KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:14 2014 Check: 00 .. Name: ENSTTRP00000009362/1-494 Len: 513 Check: 8810 Weight: 1.00 Name: ENSBTAP00000050384/1-490 Len: 513 Check: 5476 Weight: 1.00 Name: bmy_11415T0/1-291 Len: 513 Check: 9320 Weight: 1.00 Name: BACU012438/1-491 Len: 513 Check: 96 Weight: 1.00 // 1 50 ENSTTRP00000009362/1-494 ----MATEAR SEGEVPAGES GRRDAICNFV ICNDSSLRSQ PIIFNPDFFV ENSBTAP00000050384/1-490 ---------- ---------- ---EAICNFV ICNDSSLQSQ PIIFNPDFFV bmy_11415T0/1-291 ---------- ---------- --SDAICNFV ICNDSSLRSQ PIIFNPDFFV BACU012438/1-491 MVWKGEEQEK RQKFKKENVK KRGDAICNFV ICNDSSLRSQ PIIFNPDFFV 51 100 ENSTTRP00000009362/1-494 EKLRHEKPEV FTELVVSNIT RLIDLPGTEL AQLMGEVDLK LPGGAGPASG ENSBTAP00000050384/1-490 EKLRHEKPEV FTELVVSNIT RLIDLPGTEL AQLMGEEDLK LPGGAGPASG bmy_11415T0/1-291 EKLRHEKPEV FTELVVSNIT RLIDLPGTEL AQLMGEVDLK LPGGAGPASG BACU012438/1-491 EKLRHEKPEV FTELVVSNIT RLIDLPGTEL AQLMGEVDLK LPGGAGPASG 101 150 ENSTTRP00000009362/1-494 FFRSLMSLKR KEKGVIFGSP LTEEGIARIY QLIEYLHKXX XXXXXXXXXX ENSBTAP00000050384/1-490 FFRSLMSLKR KEKGVVFGSP LTEEGIAQIY QLIEYLHKNL RVEGLFRVPG bmy_11415T0/1-291 FFRSLMSLKR KDKGVIFGSP LTEEGIAQIY QLIEYLHKNL RVEGLFRVPG BACU012438/1-491 FFRSLMSLKR KEKGVIFGSP LTEEGIAQIY QLIEYLHKNL RVEGLFRVPG 151 200 ENSTTRP00000009362/1-494 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000050384/1-490 NSVRQQILRD ALNNGTDIDL ESGEFHSNDV ATLLKMFLGE LPEPLLTHKH bmy_11415T0/1-291 NSVRQQILRD ALNNGTDIDL ESGEFHSNDV ATLLKMFLGE LPEPLLTHKH BACU012438/1-491 NSVRQQILRD ALNNGTDIDL ESGEFHSNDV ATLLKMFLGE LPEPLLTHKH 201 250 ENSTTRP00000009362/1-494 XXXXXXXXXL MQFDDKGNKT NVPDKERQIE ALQLLFLILP PPNRNLLKLL ENSBTAP00000050384/1-490 FHAHLKIADL MQFDDKGNKT SVPDKERQIE ALQLLFLILP PPNRNLLKLL bmy_11415T0/1-291 FHAHLKIADL MQFDDKGNKT BVPDKERQIE ALQLLFLILP PPNRNLLKLL BACU012438/1-491 FHAHLKIADL MQFDDKGNKT NVPDKERQIE ALQLLFLILP PPNRNLLKLL 251 300 ENSTTRP00000009362/1-494 LDLLYQTAKK QDKNKMSAYN LALMFAPHVL WPKNVTANDL QENITKLNNG ENSBTAP00000050384/1-490 LDLLYQTAKK QDKNKMSAYN LALMFAPHVL WPKNATANDL QENITKLNDG bmy_11415T0/1-291 LDLLYQTAKK QDKNKMSAYN LALMFAPHVL WPKNVTANDL QENITKLNNG BACU012438/1-491 LDLLYQTAKK QDKNKMSAYN LALMFAPHVL WPKNVTANDL QENITKLNNG 301 350 ENSTTRP00000009362/1-494 MTFMIKHSQK LFKAPAYIRE CARLNYLGSR TQASKDDLDL IASCHTSSFQ ENSBTAP00000050384/1-490 MAFMIKHSQK LFKAPAYIRE CARLHYLGSR TQASKDDLDL IASCQTRSFQ bmy_11415T0/1-291 MTFMIKHSQK LFK------- ---------- ---------- ---------- BACU012438/1-491 MTFMIKHSQK LFKAPAYIRE CARLHYLGSR TQASKDDLDL IASCHTSSFQ 351 400 ENSTTRP00000009362/1-494 VTRSQKWNQR DSCLHQEETQ QRTGEALREL FQHVHNMPES AKKKQLIRQF ENSBTAP00000050384/1-490 LAKSQKWNRV DSCSHQEETQ QRTEEALREL FQHVHNMPES AKKKQLIRQF bmy_11415T0/1-291 ---------- ---------- ---------- ---------- ---------- BACU012438/1-491 VTRFQKWNRR DSCLHQEETQ QRTGEALREL FQHVHNMPES AKKKHLIRQF 401 450 ENSTTRP00000009362/1-494 NKHSETQTPG REPSTLRVQK RARSRSFSGL IKXXXXXNQM MSEKKNKYPT ENSBTAP00000050384/1-490 NKHSGTQTPG REPSTPPVRK RARSRSFSGL IKRKVLGNQM MSEKKNKYPT bmy_11415T0/1-291 ---------- ---------- ---------- ---------- ---------- BACU012438/1-491 NKHSETQTPG REPSTLRVQK RARSRSFSGL IKRKVLGNQM MSEKKNKYPT 451 500 ENSTTRP00000009362/1-494 PESVAIDELK RASKENINLL FSGSPAVMMT PTRLKWSEGK KEGKKGFL-- ENSBTAP00000050384/1-490 PDSVAIGELK RASKENMNLL FSGSPAVMMT PTRLKWPEGK KEGKKVLVKQ bmy_11415T0/1-291 ---------- ---------- ---------- ---------- ---------- BACU012438/1-491 PESVAIDELK RTSKENMNLV FIDSFNKHFE FKKEIASHKQ K--------- 501 550 ENSTTRP00000009362/1-494 ---------- --- ENSBTAP00000050384/1-490 IKSKCKLTCE TKY bmy_11415T0/1-291 ---------- --- BACU012438/1-491 ---------- ---