KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:09 2014 Check: 00 .. Name: ENSP00000444537/1-300 Len: 302 Check: 2842 Weight: 1.00 Name: ENSBTAP00000050215/1-301 Len: 302 Check: 7184 Weight: 1.00 Name: bmy_10090T0/1-298 Len: 302 Check: 1385 Weight: 1.00 Name: BACU009090/1-298 Len: 302 Check: 409 Weight: 1.00 // 1 50 ENSP00000444537/1-300 MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKLEEE GEEEWDDDQE ENSBTAP00000050215/1-301 MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKSEEE -EEEWDDERE bmy_10090T0/1-298 MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKLEEE -EEEWDDEQE BACU009090/1-298 MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKLEEE -EEEWDDEQE 51 100 ENSP00000444537/1-300 LDEEEPDIWF DFETMARPWT EDGDWTEPGA PGGTEDRPSG GGKANRAHPI ENSBTAP00000050215/1-301 LDDEEREIWF DLTTMARPWS EDGDWTEPGA PGGAEDRPSG GGKASRTYLV bmy_10090T0/1-298 LDEEEPELWF DFTTMARPWS EDGDWTEPGA PGGTEDRPSG GGKANRTHPV BACU009090/1-298 LDEEEPEIWF DFTTMARPWS EDGDWTEPGA PGGTEDRPSG GGKANRTHPV 101 150 ENSP00000444537/1-300 KQRPFPYEHK NTWSAQNCKN GSCVLDLSKC LFIQGKLLFA EPKDAGFPFS ENSBTAP00000050215/1-301 KQRPFPYEHK NTWSAQSFKN FCCALGLSKG PFIQGKMLLA EPKDASFSFS bmy_10090T0/1-298 KQRPFPYERK NTWSAQSFKN FSCVLGLSKC PSIQGKVLLA QPRDTGFSFS BACU009090/1-298 KQRPFPYERK NTWSAQSFKN FSCVLGLSKC PFIQGKVLLA QPRDTGFSFS 151 200 ENSP00000444537/1-300 QDINSHLASL SMARNTSPTP DPTVRE--AL CAPDNLNASI ESQGQIKMYI ENSBTAP00000050215/1-301 HDINSHLASL SIDGNTIPTP DPAVEEGKAL YVPDNLNASV ENQGQMKTCI bmy_10090T0/1-298 HDINSHLARL SIAGNTIPIP DPAVE---AF CAPDNLNASV ANQGQIKMYI BACU009090/1-298 HDINSHLAGL SIAGNTIPIP DPAVE---AF CAPDDLNASV ANQGQIKMYI 201 250 ENSP00000444537/1-300 NEVCRETVSR CCNSFLQQAG LNLLISMTVI NNMLAKSASD LKFPLISEGS ENSBTAP00000050215/1-301 SQVCRETVSL CCNSFLQQAG LNLLISMTVI KNMLAKSVPG LMLPLIPEGS bmy_10090T0/1-298 NEVCRETVSL CCNSFLQQAG LNLLIIMTVI NNMLAKSVSG LKFPLIPEGS BACU009090/1-298 NEVCRETVSL CCNSFLQQAG LNLLIIMTVI NNMLAKSVSG LKFPLIPEGS 251 300 ENSP00000444537/1-300 GCAKVQVLKP LMGLSEKPVL AGELVGAQML FSFMSLFIRN GNREILLETP ENSBTAP00000050215/1-301 ECAEGQVVKP LTGLSEKPAL SGELLRAQVL WPFLPLFIRN TNRQLLSETL bmy_10090T0/1-298 ECAEGHVVKP LMGLSEKPVL AGELLGAQML LSFLSLFIRN ANRQLLPEIP BACU009090/1-298 ECAEGHVVKP LMGLSEKPVL AGELLGAQML LSFLSLFIRN ANRQLLPEIP 301 350 ENSP00000444537/1-300 AP ENSBTAP00000050215/1-301 AS bmy_10090T0/1-298 AS BACU009090/1-298 AS