KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:04 2014 Check: 00 .. Name: ENSTTRP00000000674/1-472 Len: 507 Check: 5579 Weight: 1.00 Name: ENSP00000360327/1-475 Len: 507 Check: 2220 Weight: 1.00 Name: ENSBTAP00000050033/1-475 Len: 507 Check: 1541 Weight: 1.00 Name: bmy_14871T0/1-507 Len: 507 Check: 2360 Weight: 1.00 Name: BACU000235/1-475 Len: 507 Check: 1873 Weight: 1.00 // 1 50 ENSTTRP00000000674/1-472 ---------- ---------- ---------- --MEGLLTRC RALPALATCS ENSP00000360327/1-475 ---------- ---------- ---------- --MEGLLTRC RALPALATCS ENSBTAP00000050033/1-475 ---------- ---------- ---------- --MEGLLTRC RALPALATCS bmy_14871T0/1-507 GQEAGLGAGT SLAQARWPGA VVPAGLAFAG TTMEGLLTRC RALPALATCS BACU000235/1-475 ---------- ---------- ---------- --MEGLLTRC RALPAWATCS 51 100 ENSTTRP00000000674/1-472 HQLSGYVPHR FHHRAPGRGK RLVLSRMFQP QNLREDQVLS LEGRSGELTC ENSP00000360327/1-475 RQLSGYVPCR FHHCAPRRGR RLLLSRVFQP QNLREDRVLS LQDKSDDLTC ENSBTAP00000050033/1-475 HQLSQYAPQR FHHCAPGRGK RLMLSRMFQP QKLREDQVLS LEGRSGDLTC bmy_14871T0/1-507 HQLSGYVPHR FHHRAPGRGK RLVLSRMFQP QNLREDQVLS LEGRSGELTC BACU000235/1-475 PQLSGYVPHR FHHRAPGRGK RLMLSRMFQP QNLREDQVLS LEGRSGELTC 101 150 ENSTTRP00000000674/1-472 KSQRLMLQVG LIHPASSGCY HLLPYTVRAM EKLVRVIDQE MXXXXXXXXX ENSP00000360327/1-475 KSQRLMLQVG LIYPASPGCY HLLPYTVRAM EKLVRVIDQE MQAIGGQKVN ENSBTAP00000050033/1-475 KSQRLMLQMG LIHPASPGCY HLLPYTVRAM EKLVRVIDQE MQTIGGQKVN bmy_14871T0/1-507 KSQRLMLQVG LIHPASSGCY HLLPYTVRAM EKLMRVIDQE MQAIGGQKVN BACU000235/1-475 KSQRLMLQVG LIHPASSGCY HLLPYTVRAM EKLVRVIDQE MQAIGGQKVN 151 200 ENSTTRP00000000674/1-472 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000360327/1-475 MPSLSPAELW QATNRWDLMG KELLRLRDRH GKEYCLGPTH EEAITALIAS ENSBTAP00000050033/1-475 MPSLSPAELW RATKRWDSMG RELLRLRDRH GKDYCLGPTH EEAITALVAS bmy_14871T0/1-507 MPSLSPAELW RATSRWDSMG KELLKLRDRH GKEYCLGPTH EEAITALIAS BACU000235/1-475 MPSLSPAELW RATSRWDSMG KELLKLRDRH GKEYCLGPTH EEAITALIAS 201 250 ENSTTRP00000000674/1-472 XXXXXXXXXX XXXXXXXXXX XXXXRPRFGL --SREFYMKD MYTFDSS-ET ENSP00000360327/1-475 QKKLSYKQLP FLLYQVTRKF RDEPRPRFGL LRGREFYMKD MYTFDSSPEA ENSBTAP00000050033/1-475 QKTLSYKQLP FLLYQVTRKF RDEPRPRFGL LRGREFYMKD MYTFDSSPEA bmy_14871T0/1-507 QQTLSYKQLP LLLYQVTRKF RDEPRPRFGL LRGREFYMKD MYTFDSSPEA BACU000235/1-475 QQTLSYKQLP LLLYQVTRKF RDEPRPRFGL LRGREFYMKD MYTFDSSPEA 251 300 ENSTTRP00000000674/1-472 AQQTYNVVCD AYSSLFDRLG LQCVKVQADV GSIGGTMSHE FQLPVDVGED ENSP00000360327/1-475 AQQTYSLVCD AYCSLFNKLG LPFVKVQADV GTIGGTVSHE FQLPVDIGED ENSBTAP00000050033/1-475 AQLTYSLVCD AYSSLFNRLG LRCIKVQADV GSIGGMVSHE FQLPVDVGED bmy_14871T0/1-507 ARQTYSLVCD AYSSLFDRLG LRCVKVQADV GSIGGTMSHE FQLPVDVGED BACU000235/1-475 ARQTYSLVCD AYSSLFDRLG LQCVKVQADV GSIGGTMSHE FQLPVDVGED 301 350 ENSTTRP00000000674/1-472 RLAVCSGCGF SANMETLDLS PTNCPACQGP LTKTKGIEVG HTFYLGTKYS ENSP00000360327/1-475 RLAICPRCSF SANMETLDLS QMNCPACQGP LTKTKGIEVG HTFYLGTKYS ENSBTAP00000050033/1-475 RLVVCPSCHF SANMETLDSS RTNCPACQGP LTETKGIEVG HTFYLGTKYS bmy_14871T0/1-507 RLAVCPSCGF SANMETLDLS QTNCPACQGP LTKTKGIEVG HTFYLGTKYS BACU000235/1-475 RLAVCPSCGF SANMETLDLS QTNCPACQGP LTKTKGIEVG HTFYLGTKYS 351 400 ENSTTRP00000000674/1-472 SIFSAQFTNV HGKPSLAEMG CYGLGVTRIL AAVIEALATE DCIRWPGLLA ENSP00000360327/1-475 SIFNAQFTNV CGKPTLAEMG CYGLGVTRIL AAAIEVLSTE DCVRWPSLLA ENSBTAP00000050033/1-475 SIFNAQFINV HGKPSLAEMG CYGLGVTRIL AAAIEVLSTE DCVRWPGLLA bmy_14871T0/1-507 SIFSAQFTNV HGKPSLAEMG CYGLGVTRIL AAVIEALATE DCIRWPSLLA BACU000235/1-475 SIFSAQFTNV HGKPSLAEMG CYGLGVTRIL AAVIEALATE DCIRWPSLLA 401 450 ENSTTRP00000000674/1-472 PYQVCLISPK KGSKEEAATE LTGHLYDHIT EAVPQLRGEV LLDDRTHLTI ENSP00000360327/1-475 PYQACLIPPK KGSKEQAASE LIGQLYDHIT EAVPQLHGEV LLDDRTHLTI ENSBTAP00000050033/1-475 PYQVCLIPPK KGSKEEAAAE LAGDLYNHIT EAVPQLQGEV LLDDRTHLTI bmy_14871T0/1-507 PYQVCLISPK KGSKEEAAAE LTGHLYDHIT EAVPQLQGEV LLDDRTHLTI BACU000235/1-475 PYQVCLISPK KGSKEEAAAE LTGHLYDHIT EAVPQLRGEV LLDDRTHLTI 451 500 ENSTTRP00000000674/1-472 GNRLKDANKF GYPFVIIAGK RALDDPAHFE VWCQNTGEVV FLTREGVLEL ENSP00000360327/1-475 GNRLKDANKF GYPFVIIAGK RALEDPAHFE VWCQNTGEVA FLTKDGVMDL ENSBTAP00000050033/1-475 GNRLKDANKL GYPFVIIAAK RALDDPAHFE VWCQNTGEVV FLTREGVLEL bmy_14871T0/1-507 GNRLKDANKF GYPFVIIAGK RALDDPAHFE VWCQNTGEVV FLTREGVLEL BACU000235/1-475 GNRLKDANKF GYPFVIIAGK RALDDPAHFE VWCQNTGKVV FLTREGVLEL 501 550 ENSTTRP00000000674/1-472 LSQVQVV ENSP00000360327/1-475 LTPVQTV ENSBTAP00000050033/1-475 LSQVQVV bmy_14871T0/1-507 LSQVQVV BACU000235/1-475 LSQVQVV