-275 VQKHF----- ---------- ---------- ---------- ---------- ENSBTAP00000049787/1-414 ---------- ---------- ---------- ---------- ---------- bmy_10432T0/1-498 MERGWLHGEG FLLCLILHLL LQANEKKDAK GKEVEEKICC ERGKLFQYNF 51 100 ENSP00000371929/1-454 ------PGPP ALALLSQSLL TTGNGDTLII NCPGFGQHRV DPAAFQAVFD ENSTTRP00000003029/1-275 --------PP VLALLSQSLL STGRGDNFTI TCSGFDQHGV DPAAFQAVFD ENSBTAP00000049787/1-414 ---------- ---------- ---------- ---------- ---------- bmy_10432T0/1-498 PSLENTAQTP VPALLSQSLL STGRGDNFTI TCSGFDQHGV DPAAFQAVFD 101 150 ENSP00000371929/1-454 RKAIGPVTNY SVATHVNISF TLSAIWNCYS RIHTFNCH-- HARPWHNQFV ENSTTRP00000003029/1-275 RKAFRPGTNF SIPTHVHISF TLSAIWNCFS RIHIFN---- -----YNPFL ENSBTAP00000049787/1-414 RKAFRPATNV SIPIRVNISF TLSAILEVDA QLQLMTSFLW LNMIWYNPFI bmy_10432T0/1-498 RKAFRPVTNF SIPTHVHISF TLSANLEVDT HLQLMTSFLW LNVMWYNPFL 151 200 ENSP00000371929/1-454 QWNPDECGGI KKSGMATENL WLSDVFIEES V--DQTPAGL MASMSIVKAT ENSTTRP00000003029/1-275 RWNPVECGGI RKLSVATENL WLADIFIEEF M--DQTPPGL MAMSTVMI-T ENSBTAP00000049787/1-414 TWNPEECGGI RKLGMATENL WLPDIFIEEL MDTDQTPPGL MAY---IN-S bmy_10432T0/1-498 RWNPVECGGI RKLSVAAENL ---------- MDMDQTPSGL MAY---VN-S 201 250 ENSP00000371929/1-454 SNTIS----- QCGWSASANW TPSISPSMDR ARAWRRMSRS FQ-------- ENSTTRP00000003029/1-275 SNTVNQRRPA SATWT----- STSPL--MNR SWAWRRTCRR FK-------- ENSBTAP00000049787/1-414 NGHIKYSKPM RVTSICNLDI FYFPFDEQNC TLTFSSFVYT VEKMVLGMEQ bmy_10432T0/1-498 DDHIEYSKPM QVTSICNLDI STSLL--MNR TAPSPPALSS TQNMVLGMEQ 251 300 ENSP00000371929/1-454 -------IHH RTSFRTRREW VLLGIQKRTI KVTVATNQYE QAIFHVAIRR ENSTTRP00000003029/1-275 --------HH RTSF-GARER VLQAIHQRMM KMPVGTNEYD QII-YVAIRR ENSBTAP00000049787/1-414 DVQEILETSQ NIIW-NKGEW VLQGIHQ-MM KMTAGTNGYD QIVFYVAIRR bmy_10432T0/1-498 DVQEILKTSQ NVVW-SKGEW VLQGIRQRMM KMTVGTNEYD QIIFYA--QA 301 350 ENSP00000371929/1-454 RCRPSP-YVV NFLVPSGILI AIDALSFYLP LESGNCAPFK MTVLLGYSVF ENSTTRP00000003029/1-275 --RPSL-YVI SLLVPRSFLI AIDALSFYLP AESENRAPFK MTLLLGYNVF ENSBTAP00000049787/1-414 --RPTL-YVI NLLVPSSFLV AIDALSFYLP AESENRASFK MTLLLGYNIF bmy_10432T0/1-498 --QPLVPRVI SLLVPSSFLI AIDALSFYLP AESESYAPFK MTLLMGYNVF 351 400 ENSP00000371929/1-454 LLMM-NDLLP ATSTSSHASL VAPLALMQTP LPAGVYFALC LSLMVGSLLE ENSTTRP00000003029/1-275 LLMTLNDLLP ASGT------ ---------- ---------- ---------- ENSBTAP00000049787/1-414 LLMM-NDLLP SSSTS----- ----LIS--- ----VYFALC LSLMVLSLLE bmy_10432T0/1-498 LLMMLNDLLP ASGNP----- ----LISRPN FPPGVYFALC LSLMVLRLLE 401 450 ENSP00000371929/1-454 TIFITHLLHV ATTQPLPLPR WLHSLLLHCT GQGRCCPTAP QKGNKGPGLT ENSTTRP00000003029/1-275 ---------- ----PPPS-- ---------- ---------- ---------- ENSBTAP00000049787/1-414 TIFITYLLHL ATTQPPPMPR WLHSLLLHCT SPRTCCPAVP WKGNMDL--- bmy_10432T0/1-498 TIFITDLLHL ATTQPPPRPR WLRSLLLHCT SPRKHCPAVP QKGNTGLGRS 451 500 ENSP00000371929/1-454 PTHLP----- ---------G VKEPEVSAGQ MPGPGEAELT GGSEWTRAQR ENSTTRP00000003029/1-275 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049787/1-414 -AHLPGEGCQ HSDLGGPQVG VKEPMELVGK VPHPRETELN GCPGSARNQQ bmy_10432T0/1-498 PAHLP----- ----GARGVG --------GK VPGPREAELN GCPGSARAQQ 501 550 ENSP00000371929/1-454 EHEAQKQHSV ELWVQFSHAM DALLFRLYLL FMASSIITVI CLWNT ENSTTRP00000003029/1-275 ---------- ---------- ---------- ---------- ----- ENSBTAP00000049787/1-414 EDKAQKLHLV HLWVRLSHMM DTLLFRLYLL FMATSVVTVI ILWN- bmy_10432T0/1-498 EDEAQKQHSV SLWLQFSHMM DSLLFHLYLL FLVTSIVTVI ILWNT