KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:13 2014 Check: 00 .. Name: bmy_10371T0/1-161 Len: 353 Check: 7049 Weight: 1.00 Name: ENSP00000261880/1-315 Len: 353 Check: 3167 Weight: 1.00 Name: ENSBTAP00000050312/1-315 Len: 353 Check: 3123 Weight: 1.00 Name: BACU018699/1-290 Len: 353 Check: 4688 Weight: 1.00 Name: ENSTTRP00000002847/1-315 Len: 353 Check: 1499 Weight: 1.00 // 1 50 bmy_10371T0/1-161 ---------- ---------- ---------- --------MQ HHELYSWS-- ENSP00000261880/1-315 MAAGVPCALV TSCSSVFSGD QLVQHILGTE DLIVEVTSND AVRFYPWTID ENSBTAP00000050312/1-315 MAAGVPCALV TSCSSTFSAD RLVQHILGTE DVVVEVTAND AVRFYPWTID BACU018699/1-290 ---------- ---------- -----ILGTE DLIVEVTAND AVRFYPWTID ENSTTRP00000002847/1-315 MAAGVPCALV TSCSSTFSAD RLVQHILGTE DLIVEVTAND AVRFYPWTID 51 100 bmy_10371T0/1-161 ---------- ---------- ---------- --------PV GTHSVVTFIK ENSP00000261880/1-315 NKYYSADINL CVVPNKFLVT AEIAESVQAF VVYFDSTQKS GLDSVSSWLP ENSBTAP00000050312/1-315 NKYYSADINL CVVPNKFLVT AEIAESVQAF VVYFDSTQKS GLDSVSSWLP BACU018699/1-290 NKYYSADINL CVVPNKFLIT AEIAESVQAF VVYFDSTQKS GLDSVSSWLP ENSTTRP00000002847/1-315 NKYYSADINL CVVPNKFLVT AEIAESVQAF VVYFDSTQKS GLDSVSSWLP 101 150 bmy_10371T0/1-161 ---------- ---------- --ARLIAFGF CVFSTY---- ---------- ENSP00000261880/1-315 LAKAWLPEVM ILVCDRVSED GINRQKAQEW CIKHGFELVE LSPEELPEED ENSBTAP00000050312/1-315 LAESWLPEVM ILVCDRVSEN GVNRQKAQEW CIKHGFELVE LSPEELPEED BACU018699/1-290 LAEAWLPEVM ILVCDRVSEN GVNRQKAQEW CIKHGFELVE LSPEELPEED ENSTTRP00000002847/1-315 LAEAWLPEVM ILVCDRVSEN GVNRQKAQEW CIKHGFELVE LSPEELPEED 151 200 bmy_10371T0/1-161 --------IN HV-------- WRIL------ ---------- ---------- ENSP00000261880/1-315 DDFPESTGVK RIVQALNANV WSNVVMKNDR NQGFSLLNSL TGTNHSIGSA ENSBTAP00000050312/1-315 DDFPESTGVK RIVQALNANV WSNVVMKNER NQGLNLLSSL TGASHSIGSA BACU018699/1-290 DDFPESTGVK RIVQALNANV WSNVVMKNDR NQGFNLLSSL AGANHSTGSA ENSTTRP00000002847/1-315 DDFPESTGVK RIVQALNANV WSNVVMKNDR NQGFNLLSSL AGANHSTGSA 201 250 bmy_10371T0/1-161 ---------- ---------- ---------- ------ISDP TLDLDIQELA ENSP00000261880/1-315 DPCHPEQPHL PAADSTESLS DHRGGASNTT DAQVDSIVDP MLDLDIQELA ENSBTAP00000050312/1-315 ESCHSEQPCV PAAERTESLL DHRGAASNTA DVQVDSIVDP MLDLDIQELA BACU018699/1-290 ETCHSEQPQL PAAERTEPLL DNRGGASNTT DTQVDSIMDP TLDLDIQELA ENSTTRP00000002847/1-315 ETCHSEQPQL PAAERTEPLL DHRGGASNTT DTQVDSIADP TLDLDIQELA 251 300 bmy_10371T0/1-161 SLTTGGGDLE NFERLFSKLK EMKACLINME SCYNIHAFQI VLRLLDEFLK ENSP00000261880/1-315 SLTTGGGDVE NFERLFSKLK EMKD------ ---------- ---------- ENSBTAP00000050312/1-315 SLTTGGGDLE NFERLFSKLK EMKD------ ---------- ---------- BACU018699/1-290 SLTTGGGDLE NFERLFSKLK EMKD------ ---------- ---------- ENSTTRP00000002847/1-315 SLTTGGGDLE NFERLFSKLK EMKD------ ---------- ---------- 301 350 bmy_10371T0/1-161 IYFPPRQGCD ASSRAKKVAC RKGEKISQVA KAFWMAIGGD RDEIEGLSSD ENSP00000261880/1-315 ------KAAT LPHEQRKVHA EK------VA KAFWMAIGGD RDEIEGLSSD ENSBTAP00000050312/1-315 ------KAAT LPHEQRKMHA EK------VA KAFWMAIGGD RDEIEGLSSD BACU018699/1-290 ------KAAT LPHEQRKLHA EK------VA KAFWMAIGGD RDEIEGLSSD ENSTTRP00000002847/1-315 ------KAAT LPHEQRKLHA EK------VA KAFWMAIGGD RDEIEGLSSD 351 400 bmy_10371T0/1-161 EEH ENSP00000261880/1-315 EEH ENSBTAP00000050312/1-315 EEH BACU018699/1-290 EEH ENSTTRP00000002847/1-315 EEH