KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:00:11 2014  Check: 00 ..

 Name: ENSBTAP00000050283/1-193  Len:    220  Check:  5804  Weight:  1.00
 Name: bmy_10257T0/1-216         Len:    220  Check:  491  Weight:  1.00
 Name: ENSP00000347055/1-197     Len:    220  Check:  6920  Weight:  1.00
 Name: BACU006147/1-193          Len:    220  Check:  8782  Weight:  1.00
 Name: ENSTTRP00000012869/1-193  Len:    220  Check:  578  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000050283/1-193  MPPKKPEPKK EVAKPATAPA ASPAPPPEP- ---LKEPAFD PKSVKVSYTS 
bmy_10257T0/1-216         MPPKKPEPKK EAAKAASAPA LASAPPPEP- ---PKEPAFD PKSVKIDFTA 
ENSP00000347055/1-197     MAPKKPEPKK EAAKPAPAPA PAPAPAPAPA PEAPKEPAFD PKSVKIDFTA 
BACU006147/1-193          MPPKKPEPKK EAAKVASAPA LASAPPPEL- ---HKEPAFD PKSIKIDFTA 
ENSTTRP00000012869/1-193  MPPKKPEPKK EAPKAASAPA PASAPPPEP- ---PKEPAFD PKSVKIDFTA 


                          51                                                 100
ENSBTAP00000050283/1-193  TYVTEFKEAF SLFDRTPTGE LKIAYGQCGD VLRALGQNPT NAEVLRVLGK 
bmy_10257T0/1-216         DQIEEFKEAF SLFDRTPTGE LKITYGQCGD VLRALGQNPT NAEVLRVLGK 
ENSP00000347055/1-197     DQIEEFKEAF SLFDRTPTGE MKITYGQCGD VLRALGQNPT NAEVLRVLGK 
BACU006147/1-193          DQIEEFKEAF SLFDRTPKGE LKITYGQCGD VLRALGQNPT NAEVLRVLGK 
ENSTTRP00000012869/1-193  DQIEEFKEAF SLFDRTPTGE LKITYGQCGD VLRALGQNPT NAEVLRVLGK 


                          101                                                150
ENSBTAP00000050283/1-193  PKPEEMNSKM LDFETFLPIL QHISRNKEQG TYEDFVEGLR VFDKESNGTV 
bmy_10257T0/1-216         PKPEEMNAKM LDFETFLPIL QHISRNKEQG TYEDFVEGLR VFDKESNGTV 
ENSP00000347055/1-197     PKPEEMNVKM LDFETFLPIL QHISRNKEQG TYEDFVEGLR VFDKESNGTV 
BACU006147/1-193          PKPEEMNAKM LDFETFLPIL QHISRNKEQG TYEDFVEGLR VFDKESNGTV 
ENSTTRP00000012869/1-193  PKPEEMNTKM LDFETFLPIL QHISRNKEQG TYEDFVEGLR VFDKESNGTV 


                          151                                                200
ENSBTAP00000050283/1-193  MGAELRHVLA TLGEKMSEAE VEQLLAGQED ANGCINYEAF ---------- 
bmy_10257T0/1-216         MGAELRHVLA TLGEKMTEAE VEQLLAGQED ANGCINYEGI GSCCASPVTQ 
ENSP00000347055/1-197     MGAELRHVLA TLGEKMTEAE VEQLLAGQED ANGCINYEAF ---------- 
BACU006147/1-193          MGAELRHVLA TLGEKMTEAE VEQLLAGQED ANGCINYEAF ---------- 
ENSTTRP00000012869/1-193  MGAELRHVLA TLGEKMTEAE VEQLLAGQED ANGCINYEAF ---------- 


                          201                                                250
ENSBTAP00000050283/1-193  ---VKHIMSG ---------- 
bmy_10257T0/1-216         RWGVGYSWAG LGCRQNRCRS 
ENSP00000347055/1-197     ---VKHIMSG ---------- 
BACU006147/1-193          ---VKHIMSG ---------- 
ENSTTRP00000012869/1-193  ---VKHIMSG ----------