KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:12 2014 Check: 00 .. Name: ENSP00000308275/1-380 Len: 413 Check: 6528 Weight: 1.00 Name: BACU011528/1-396 Len: 413 Check: 9459 Weight: 1.00 Name: ENSBTAP00000050302/1-380 Len: 413 Check: 6192 Weight: 1.00 Name: bmy_13799T0/1-395 Len: 413 Check: 1806 Weight: 1.00 Name: ENSTTRP00000015061/1-346 Len: 413 Check: 7043 Weight: 1.00 // 1 50 ENSP00000308275/1-380 MAAPWWRAAL CECRRWRGFS TSAVLGRRTP PLGPMPNSDI DLSNLERLEK BACU011528/1-396 MAATWWRVAL YGSRRWRGFS TSAALSRRTA PLGPMPNEVI DVSNLERLKK ENSBTAP00000050302/1-380 MAAPWWRVVL NGSRNWRGFS TSAALSRRAA PLGPMPNEDI DVSNLERLKK bmy_13799T0/1-395 MAATWWRVAL YGSRRWRGFS TSAALSRRTA PLGPMPNEVI DVSNLERLKK ENSTTRP00000015061/1-346 ---------- ---------- ---------- ----MPNEVI DVSNLERLKK 51 100 ENSP00000308275/1-380 YRSFDRYRRR AEQEAQAP-- HWWRTYR--- ---------- -EYFGEKTDP BACU011528/1-396 DPSLDRLGHA VSLLFSLPPS QFMSSLRMGI LPVLTTIGSL HPHSAWHVDP ENSBTAP00000050302/1-380 YRSFDRYRRR AEREARDP-- HWWRTYR--- ---------- -EHFGEESDP bmy_13799T0/1-395 YRSFDRYRRR AEQEARDP-- HWWRTYR--- ---------- -EHFGEKSDP ENSTTRP00000015061/1-346 YRSFDRYRRR AEQEARDP-- HWWRTYR--- ---------- -EHFGEESDP 101 150 ENSP00000308275/1-380 KEKIDIGLPP PKVSRTQQLL ERKQAIQELR ANVEEERAAR LRTASVPLDA BACU011528/1-396 KDKIDIGLPP PKVCRTQQLL ERKRVLRALR ANVEEERAAR LRTARIPLEA ENSBTAP00000050302/1-380 KDTVDIGLPP PKVCRTQQLL ERKRVLRELR TSVEEERASR LRTASIPLEA bmy_13799T0/1-395 KDKIDIGLPP PKVCRTQQLL ERKRVLRALR ANVEEERAAR LRTARIPLEA ENSTTRP00000015061/1-346 KDKIDIGLPA PKVCRTQQLL ERKRVLQALR ANVEEERAAR LRTARIPLEA 151 200 ENSP00000308275/1-380 VRAEWERTCG PYHKQRLAEY YGLYRDLFHG ATFVPRVPLH VAYAVGEDDL BACU011528/1-396 VRAEWERTCG PYHKQRLAEH YGLYRDLFHG ATFVPRVPLH VAYAVGEDDL ENSBTAP00000050302/1-380 VRAEWERTCG PYHKQRLAEY YGLYRDLFHG ATFVPRVPLH VAYAIGEDDL bmy_13799T0/1-395 VRAEWERTCG PYHKQRLAEH YGLYRDLFHG ATFVPRVPLR VAYAVGEDDL ENSTTRP00000015061/1-346 VRAEWERTCG PYHKQRLAEH YGLYRDLFHG ATFVPRVPLH VAYAIGEDDL 201 250 ENSP00000308275/1-380 MPVYCGNEVT PTEAAQAPEV TYEAEEGSLW TLLLTSL--- ------DGHL BACU011528/1-396 MPVYYGNEVT PTEAAQAPEV TFEADEGSMW TLLLTNL--- ------DGHL ENSBTAP00000050302/1-380 VPVYYGNEVT PTEAAQPPEV TYEADEGSMW TLLLTNL--- ------DGHL bmy_13799T0/1-395 LPVYYGNEVT PTEAAQAPEV TYEADEGSMW TLLLTNLGIS TSREHTGGDV ENSTTRP00000015061/1-346 VPVYYGNEVT PTEAAQAPEV TYKAGEGSMW TLLLTNL--- ------DGHL 251 300 ENSP00000308275/1-380 LEPDAEYLHW LL-------- TNIPGNRVAE GQVTCPYLPP FPARGSGIHR BACU011528/1-396 LEPDAEYLHW LV-------- TNIPGHRVAE GQETCPYLPP FPARGSGFHR ENSBTAP00000050302/1-380 LEPDAEYVHW LV-------- TNIPGSRVAE GEETCPYLPP FPARGSGFHR bmy_13799T0/1-395 --PAAISREW QLTDAFRPTR TNIPGNRVAE GQETCPYLPP FPARGSGFHR ENSTTRP00000015061/1-346 LEPDAEYLHW LV-------- TNIPGNRVAE GQETCPYLPP FPARGSGFHR 301 350 ENSP00000308275/1-380 LAFLLFKQDQ PIDFSEDARP SPCYQLAQRT FRTFDFYKKH QETMTPAGLS BACU011528/1-396 FAFLLFKQDK PIDFSGDTRP SPCYQLAQRT FHTFDFYKKH QDAMTPAGLA ENSBTAP00000050302/1-380 FAFLLFKQDK PVDFSGDTRP SPCYQLAQRT FHTFDFYKKH QDAMTPAGLA bmy_13799T0/1-395 FAFLLFKQDK PIDFSEDTRP SPCYQLAQRT FHTFDFYKKH QDAMTPAGLA ENSTTRP00000015061/1-346 FAFLLFKQDK PIDFSGDTRP SPCYQLAQRT FHTFDFYKKH QDAMTPAGLA 351 400 ENSP00000308275/1-380 FFQCRWDDSV TYIFHQLLDM REPVFEFVRP PPYHPKQKRF PHRQPLRYLD BACU011528/1-396 FFQCRWDDSV THIFHQLLDM REPVFEFVRP PPYHPKQKRF PHRQPLRYLD ENSBTAP00000050302/1-380 FFQCRWDDSV THIFHQLLDM REPVFEFVRP PPYHPKQKCF PHRQPLRYLD bmy_13799T0/1-395 FFQCRWDDSV THIFHQLLDM REPVFEFVRP PPYHPKQKRF PHRQPLRYLD ENSTTRP00000015061/1-346 FFQCRWDDSV THIFHQLLDM REPVFEFMRP PPYHPKQKRF PHRQPLRYLD 401 450 ENSP00000308275/1-380 RYRDSHEPTY GIY BACU011528/1-396 RYRDSHEPTY GIY ENSBTAP00000050302/1-380 RYRDSHEPTY GFY bmy_13799T0/1-395 RYRDSHEPTY GIY ENSTTRP00000015061/1-346 RYRDSHEPTY GIY