KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:11 2014 Check: 00 .. Name: bmy_14590T0/1-375 Len: 448 Check: 7538 Weight: 1.00 Name: ENSP00000262139/1-446 Len: 448 Check: 197 Weight: 1.00 Name: ENSBTAP00000050288/1-439 Len: 448 Check: 6543 Weight: 1.00 Name: BACU019970/1-367 Len: 448 Check: 3239 Weight: 1.00 Name: ENSTTRP00000011948/1-387 Len: 448 Check: 9485 Weight: 1.00 // 1 50 bmy_14590T0/1-375 MCSSDRAGEV SGVRAEPTG- ---------- -AAGLGWTLA ALDR----GH ENSP00000262139/1-446 MEAEAADAPP GGVESALSCF SFNQDCTSLA TGTKAGYKLF SLSSVEQLDQ ENSBTAP00000050288/1-439 -------GAS GGAEAALSCF SFNQDCTSLA IGTKAGYKLF SLSSVEQLDH BACU019970/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011948/1-387 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14590T0/1-375 LRGAGDMPAV AWTRSVSNHE VVPGIYLIRV LGLEESTGSR GLQ--GRSSP ENSP00000262139/1-446 VHGSNEIPDV YIVERLFSSS LVVVVSHTKP RQMNVYHFKK GTEICNYSYS ENSBTAP00000050288/1-439 VHGSNDTPDV YIVERLFSSS LVVVVSHTKP RQMNVYHFKK GTEICNYSYS BACU019970/1-367 ---------V CIVERLFSSS LVVVVSRTKP RQMNVYHFKK GTEICSYGYS ENSTTRP00000011948/1-387 ---------V CIVER-FSSS LVVVVSHAKP RQMNVYHFKK GTEICSYSYS 101 150 bmy_14590T0/1-375 RQQVALWSCR VRMPFPGVDA GFSRAV---- ---------C SPPGLCALSI ENSP00000262139/1-446 SNILSIRLNR QRLLVCLEES IYIHNIKDMK LLKTLLDIPA NPTGLCALSI ENSBTAP00000050288/1-439 GNILAIRLNR QRLLVCLEES IYIHNIKDMK LLKTILDIPA NPTGLCALSI BACU019970/1-367 SNVLSVRLNR QRLLVCLEES IYIHNIKDMK LLKTILDIPP NPTGLCALSI ENSTTRP00000011948/1-387 SNVLSIRLNR QRLLVCLEES IYIHNIKDMK LLKTILDIPP NPTGLCALSI 151 200 bmy_14590T0/1-375 NHSNSYVAYP GSRTTGEIVL YDGHAL---- ---------- ---------- ENSP00000262139/1-446 NHSNSYLAYP GSLTSGEIVL YDGNSLKTVC TIAAHEGTLA AITFNASGSK ENSBTAP00000050288/1-439 NHSNSYVAYP GSLTTGEIVL YDGHSLKPVC TIAAHEGTLA AIAFNSSGSR BACU019970/1-367 NHSNSYVAYP GSRTTGEIVL YDGHALKTVC TIAAHEGALA AIAFNASGSR ENSTTRP00000011948/1-387 NHSNSYVAYP GSRTTGEIVL YDGHALKTVC TVAAHEGALA AIAFNASGSR 201 250 bmy_14590T0/1-375 -------GTV IRVFSVPDGQ KLYEFRRGMK RYVTISSLAF SMDSQLLCAS ENSP00000262139/1-446 LASASEKGTV IRVFSVPDGQ KLYEFRRGMK RYVTISSLVF SMDSQFLCAS ENSBTAP00000050288/1-439 LASASEKGTV IRVFSVPDGQ KLYEFRRGMK RYVTISSLAF SMDSQFLCAS BACU019970/1-367 LASASEKGTV IRVFSVPDGQ KLYEFRRGMK RYVTISSLAF SMDSQLLCAS ENSTTRP00000011948/1-387 LASASEKGTV IRVFSVPDGQ KLYEFRRGMK RYVTISSLAF SMDSQLLCAS 251 300 bmy_14590T0/1-375 SNTETVHIFK LEHPANSQPE EPSTWTSYVG KMFMAATNYL PTQVSDMMNQ ENSP00000262139/1-446 SNTETVHIFK LEQVTNSRPE EPSTWSGYMG KMFMAATNYL PTQVSDMMHQ ENSBTAP00000050288/1-439 SNTETVHIFK LEHLANSRPE EPSTWTGYMG KMFLAASSYL PTQVSDMMNQ BACU019970/1-367 SNTETVHIFK LEHLANSQPE EPSTWTSYVG KMFMAATNYL PTQVSDMMNQ ENSTTRP00000011948/1-387 SNTETVHIFK LEHLANSQPE EPSTWTSYMG KMLMAATNYL PTQVSDMMNQ 301 350 bmy_14590T0/1-375 DRAFATGRLG FSGHRNICTL ST-IQKLPRL LVASSSGHLY IYNLDPQDGG ENSP00000262139/1-446 DRAFATARLN FSGQRNICTL ST-IQKLPRL LVASSSGHLY MYNLDPQDGG ENSBTAP00000050288/1-439 DRAFATGRLG FSGHRNICTL AT-IQKLPRL LVVSSSGHLY VYNLDPQDGG BACU019970/1-367 DRAFATGRLG FSGHRNICTL STYVQRHP-- ----SSGTNH YRFASPKHRF ENSTTRP00000011948/1-387 DRAFATGRLG FSGHRNICTL ST-XXXXXXX XXXXXXXXXX XXXXXXXXXX 351 400 bmy_14590T0/1-375 DCVLIKTHSL LGSGTADENK ENDLRPSLPQ SYAATVARPS PSAASTVPGY ENSP00000262139/1-446 ECVLIKTHSL LGSGTTEENK ENDLRPSLPQ SYAATVARPS ASSASTVPGY ENSBTAP00000050288/1-439 DCVLIKTHSL LGSGTSEENK ENDLRPPLPQ SYAATVARPS ASAASTVPGY BACU019970/1-367 TCPR-HTHSL LGSGTADENK ENDLRPSLPQ SYAATVARSS PSAASTVPGY ENSTTRP00000011948/1-387 XXXXXXXXXL LGSGTADENK ENDLRASLPQ SYAATVARPS PSAASTVPGY 401 450 bmy_14590T0/1-375 SEDGGALRGE VIPEHEFATG PVCLDDENEF PPVSIGNP-- -------- ENSP00000262139/1-446 SEDGGALRGE VIPEHEFATG PVCLDDENEF PPIILCRGNQ KGKTKQS- ENSBTAP00000050288/1-439 SEDGGALRGE VIPEHEFATG PVCLDDENEF PPITSCRGDQ QDKATPS- BACU019970/1-367 SEDGGALRGE VIPEHEFAAG PVCLDDENEF PPV------- -------- ENSTTRP00000011948/1-387 SEDGGALRGE VIPEHEFATG PVCLDDENEF PPIILCRGDQ KGKTKQSW