KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:01 2014 Check: 00 .. Name: ENSTTRP00000004703/1-417 Len: 489 Check: 3413 Weight: 1.00 Name: ENSP00000204549/1-485 Len: 489 Check: 7599 Weight: 1.00 Name: bmy_12707T0/1-488 Len: 489 Check: 46 Weight: 1.00 Name: ENSBTAP00000049812/1-487 Len: 489 Check: 8252 Weight: 1.00 // 1 50 ENSTTRP00000004703/1-417 MALPPFFTPG RPGPPLPQPP APAPFGCPPP PLPSPAFPPP LPQRPGPFPG ENSP00000204549/1-485 MALPPFFGQG RPGPPPPQPP PPAPFGCPPP PLPSPAFPPP LPQRPGPFPG bmy_12707T0/1-488 MALPPFFTPG RPGPPPPQPP APAPFGCPPP PLPSPAFPPP LPQRPGPFPG ENSBTAP00000049812/1-487 MALPPFFTPG RPGPPPPQPP PPAPFGCPPP PLPSPAFPPP LPQRPGSFPG 51 100 ENSTTRP00000004703/1-417 ---------- ---------- ---------- ---------P PLSPPPLA-- ENSP00000204549/1-485 ASAPFLQPPL ALQPRASAEA SR----GGGG AGAFYPVPPP PLPPPPPQCR bmy_12707T0/1-488 ASAPFLQPPL ALQPRAPGEA SRGGGGGGGG GGSFYQVPPP PLPPPPPQCR ENSBTAP00000049812/1-487 ASAPFLQPPL ALQPRAPGEV SR-GGGGGGG GGSFYPVPPP PLPPPPPQCR 101 150 ENSTTRP00000004703/1-417 ---------- QSPGPPG--- -----WPEA- PPPSDVLGD- ALQR-RD-QW ENSP00000204549/1-485 PFPGTDAGER PRPPPPGPGP PWSPRWPEAP PPPADVLGDA ALQRLRDRQW bmy_12707T0/1-488 PFLGNDAGER PRPPPPGPGP PWSPRWPEA- PPPSDVLGDA ALQRLRDRQW ENSBTAP00000049812/1-487 PFLGNDAGER PRPPPPGPGP PWSPRWPEA- PPPSDALGDA ALQRLRDRQW 151 200 ENSTTRP00000004703/1-417 LEAVFGTPRR A-CPVTPRAP AGPNLGEVRA RLRGSLRLVR RLRD-GHALR ENSP00000204549/1-485 LEAVFGTPRR AGCPVPQRTH AGPSLGEVRA RLLRALRLVR RLRGLSQALR bmy_12707T0/1-488 LEAVFGTPRR AGCPVSPRAP AGPSLGEVRA RLRGSLRLVR RLRDLGHALR ENSBTAP00000049812/1-487 LEAVFGTPRR AGGSVPSRAP AGPSLGEVRA RLRGALRLLR RLRDLGQALR 201 250 ENSTTRP00000004703/1-417 EAEADGVAWA QLHAEAQPLR AELAERLQLL TQAAYVGEAR RRLERVRRRR ENSP00000204549/1-485 EAEADGAAWV LLYSQTAPLR AELAERLQPL TQAAYVGEAR RRLERVRRRR bmy_12707T0/1-488 EAEADGVAWA QLHAEAQPLR AELAERLQLL TQAAYVGEAR RRLERVRRRR ENSBTAP00000049812/1-487 EAEADGAAWA QLHAQAQPLR AELAERLELL TQAAYVGEAR RRLERVRRRR 251 300 ENSTTRP00000004703/1-417 LRLRERARER EAELEAEATR AAEREQEIDR WRVKCVQEVE EKKREQELKA ENSP00000204549/1-485 LRLRERARER EAEREAEAAR AVEREQEIDR WRVKCVQEVE EKKREQELKA bmy_12707T0/1-488 LRLRERAWER EAEREAEATR AAEREQEIDR WRVKCVQEVE EKKREQELKA ENSBTAP00000049812/1-487 LRLRERVRER EAEREAEAAR AAEREQEIDR WRVQCVQEVE EKKREQELKA 301 350 ENSTTRP00000004703/1-417 -------XXV RKQADTKRMV DILRALEKLR KLRKEAAAMK XXXXXXXXXX ENSP00000204549/1-485 AADGVLSEVR KKQADTKRMV DILRALEKLR KLRKEAAARK GVCPPASADE bmy_12707T0/1-488 AADGVLSEVR KKQADTKRMV DVLRALEKLR KLRKEAAARK GVCPPASADE ENSBTAP00000049812/1-487 AADGVLSEVR KKQADTKRMV DILRALEKLR KLRKEAAARK GVCPPASADE 351 400 ENSTTRP00000004703/1-417 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000204549/1-485 TFTHHLQRLR KLIKKRSELY EAEERALRVM LEGEQEEERK RELEKKQRKE bmy_12707T0/1-488 TFEHHLQRLR KLIKKRSELY EAEERALRVM LEGEQEEERK RELEKKQRKE ENSBTAP00000049812/1-487 TFEHHLQRLR KLIKKRSELY EAEERALQVM LEGEQEEERK RELEKKQRKE 401 450 ENSTTRP00000004703/1-417 XXXXXXXXXX XXXXXXXXXX EFPLAHLLQP FRQYYLQAEH SLPALIQIRH ENSP00000204549/1-485 KEKILLQKRE IESKLFGDPD EFPLAHLLEP FRQYYLQAEH SLPALIQIRH bmy_12707T0/1-488 KEKFLLQKRE IESKLFGDPD EFPLAHLLQP FRQYYLQAEH SLPALIQIRH ENSBTAP00000049812/1-487 KEKFLLQKHE IESKLFGDPD EFPLAHLLQP FRQYYLQAEH SLPALIQIRH 451 500 ENSTTRP00000004703/1-417 DWDQYLVPSD HPKGNSVPQG WVLPPLPSND IWATAIKLH ENSP00000204549/1-485 DWDQYLVPSD HPKGNFVPQG WVLPPLPSND IWATAVKLH bmy_12707T0/1-488 DWDQYLVPSD HPKGNSVPQG WVLPPLPSND IWATAIKLH ENSBTAP00000049812/1-487 DWDQYLVPSD HPKGSSIPQG WVLPPLPSND IWATAVKLH