KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:08 2014 Check: 00 .. Name: ENSP00000344579/1-825 Len: 915 Check: 9912 Weight: 1.00 Name: ENSBTAP00000050184/1-818 Len: 915 Check: 9576 Weight: 1.00 Name: bmy_19684T0/1-417 Len: 915 Check: 6864 Weight: 1.00 Name: BACU009355/1-410 Len: 915 Check: 1170 Weight: 1.00 // 1 50 ENSP00000344579/1-825 ---------- ---------- -------MVG KSQQTDVIEK KKHMAIPKSS ENSBTAP00000050184/1-818 MEEKDESEQS ISAGRQEIRK RRRPSQPMVD KSQQTEVTEK KKQLSIPQSS bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---------- BACU009355/1-410 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000344579/1-825 SPKATHRIGN TSGSKGSYSA KAYESIRVSS ELQQTWTKRK HGQEMTSKSL ENSBTAP00000050184/1-818 GPKAALSIGN IPGSK----- LNYECHRVSS QLQQTWIKRK RVQDMADKSL bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---------- BACU009355/1-410 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000344579/1-825 QTDTIVEEKK -EVKLVEETV VPEEKSADVR EAAIELPESV QDVEIPPNIP ENSBTAP00000050184/1-818 QTETIAEEKK EEIKLVCEAV VPEEKPAAV- EVGPEFPESV REVEVPPNRY bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---------- BACU009355/1-410 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000344579/1-825 SVQLKMDRSQ QTSRTGYWTM MNIPPVEKVD KEQQTYFSES EIVVISRPDS ENSBTAP00000050184/1-818 SVQVKIDRSQ QTTCTGDWTM MNFPQKDKLD KEQQTYFSES EIVVIGWPTN bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---------- BACU009355/1-410 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000344579/1-825 SSTKSKEDAL KHKSSGKIFA SEHPEFQPAT NSNEEIGQKN ISRTSFTQET ENSBTAP00000050184/1-818 SFSKSKEGAQ KRKSSGNIFL SEHPEFQPTT SSNEEIRRPS ISRTVSISPT bmy_19684T0/1-417 --------MQ KRKSSGKIFV TEHPEFQPTT SNNEEIRQQS INRALSIPPT BACU009355/1-410 MLFQSQRKVQ KRKSSGKIFV SEHPEFQPTT SNNEEIRQQS INRALSIPPT 251 300 ENSP00000344579/1-825 KKGPPVLLED ELREEVTVPV VQEGSAVKKV ASAEIEPPST EKFPAKIQPP ENSBTAP00000050184/1-818 KKDSPVPLED E--------- --------KD VPVEVQPPAA EEISAEEQLP bmy_19684T0/1-417 KKDAPVLLED G--------- --------KD VPAEVQPPAA EEISAEVQLP BACU009355/1-410 KKDAPVLLED G--------- --------KD VPAEVQPPAA EESSAEVQLP 301 350 ENSP00000344579/1-825 LVEEATAKAE PRPAEETHVQ VQPSTEETPD AEAATAVAEN SVKVQPPPAE ENSBTAP00000050184/1-818 LA-ETTSE-- ---------- ---------- ---------- ---------- bmy_19684T0/1-417 LTEEITAE-- ---------- ---------- ---------- ---------- BACU009355/1-410 LAEEITAE-- ---------- ---------- ---------- ---------- 351 400 ENSP00000344579/1-825 EAPLVEFPAE IQPPSAEESP SVELLAEILP PSAEESPSEE PPAEILPPPA ENSBTAP00000050184/1-818 -----EVPVA VQPPPAEEPP -----LEAQP SPTEEAPGDE APAKVEPTPA bmy_19684T0/1-417 -----EVSAE VQPPASEEAP -----AEVQP STAEEPPGDE APAKVEP--- BACU009355/1-410 -----EVSAE VQPPASEEAS -----VEVQP SPAEEPPEDE APAKVEP--- 401 450 ENSP00000344579/1-825 EKSPSVELLG EIRSPSAQKA PIEVQPLPAE GALEEAP--- ---AKVEPPT ENSBTAP00000050184/1-818 EEALS----- --EKPPAEEA LVEIQPSPVE EAAGDEAPAK VEATSSEETL bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---TSAEETL BACU009355/1-410 ---------- ---------- ---------- ---------- ---TSAEEAL 451 500 ENSP00000344579/1-825 VEETLADVQP LLPEEAPREE ARELQLSTAM ETPAEEAPTE FQSPLPKETT ENSBTAP00000050184/1-818 LKEPLTEVQP PAAEEAPIQD TPELQLSPAV EAPAEEAPAE AEPP-PAEEA bmy_19684T0/1-417 LKEPPAEVQP PAAEDAPTQE VPELHISPAV ESPAEEAPAE VESP-PAEVA BACU009355/1-410 LKELRAEVQP PAAEDAPTQE VPELQ----- ---------- ---------- 501 550 ENSP00000344579/1-825 AEEASAEIQL LAATEPPADE TPAEARSPLS EETSAEEAHA EVQSPLAEET ENSBTAP00000050184/1-818 PAEEAPEVQS PPAEEAPAEE PP-EIQSPPA EEAPAEEP-P EVQSPPAEEA bmy_19684T0/1-417 SA----ELQS LPAEEAPAEE VP-------- ---------- EVQSLPAEET BACU009355/1-410 ---------- --TEEAPAEE VP-------- ---------- EVQSLPAEET 551 600 ENSP00000344579/1-825 TAEEASAEIQ LLAAIEAPAD ET-------- -------PAE AQSPLSEETS ENSBTAP00000050184/1-818 PAEEAP-EVQ SPPAEEAPAE EPPEVQSPPA EEVPAGEPPE VQSPPAEEAP bmy_19684T0/1-417 PAEEATEEVQ SAQTENAPAE KS-------- -------SAN IQSLPTEETS BACU009355/1-410 PAEEAPEEVQ SAQAENAPAE KS-------- -------SAN IQSPPTEETS 601 650 ENSP00000344579/1-825 AEEAPAEVQS PSAKGVSIEE APLELQPPSG EETTAEEASA AIQLLAATEA ENSBTAP00000050184/1-818 AEEAP-EVQS PPAEEVPAEE ALAEVEPPPA EEAPAGEPS- EVQSPPAEEA bmy_19684T0/1-417 AEEVPEEVQS LPAEDIPAEE ASTKVQPP-- ---------- ---------- BACU009355/1-410 AEEVPEEVQS LPAEDTHAEE ASAKVQPPPA KEAPAEEAS- T--------- 651 700 ENSP00000344579/1-825 SAEEAPAEVQ PPPAEEAPA- ---------- ---------E VQPPPAEEA- ENSBTAP00000050184/1-818 PAEEAP-EVQ SPPSEEAPAE EAPEVQSVPA GQAPAEEPLE VQPPPAEDAT bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ----PAEKT- BACU009355/1-410 ---------- ---------- ---------- ---------K VQSPPAEKT- 701 750 ENSP00000344579/1-825 ---PAEVQPP PAEEAPAE-- --VQPPPAEE AP----AEVQ PPPAEEAPAE ENSBTAP00000050184/1-818 EEEASEVQSL PTDEAPAEEG LGFQSPPADK APEEEAPEVQ SPPAEEAPAE bmy_19684T0/1-417 ---------- ---------- ---------- ---------- ---------- BACU009355/1-410 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000344579/1-825 VQP------- --PPAEEAPA EVQSLPAEET PIEETLAAVH SPPADDVPAE ENSBTAP00000050184/1-818 EPPEVQSLPA DEAPAEEATE EVQSPPTEES PAEEAPAELQ PPSTEETTSE bmy_19684T0/1-417 ---------- ---LAEEAAA ELQPLPAEEP SAEETPAEFQ PPSTEETTSE BACU009355/1-410 ---------- ---LAEEAAA ELQPLPAEEP SAEEAPAEFQ PPSTEETTSE 801 850 ENSP00000344579/1-825 EASVDKHSPP ADLLLTEEFP IGEASAEVSP PPSEQTPEDE ALVENVSTEF ENSBTAP00000050184/1-818 MVSVEKQPSL TEEPFITPIS LEETSAEVLL PPFEQTPADE ALVENVSPVD bmy_19684T0/1-417 MFSVDKQSSL AEVSFITQIS IKETSAEVLL PPSEQTPTDE ALVENVSMVY BACU009355/1-410 MFSVDKQSSL AEASFITQIS IKETSAEVLL PPSEQTPEDE ALVENVSMVY 851 900 ENSP00000344579/1-825 QSPQVAGIPA VKLGSVVLEG EAKFEEVSKI NSVLKDLSNT NDGQAPTLEI ENSBTAP00000050184/1-818 QAPKEADVLV EKLESGNLDD KPKSEEPLER DTIPKDSSGT KNEGV-SFEI bmy_19684T0/1-417 QSPQAADILV VKLGSGVLED KPKSEEPSEW DTVPEDSSDT KNEEV-SIKI BACU009355/1-410 QSPQAADILV VKLGSGILED KPKSEEPLEW DAVPEDSSDT KNEEV-SIKI 901 950 ENSP00000344579/1-825 ESVFHIELKQ RPPEL ENSBTAP00000050184/1-818 KGVIHIELE- ----- bmy_19684T0/1-417 KGVIHIELE- ----- BACU009355/1-410 KGVIHIELE- -----