KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:00 2014 Check: 00 .. Name: ENSP00000339723/1-450 Len: 461 Check: 110 Weight: 1.00 Name: ENSBTAP00000049799/1-406 Len: 461 Check: 8302 Weight: 1.00 Name: ENSTTRP00000016117/1-443 Len: 461 Check: 8475 Weight: 1.00 Name: bmy_07635T0/1-306 Len: 461 Check: 7015 Weight: 1.00 Name: BACU010136/1-389 Len: 461 Check: 1630 Weight: 1.00 // 1 50 ENSP00000339723/1-450 MGKSFANFMC KKDFHPASKS NIKKVWMAEQ KISYDKKKQE ELMQQYLKEQ ENSBTAP00000049799/1-406 MGKSFANFMC KKDFHPASKS NIKKVWMAEQ KISYDKKKQE ELMQQYLKEQ ENSTTRP00000016117/1-443 MGKSFANFMC KKDFHPASKS NIKKVWMAEQ KISYDKKKQE ELMQQYLKEQ bmy_07635T0/1-306 ---------- ---------- ---------M KLEYTKEGGK NL-------- BACU010136/1-389 MGKSFANFMC KKDFHPASKS NIKKVWMAEQ KISYDKKKQE ELMQQYLKEQ 51 100 ENSP00000339723/1-450 ESYDNRLLMG DERVKNGLNF MYEAPPGAKK ---ENKEKEE TEGETEYKFE ENSBTAP00000049799/1-406 ESYDNRLLMG DERVKNGLNF MYEAPPGAKK GNQENKEKEE TEGETEYKFE ENSTTRP00000016117/1-443 ESYDNXXXXX XXXXXXXXXX XXXXXXXXXX ---XNKEKEE TEGETEYKFE bmy_07635T0/1-306 -SY------- ---------L IFSCIPT--- ---------- ---------- BACU010136/1-389 ESYDNRLLMG DERVKNGLNF MYEAPPG--- ---------- ---------- 101 150 ENSP00000339723/1-450 WQKGAPREKY AKDDMNIRDQ PFGIQVRNVR CIKCHKWGHV NTDRECPLFG ENSBTAP00000049799/1-406 WQKGAPREKY AKDDMNIRDQ PFGIQVRNVR CIKCHKWGHV NTDRECPLFG ENSTTRP00000016117/1-443 WQKGAPREKY AKDDMNIRDQ PFGI-VRNVR CIKCHKWGHV NTDRECPLFG bmy_07635T0/1-306 ---------- ---------- ---------- ---------V ESEK------ BACU010136/1-389 ---------- ---------- ---------- ---------A KKDRECPLFG 151 200 ENSP00000339723/1-450 LSGINASSVP TDGSGPSMHP SELIAEMRNS GFALKRNVLG RNLTANDPSQ ENSBTAP00000049799/1-406 LSGINASSVP TDGSGPSMHP SELIAEMRNS GFALKRNVLG RNLTANDPSQ ENSTTRP00000016117/1-443 LSGINASSVP TDGSGPSMHP SELIAEMRNS GFALKRNVLG RNLTANDPSQ bmy_07635T0/1-306 ---------- ----GPSMHP SELIAEMRNS GFALKRNVLG RNLTANDPSQ BACU010136/1-389 LSGINASSVP TDGSGPSMHP SELIAEMRNS GFALKRNVLG RNLTANDPSQ 201 250 ENSP00000339723/1-450 EYVASEGEED PEVEFLKSLT TKQKQKLLRK LDRLEKKKKK --KDRKKKKF ENSBTAP00000049799/1-406 EYVASEGEED PEVEFLKSLT TKQKQKLLRK LDRLEKKKKK KKKDRKKKKL ENSTTRP00000016117/1-443 EYVASEGEED PEVEFLKSLT TKQKQKLLRK LDRLEKKKKK KRKDRKKKKL bmy_07635T0/1-306 EYVASEGEED PEVEFLKSLT TKQKQKLLRK LDRLEKKKKK RRKDRKKKKL BACU010136/1-389 EYVASEGEED PEVEFLKSLT TKQKQKLLRK LDRLEKKKKK RRKDRKKKKL 251 300 ENSP00000339723/1-450 QKSRSKHKKH KSSSSSSSSS SSSSSTETSE SSSESESNNK EKKIQRKKRK ENSBTAP00000049799/1-406 QKSRSKHKKH KNKPSSPSPX S--------- ---------- ---------- ENSTTRP00000016117/1-443 QKSRSKHKKH KNKSSSSSSS SSGGTSESS- ----SESDNK EKKIQKKKRK bmy_07635T0/1-306 QKSRSKHKKH KNKSSSSSSS SSGDTSESS- ----SESDNK EKKIQKKKRK BACU010136/1-389 QKSRSKHKKH KNKSSSSSSS SSGDTSESS- ----SESDNK EKKIQKKKRK 301 350 ENSP00000339723/1-450 KNKCSGHNNS DSEEKDKSKK RKLHEELSSS HHNREKAKEK PRFLKHESSR ENSBTAP00000049799/1-406 -----GHNNS DSEERGKSKK RKRDEEHSCS HSN----KEK PKFLKQESSR ENSTTRP00000016117/1-443 KNKRSGNYNS GSEETDKSKK RKLDEERSSS HSN----KEK PRFLKQESSG bmy_07635T0/1-306 KNRRSGNYNS GSEETDKSKK RKLDEELSSS HSN----KEK PRFLKQESSG BACU010136/1-389 KNKRSGNYNS GSEETDKSKK RKLDEERSSS HSN----KEK PRFLKQESSG 351 400 ENSP00000339723/1-450 EDSKWSHSDS DKKSRTHKHS PEKRGSERKE GSSRSHGREE RSRRSRSRSP ENSBTAP00000049799/1-406 ENSKRSHSDS DRKPRSHDQS PGKRGSGRK- RSSRSQSRDE RSRRSRSRSH ENSTTRP00000016117/1-443 EKSKWRHSDS DRKPRSHNQS PEERGSGRNE RGSRSQSRDE RSRRSRSRSH bmy_07635T0/1-306 EKSKWSHSDS DRKPRNHNQS PEESGSGRN- ---------E RSRRSRSRSH BACU010136/1-389 EKSKWSHSDS DRKPRNHNQS PEESGSGRNE RSSRSQSRDE RSRRSRSRSH 401 450 ENSP00000339723/1-450 GSYKQRETRK RAQRNPGEEQ SRRNDSRSHG TDLYRGEKMY REHPG-GTHT ENSBTAP00000049799/1-406 GSYKPREIRK RPRRSPSEDR DRRNDTRCHG ADTYRGGQVH REHYR----- ENSTTRP00000016117/1-443 GGYKPGEIRR RPRPSPSEEW DRRNDTRSHG TDRHRGGKMH RALSG-DRRT bmy_07635T0/1-306 GGYKPREMRK RPRRSPSEER DRRNNTRSHG TDRYRGGKMH GALSGDDRHT BACU010136/1-389 GGYKPREVRK RPRRSPSEER DRRNDTRSHG TDRYRGGKMH GALSG-DRHT 451 500 ENSP00000339723/1-450 KVTQRE---- - ENSBTAP00000049799/1-406 ---------- - ENSTTRP00000016117/1-443 RVMQTKR--- - bmy_07635T0/1-306 RVMQREWRSR E BACU010136/1-389 RVMQREWRSR E