KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:00:09 2014  Check: 00 ..

 Name: ENSTTRP00000015610/1-211  Len:    211  Check:  2520  Weight:  1.00
 Name: bmy_04070T0/1-159         Len:    211  Check:  3911  Weight:  1.00
 Name: BACU016265/1-211          Len:    211  Check:  2578  Weight:  1.00
 Name: ENSP00000362271/1-194     Len:    211  Check:  3312  Weight:  1.00
 Name: ENSBTAP00000050234/1-194  Len:    211  Check:  1845  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000015610/1-211  MWACCSAPDA RSVEDANAQE KLKKTRIIFV VGGPGSGKGT QCEKIVQKYG 
bmy_04070T0/1-159         MRACCSAPDA RSVEDANARE KLKKTKIIFV VGGPGSGKGT QCEKIVQKYG 
BACU016265/1-211          MRACCSAPDA RSVEDANARE KLKKTKIIFV VGGPGSGKGS QCEKIVQKYG 
ENSP00000362271/1-194     ---------- -------MEE KLKKTKIIFV VGGPGSGKGT QCEKIVQKYG 
ENSBTAP00000050234/1-194  ---------- -------MEE KLKKTKIIFV VGGPGSGKGT QCEKIVQKYG 


                          51                                                 100
ENSTTRP00000015610/1-211  YTHLSTGDLL RAEVSSGSAR GKMLSEIMEK GQLVPLDTVL DMLRDAMLAK 
bmy_04070T0/1-159         YTHLSTGDLL RAEVSSGSAR GKMLSEIMEK GQLVPL---- ---------- 
BACU016265/1-211          YTHLSTGDLL RAEVSSGSAR GKMLSEIMEK GQLVPLDTVL DMLRDAIVAK 
ENSP00000362271/1-194     YTHLSTGDLL RSEVSSGSAR GKKLSEIMEK GQLVPLETVL DMLRDAMVAK 
ENSBTAP00000050234/1-194  YTHLSTGDLL RAEVSSGSAR GKMLSEIMEK GQLVPLETVL DMLRDAMVAK 


                          101                                                150
ENSTTRP00000015610/1-211  VDTSKGFLID GYPREVKQGE EFERRIGHPT LLLYVDAGPE TMTKRLLKRG 
bmy_04070T0/1-159         ---------- ---------- -----IGHPT LLLYVDAGPE TMTKRLLKRG 
BACU016265/1-211          VDTSKGFLID GYPREVRQGE EFERRIGHPT LLLYVDAGPE TMTKRLLKRG 
ENSP00000362271/1-194     VNTSKGFLID GYPREVQQGE EFERRIGQPT LLLYVDAGPE TMTQRLLKRG 
ENSBTAP00000050234/1-194  VDTSKGFLID GYPREVQQGE EFERRIAQPT LLLYVDAGPE TMTKRLLKRG 


                          151                                                200
ENSTTRP00000015610/1-211  ETSGRVDDNE ETIKKRLETY YKATEPVIAF YEKRGIIRKV NAEGSVDSVF 
bmy_04070T0/1-159         ETSGRVDDNE ETIKKRLETY YKATEP---- ---------V NAEGSVDSVF 
BACU016265/1-211          ETSGRVDDNE ETIKKRLETY YKATEPVIAF YEKRGIIRKV NAEGSVDSVF 
ENSP00000362271/1-194     ETSGRVDDNE ETIKKRLETY YKATEPVIAF YEKRGIVRKV NAEGSVDSVF 
ENSBTAP00000050234/1-194  ETSGRVDDNE ETIKKRLETY YKATEPVIAF YEKRGIVRKV NAEGSVDNVF 


                          201                                                250
ENSTTRP00000015610/1-211  SQVCTHLDAL K 
bmy_04070T0/1-159         SQVCTHLDTL K 
BACU016265/1-211          SQVCTHLDAL K 
ENSP00000362271/1-194     SQVCTHLDAL K 
ENSBTAP00000050234/1-194  SQVCTHLDAL K