KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:03 2014 Check: 00 .. Name: ENSP00000389128/1-587 Len: 978 Check: 4436 Weight: 1.00 Name: ENSBTAP00000049967/1-584 Len: 978 Check: 2508 Weight: 1.00 Name: ENSTTRP00000003427/1-570 Len: 978 Check: 3035 Weight: 1.00 Name: bmy_10128T0/1-569 Len: 978 Check: 4167 Weight: 1.00 Name: BACU016496/1-969 Len: 978 Check: 4369 Weight: 1.00 // 1 50 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 MLRSALLCAA LGVLRAQPFP CPPTCRCIFR DAAQCSQGSV ARIAALGLPT 51 100 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 NLTHILLFQM GRGALQNSSF SGMTVLQRLM LSDSQVSAIA PGTFNDLIKL 101 150 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 KTLRLSHNKI THLPGALLDK LVLLEQLFLD GNELKSLDQN MFQKLVNLQE 151 200 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 LFLNQNQLAF LPASLFTHLG NLKLLDLSVN NLTHLPEGLF GVQVKLEKLL 201 250 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 LHSNQLVSLD SGLLDSLRAL MELQLDRNHI RSVAPGAFDR LRSLSSLTLS 251 300 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 RNRLEFLPSA LFLHSHNLTF LTLFENPLEE LPEVLFGEMG GLRELWLNAT 301 350 ENSP00000389128/1-587 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ---------- bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU016496/1-969 QLRTLPAAAF RNLSGLRVVT EFTHGDREAW RGDELTKDAA RDRLTPFLDN 351 400 ENSP00000389128/1-587 ---------- ---------- ---------- --------MP LDKAMPLKHY ENSBTAP00000049967/1-584 ---------- ---------- ---------- ---------- ----MLPKHY ENSTTRP00000003427/1-570 ---------- ---------- ---------- ---------- ----MPLKHY bmy_10128T0/1-569 ---------- ---------- ---------- ---------- ----MPLRHY BACU016496/1-969 VLIYGSLDLH QHPDPFLSSD PDFRLRRTVY IVVPWGSNAA CPEAMPLRHY 401 450 ENSP00000389128/1-587 LLLLVGCQAW GAGLAYHGCP SECTCSRASQ VECTGARIVA VPTPLPWNAM ENSBTAP00000049967/1-584 LLLLVGCQAW AAGLAFYGCP SECTCSRASQ VECTGARIAV VPTPLPWNAM ENSTTRP00000003427/1-570 LLLLVGCHAW AVGWANHGCP RECTCSRASQ VECTGAHIVV VPTPLPWNAM bmy_10128T0/1-569 LLLLVGCQAW AVGWAYHGCP RECTCSRASQ VECTGARIMV VPTPLPWNAM BACU016496/1-969 LLLLVGCQAW AVGWAYHGCP RECTCSRASQ VECTGARIMV VPTPLPWNAM 451 500 ENSP00000389128/1-587 SLQILNTHIT ELNESPFLNI SALIALRIEK NELSRITPGA FRNLGSLRYL ENSBTAP00000049967/1-584 SLQILNTHIT ELNESPFLNI SALIALRIEK NELAHIAPGA FRSLGSLRYL ENSTTRP00000003427/1-570 SLQILNTHIT ELNESPFLNV SALIALRIEK NELSHIAPSA FHNLGSLRYL bmy_10128T0/1-569 SLQILNTHIT ELNESPFLNI SALIALRIEK NELSHIAPSA FRNLGSLRYL BACU016496/1-969 SLQILNTHIT ELNESPFLNI SALIALRIEK NELSHIAPSA FRNLGSLRYL 501 550 ENSP00000389128/1-587 SLANNKLQVL PIGLFQGLDS LESLLLSSNQ LLQIQPAHFS QCSNLKELQL ENSBTAP00000049967/1-584 SLANNKLQIL PVGLFQGLDN LESLLLSSNQ LVQIQPAHFT HFSNLKELQL ENSTTRP00000003427/1-570 SLANNKLQVL PVSVFQGLDN LESLLLSSNQ LVQIQPTHFA HFSNLKELQL bmy_10128T0/1-569 SLANNKLQVL PVSLFQGLDN LESLLLSSNQ LVQIQPTHFT HFSNLKELQL BACU016496/1-969 SLANNKLQVL PVSLFQGLDN LESLLLSSNQ LVQIQPTHFT HFSNLKELQL 551 600 ENSP00000389128/1-587 HGNHLEYIPD GAFDHLVGLT KLNLGKNSLT HISPRVFQHL GNLQVLRLYE ENSBTAP00000049967/1-584 HGNHLEYIPD GVFDHLVGLT KLNLGKNSLT HLSPRVFQRL SNLQVLRLYE ENSTTRP00000003427/1-570 HGNHLEFIPD GVFDHLVGLV KLNLGKNSLT HLSPRVFQHL SNLQVLRLYE bmy_10128T0/1-569 HGNHLEFIPD GVFDHLVGLV KLNLGKNSLT HLSPRVFQHL GNLQVLRLYE BACU016496/1-969 HGNHLEFIPD GVFDHLVGLI KLNLGKNSLT HLSPRVFQHL NNLQVLRLYE 601 650 ENSP00000389128/1-587 NRLTDIPMGT FDGLVNLQEL ALQQNQIGLL SPGLFHNNHN LQRLYLSNNH ENSBTAP00000049967/1-584 NRLSDIPMGC FDGLSNLQEL ALQQNQIGML SPGLFHNNRN LQKLYLSNNH ENSTTRP00000003427/1-570 NRISDIPMGC FDGLGNLQEL ALQQNQISTL SPGLFHNNRN LQKLYLSNNH bmy_10128T0/1-569 NRISDLPMGC FDGLGNLQEL ALQQNQISML SPGLFHNNRN LQKLYLSNNH BACU016496/1-969 NRISDLPMGC FDGLGNLQEL ALQQNQISML SPGLFHNNRN LQKLYLSNNH 651 700 ENSP00000389128/1-587 ISQLPPSVFM QLPQLNRLTL FGNSLKELSP GIFGPMPNLR ELWLYDNHIS ENSBTAP00000049967/1-584 ISQLPPGIFL HLPQLNRLTL FGNSLKELSP GIFGPMHNLR ELWLYDNHIT ENSTTRP00000003427/1-570 ISQLPSGIFM QLPQLNQLTL FGNSLKELSP GIFGPMHNLR ELWLYDNHIA bmy_10128T0/1-569 ISQLPSGIFM QLPQLHRLTL FGNSLKELSP GIFGPMHNLR ELWLYDNHIT BACU016496/1-969 ISQLPSGIFM QLPQLNRLTL FGNSLKELSP GIFGPMHNLR ELWLYDNHIT 701 750 ENSP00000389128/1-587 SLPDNVFSNL RQLQVLILSR NQISFISPGA FNGLTELREL SLHTNALQDL ENSBTAP00000049967/1-584 SLPDNVFSSL SQLQVLILSR NQISYISPDA FNGLVELREL SLHTNALQEL ENSTTRP00000003427/1-570 SLPDNVFSSL RQLQALVLSH NQISYISPDA FNGLVEMREL SLHTNVLQEL bmy_10128T0/1-569 SLPDNVFSSL RQLQVLVLSH NQISYISPDA FNGLVEMREL SLHTNVLQEL BACU016496/1-969 SLPDNVFSSL RQLQVLGLSH NQISYISPDA FNGLVEMREL SLHTNVLQEL 751 800 ENSP00000389128/1-587 DGNVFRMLAN LQNISLQNNR LRQLPGNIFA NVNGLMAIQL QNNQLENLPL ENSBTAP00000049967/1-584 DGSIFRMLVN LQNISLQNNR LRQLPGNLFA NVNNLLTIQL QNNQLENLPL ENSTTRP00000003427/1-570 DGSVFRTLAN LQNISLQNNR LRQLPSNIFA NANELRTIQL QNNQLENLPL bmy_10128T0/1-569 DGSVFRMLAN LQNISLQNNR LRQLPGNIFA NANALMTIQL QNNQLENLPL BACU016496/1-969 DGSVFRMLAN LQNISLQNNR LRQLPGNIFA NANALMTIQL QNNQLENLPL 801 850 ENSP00000389128/1-587 GIFDHLGKLC ELRLYDNPWR CDSDILPLRN WLLLNQPRLG TDTVPVCFSP ENSBTAP00000049967/1-584 GIFDHLGKLC ELRLYDNPWR CDSDILPLHN WLLLNKARLG TDSVPVCFSP ENSTTRP00000003427/1-570 GIFDHLGKLC ELRLYDNPWR CDSDILPLHN WLLLNKARLG TDTPPVCFSP bmy_10128T0/1-569 GVFDHLGQLC ELRLYDNPWR CDSDILPLHN WLLLNKARLG TDTLPVCFSP BACU016496/1-969 GIFDHLGKLC ELRLYDNPWR CDSDILPLHN WLLLNKARLG TDTLPVCFSP 851 900 ENSP00000389128/1-587 ANVRGQSLII INVNVAVPSV HV---PEVPS YPETPWYPDT PSYPDTTSVS ENSBTAP00000049967/1-584 ASVRGQSLII ININVVVPSV QGSVVPEVPS YPGTPTYPDT SSYPDTTSIS ENSTTRP00000003427/1-570 ANVRGQSLII IDDNV-VSSV QGSVVPKVST HPETP----- -SYSDTTCVS bmy_10128T0/1-569 ASVRGQSLII IDVNVVVSSV QG---PVVPT HPKTP----- -SYSDTTEFT BACU016496/1-969 ASVRGQSLII IDVNVVVSSV QG---PVVPT QPNTP----- -SYSDTTCIS 901 950 ENSP00000389128/1-587 STTELTSPVE DYTDLTTIQV TDDRSVWGMT QAQSGLAIAA IVIGIVALAC ENSBTAP00000049967/1-584 STTDFTSPSQ DYTDLTTIET PISRGPGDMP QAQRGLAIAA IVIGIIALAC ENSTTRP00000003427/1-570 STT------- DFTSLTTIKT TSSRDTGGMT QAQSGLTIAA IVIGIIALAC bmy_10128T0/1-569 STT------Q DYTSLTTIET TGSRGVRDNT ETQRRLAIAA IVIGIIALAC BACU016496/1-969 STTEFTSTMQ DYTSLTTIGT TDNNKTRSKT TTQSGLAIAA IVIGIIALAC 951 1000 ENSP00000389128/1-587 SLAACVGCCC CKKRSQAVLM QMKAPNEC ENSBTAP00000049967/1-584 SLAACICCCC CKKRSHAVLM QMKAPNEC ENSTTRP00000003427/1-570 SLAACICCCF CKKRNHAVLM QMKAPNEC bmy_10128T0/1-569 SLAACICCCC CKKRSHAVLM QMKAPNEC BACU016496/1-969 SLAACICCCC CKKRSHAVLM QMKAPNEC