KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:05 2014 Check: 00 .. Name: ENSTTRP00000012176/1-664 Len: 742 Check: 9343 Weight: 1.00 Name: ENSP00000310688/1-740 Len: 742 Check: 4447 Weight: 1.00 Name: ENSBTAP00000050050/1-741 Len: 742 Check: 6656 Weight: 1.00 Name: bmy_12948T0/1-378 Len: 742 Check: 6190 Weight: 1.00 Name: BACU020010/1-669 Len: 742 Check: 6771 Weight: 1.00 // 1 50 ENSTTRP00000012176/1-664 MIHMLNAAAD RVKWTRSRTA KRAACVVAAA YALKTLCPII GKRLKQSGHC ENSP00000310688/1-740 MTHMLNAAAD RVKWTRSSAA KRAACLVAAA YALKTLYPII GKRLKQSGHG ENSBTAP00000050050/1-741 MIHMLNAAAD RVKWTRSRAA KRAACVVAAA YALKTLYPII GKHLKQSGHR bmy_12948T0/1-378 MIHMLNAAAD RVKWTRSRTA KRAACVVAAA YALKTLCPII GKRLKQSGHW BACU020010/1-669 MIHMLNAAAD RVKWTRSRTA KRAACVVAAA YALKTLSPII GKRLKQSGHC 51 100 ENSTTRP00000012176/1-664 KK--EAYPAA E-REILHCTX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000310688/1-740 KKKAAAYPAA ENTEILHCTE TICEKPSPGV NADFFKQLLE LRKILFPKLV ENSBTAP00000050050/1-741 KKK-GAYPAA ENREILHCTE ATCKKPSPGV NADFFKQLLE LRKILFPKLV bmy_12948T0/1-378 KKK-EAYPAA ENREILHCTE ATCKKPSPGV NADFFKQLLE LRKILFPKLV BACU020010/1-669 KKK-EAYPAA ENREILHCTE ATCKKPSPGV NADFFKQLLE LRKILFPKLV 101 150 ENSTTRP00000012176/1-664 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXKW ENSP00000310688/1-740 TTETGWLCLH SVALISRTFL SIYVAGLDGK IVKSIVEKKP RTFIIKLIKW ENSBTAP00000050050/1-741 TTETGWLCLH SVALISRTFL SIYVAGLDGK IVKSIVEKKP RTFIIKLIKW bmy_12948T0/1-378 TTETGWLCLH SVALISRTFL SIYVAGLDGK IVKSIVEKKP RTFIIKLIKW BACU020010/1-669 TTETGWLCLH SVALISRTFL SIYVAGLDGK IVKSIVEKKP RTFIIKLIKW 151 200 ENSTTRP00000012176/1-664 LMIAIPATFV NSAIRYLEGK LALAFRTRLV DHAYETYFTN QTYYKVINMD ENSP00000310688/1-740 LMIAIPATFV NSAIRYLECK LALAFRTRLV DHAYETYFTN QTYYKVINMD ENSBTAP00000050050/1-741 LMIAIPATFV NSAIRYLEGK LALAFRTRLV DHAYETYFAN QTYYKVINMD bmy_12948T0/1-378 LMIAIPATFV NSAIRYLEGK LALAFRTRLV DHAYETYFTN QTYYKVINMD BACU020010/1-669 LMIAIPATFV NSAIRYLEGK LALAFRTRLV DHAYETYFTN QTYYKVINMD 201 250 ENSTTRP00000012176/1-664 GRLANPDQSL TEDIMMFSQS VAHLYSNLTK PILDVILTSY TLIKTATSRG ENSP00000310688/1-740 GRLANPDQSL TEDIMMFSQS VAHLYSNLTK PILDVMLTSY TLIQTATSRG ENSBTAP00000050050/1-741 GRLANPDQSL TEDIMMFAQS VAHLYSNLTK PILDVILTSY TLIQTATSRG bmy_12948T0/1-378 GRLANPDQSL TEDIMMFSQS VAHLYSNLTK PILDVILTSY TLIRTATSRG BACU020010/1-669 GRLANPDQSL TEDIMMFSQS VAHLYSNLTK PILDVILTSY TLIKTATSRG 251 300 ENSTTRP00000012176/1-664 ASPIGPTLLA GLVVYATAKV LKACSPKFGK LVAEEAHRKG YLRYVHSRII ENSP00000310688/1-740 ASPIGPTLLA GLVVYATAKV LKACSPKFGK LVAEEAHRKG YLRYVHSRII ENSBTAP00000050050/1-741 ASPIGPTVLA GLVVYATAKV LKACSPKFGK LVAEEAHRKG YLRYVHSRII bmy_12948T0/1-378 ASPIGPTLLA GLVVYATAKV LKACSPKFGK LVAEEAHRKG YLRYVHSRII BACU020010/1-669 ASPIGPTLLA GLVVYATAKV LKACSPKFGK LVAEEAHRKG YLRYVHSRII 301 350 ENSTTRP00000012176/1-664 ANVEEIAFYR GHKVEMKQLQ KSYKALANQM NLILSKRLWY IMIEQFLMKY ENSP00000310688/1-740 ANVEEIAFYR GHKVEMKQLQ KSYKALADQM NLILSKRLWY IMIEQFLMKY ENSBTAP00000050050/1-741 ANVEEIAFYR GHKVEMNQLQ KSYKALANQM NLILSKRLWY IMIEQFLMKY bmy_12948T0/1-378 ANVEEIAFYR GHKVEMKQLQ KSYKALANQM NLILSKRLWY IMIEQFLMKY BACU020010/1-669 ANVEEIAFYR GHKVEMKQLQ KSYKALANQM NLILSKRLWY IMIEQFLMKY 351 400 ENSTTRP00000012176/1-664 VWSSSGLIMV ALPIITATGF ADGE--DDRK QAMVSERTEA FTTARNLLAS ENSP00000310688/1-740 VWSSSGLIMV AIPIITATGF ADGE--DGQK QVMVSERTEA FTTARNLLAS ENSBTAP00000050050/1-741 VWSSSGLIMV AVPIITATGF ADGDLEDGQK QAMVSERTEA FTTARNLLAS bmy_12948T0/1-378 VWSSSGLIMV ALPIITATGF ADGG------ ---------- ---------- BACU020010/1-669 VWSSSGLIMV ALPIITATGF ADGDLEDDRK QAMVSERTEA FTTARNLLAS 401 450 ENSTTRP00000012176/1-664 GADAIERIMS SYKEXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000310688/1-740 GADAIERIMS SYKEVTELAG YTARVYNMFW VFDEVKRGIY KRTAVIQESE ENSBTAP00000050050/1-741 GADAIERIMS SYKEITELAG YTARVYNMFW VFDEVKRGIY KRTAVLQECE bmy_12948T0/1-378 ---------- ---------- ---------- ------NGIY A--------- BACU020010/1-669 GADAIERIMS SYKEVLAFLV INLIKIRYMK ITQKLKRGIY KRAAVLQESE 451 500 ENSTTRP00000012176/1-664 XXXXXXXXXX XXXXXXXXXX XKVIDVDHGI ICENVPIITP TGEVVASKLK ENSP00000310688/1-740 SHSKNGAKVE LPLSDTLAIK GKVIDVDHGI ICENVPIITP AGEVVASRLN ENSBTAP00000050050/1-741 NHSKGGANIE IPLSETLEIK GKVIDVEHGI ICENVPIITP TGEVVASRLN bmy_12948T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU020010/1-669 NHSKSRANVE LPLSETLEIK GKVIDVDHGI ICENVPIITP TGEVVASKLN 501 550 ENSTTRP00000012176/1-664 FKVEEGMHLL ITGPNGCGKS SLFRILSGLW PVYEGILYKP PPQHMFYIPQ ENSP00000310688/1-740 FKVEEGMHLL ITGPNGCGKS SLFRILSGLW PVYEGVLYKP PPQHMFYIPQ ENSBTAP00000050050/1-741 FKVEEGMHLL ITGPNGCGKS SLFRILSGLW PVYEGVLYKP PPQHMFYIPQ bmy_12948T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU020010/1-669 FKVEEGMHLL ITGPNGCGKS SLFRILSGLW PVYEGILYKP PPQHMFYIPQ 551 600 ENSTTRP00000012176/1-664 RPYMSLGSLR DQVIYPDSVD DMHDKGYTDH DLDCILHNVH LYHIVQREGG ENSP00000310688/1-740 RPYMSLGSLR DQVIYPDSVD DMHDKGYTDQ DLERILHNVH LYHIVQREGG ENSBTAP00000050050/1-741 RPYMSLGSLR DQVIYPDSVD DMHDKGYTDH DLDCILHSVH LYHIVQREGG bmy_12948T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU020010/1-669 RPYMSLGSLR DQVIYPDSVD DMHGKGYTDH DLDCILHNVH LYHIVQREGG 601 650 ENSTTRP00000012176/1-664 WDAVMDWKDV LSGGEKQRMG MARMFYHRPK YALLDECTSA VSIDVEGKIF ENSP00000310688/1-740 WDAVMDWKDV LSGGEKQRMG MARMFYHKPK YALLDECTSA VSIDVEGKIF ENSBTAP00000050050/1-741 WDAIMDWKDV LSGGEKQRMG MARMFYHRPK YALLDECTSA VSIDVEGKIF bmy_12948T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU020010/1-669 WDAVMDWKDV LSGGEKQRMG MARMFYHRPK YALLDECTSA VSIDVEGKIF 651 700 ENSTTRP00000012176/1-664 QAAKGAGISL LSITHRPSL- ---------- ---------- ---------- ENSP00000310688/1-740 QAAKGAGISL LSITHRPSLW KYHTHLLQFD GEGGWRFEQL DTAIRLTLSE ENSBTAP00000050050/1-741 QAAKGAGISL LSITHRPSLW KYHTHLLQFD GEGGWRFEQL DSAIRLTLSE bmy_12948T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU020010/1-669 QAAKGTGISL LSITHRPSLW ---------- ---------- ---------- 701 750 ENSTTRP00000012176/1-664 ---------- ---------- ---------- ---------- -- ENSP00000310688/1-740 EKQKLESQLA GIPKMQQRLN ELCKILGEDS VLKTIKNEDE TS ENSBTAP00000050050/1-741 EKQKLESQLA GIPKMQQRLN ELCKILGEDS VLKTIKNEDE TS bmy_12948T0/1-378 ---------- ---------- ---------- ---------- -- BACU020010/1-669 ---------- ---------- ---------- ---------- --