KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:07 2014 Check: 00 .. Name: ENSTTRP00000012681/1-328 Len: 458 Check: 5132 Weight: 1.00 Name: ENSP00000377970/1-137 Len: 458 Check: 5464 Weight: 1.00 Name: ENSBTAP00000050140/1-260 Len: 458 Check: 3548 Weight: 1.00 Name: bmy_02998T0/1-243 Len: 458 Check: 2870 Weight: 1.00 Name: BACU013707/1-456 Len: 458 Check: 359 Weight: 1.00 // 1 50 ENSTTRP00000012681/1-328 ---------- ---------- ---------- ---------- ---------- ENSP00000377970/1-137 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050140/1-260 ---------- ---------- ---------- ---------- ---------- bmy_02998T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013707/1-456 MPTAKKLANI GYKTFSTSMM LLTVSQSRTD EETEKRPCID ANGGEDCTAA 51 100 ENSTTRP00000012681/1-328 ---------- MAKWGQGDPR WIVEEREDGT NVNNW----- ---------- ENSP00000377970/1-137 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050140/1-260 ---------- MAKWGQGDPR WIVEEREDGT NVNNW----- ---------- bmy_02998T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013707/1-456 NTEMNNSGDE EKTLVPTRPG ILVQRRSKAV VATRLGNGGD VKDEEEDKIK 101 150 ENSTTRP00000012681/1-328 ---------- ---------- ---------- ---------- ---------H ENSP00000377970/1-137 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050140/1-260 ---------- ---------- ---------- ---------- ---------H bmy_02998T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013707/1-456 EKQKAENAGE NGQENDCLQK PPIPVTGSPS VVDNHKRPLK GVTFSREMSF 151 200 ENSTTRP00000012681/1-328 WTERDATSWS KGKLRELLVG IAVENEAGRC EISELKQVEG EASCSSRKGK ENSP00000377970/1-137 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050140/1-260 WTERDATSWS KGRLRELLVG ITVENEAGRC EISELKQVEG EASCSSRKGK bmy_02998T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013707/1-456 RTERDATSWS KGKLHELLVG IAVENEAGRC EISELKQVEG EASCSSRKGK 201 250 ENSTTRP00000012681/1-328 LIFFYEWNIK LGWKGIIKES GVKHKGLIEI PNLSEENEVD DAEVS-SKKK ENSP00000377970/1-137 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050140/1-260 LIFFYEWNIK LGWKGIIRES GAKHKGLIEI PSLSEENEVD DTEVNVSKKK bmy_02998T0/1-243 ---------- -----IIKES GAKHKGLIEI PNLSEENEVD DTEVNVSKKK BACU013707/1-456 LIFFYEWNIK LGWKGIIKES GAKHKGLIEI PNLSEENEVD DTEVNVSKKK 251 300 ENSTTRP00000012681/1-328 GDGNILKDLM KTAGTAKVRE ALGDYLKALK TEFTMGMILP TKAMATQELT ENSP00000377970/1-137 ---------- ---------- ---------- ------MILP TKAMATQELT ENSBTAP00000050140/1-260 GDGDILKDLM KTAGTAKVRE ALGDYLKALK TEFTMGMILP TKAMAAQELT bmy_02998T0/1-243 GDGNILKDLM KTAGTAKVRE ALGDYLKALK TEFTMGMILP TKAMATQELT BACU013707/1-456 GDGNILKDLM KTAGTAKVRE ALGDYLKALK TEFTMGMILP TKAMATQELT 301 350 ENSTTRP00000012681/1-328 VKRKLSETTL --QASSPVXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000377970/1-137 VKRKLSGNTL QVQASSPVAL GVRIPTVALH MMELFDTTVE QLYSIFTVKE ENSBTAP00000050140/1-260 VERKLSENAL QIQASSRVAL GVRIPTVALH MTELFDTAIE QLYRIFTVKD bmy_02998T0/1-243 VKRKLSETTL QIQASSPVAL GVRIPTVALH MTELFDTAIE QLYRIFTVKD BACU013707/1-456 VKRKLSETTL --QASSPVAL GVRIPTVALH MTELFDTAIE QLYRIFTVKD 351 400 ENSTTRP00000012681/1-328 LVQKFSKSPA VLEAEKGRKF QMFDGNITGE YVELLTNKKI VMKWRCRNWP ENSP00000377970/1-137 L--------- ---------- ---------- -----TNKKI IMKWRCGNWP ENSBTAP00000050140/1-260 LVQKFSKSPA VLEAEKGGKF QML------- ---------- ---------- bmy_02998T0/1-243 LVQKFSKSPA VLEAEKGRKF QMFDGNITGE YVELLTNKKI VMKWRCRNWP BACU013707/1-456 LVQKFSKSPA VLEAEKGRKF QMFDGNISGE YVELLTNKKI VMKWRCRNWP 401 450 ENSTTRP00000012681/1-328 EEHYAIVALN FVPTLGQTEL QLK-EFLS-- EEENMKFCWQ KQHFEEIQGL ENSP00000377970/1-137 EEHYAMVALN FVPTLGQTEL QLK-EFLSIC KEENMKFCWQ KQHFEEIKGS ENSBTAP00000050140/1-260 --------ME TSPV------ ---------- ---NIQNC-- ---------- bmy_02998T0/1-243 EEHYAIVALN FVPTLGQTEL QLDCKGVPVC EEENMKFCWQ KQHFEEIQGL BACU013707/1-456 EEHYAIVALN FVPTLGQTEL QLDCKGVPVC EEENMKFCWQ KQHFEEIQGL 451 500 ENSTTRP00000012681/1-328 LQLITLNG ENSP00000377970/1-137 LQLTPLNG ENSBTAP00000050140/1-260 -------- bmy_02998T0/1-243 LQLITLNG BACU013707/1-456 LQLITLNG