KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:16 2014 Check: 00 .. Name: bmy_00640T0/1-232 Len: 317 Check: 4912 Weight: 1.00 Name: ENSP00000249776/1-316 Len: 317 Check: 7673 Weight: 1.00 Name: ENSTTRP00000010027/1-315 Len: 317 Check: 5627 Weight: 1.00 Name: ENSBTAP00000050471/1-313 Len: 317 Check: 9852 Weight: 1.00 // 1 50 bmy_00640T0/1-232 MAAPEGVAHG SAFRTTWPPT ESTSHPALPA TGSFRLKPRR ---------- ENSP00000249776/1-316 MAAPEAPPLD RVFRTTWLST ECDSHPLPPS YRKFLFETQA ADLAGGTTVA ENSTTRP00000010027/1-315 MAAPEGVAHG RAFRTTWPPT ESASQ-LPPG HRKFPFETRA ADPVCDTAVI ENSBTAP00000050471/1-313 MAAAEDVAHA SDCRTTWPPT ESAPHLLPPG RRKFPFETQA ADAVGGTAVI 51 100 bmy_00640T0/1-232 ---------- ---QTRSA-- -----MHKLE PLLRAYYLLG PK-------- ENSP00000249776/1-316 AGNLLNESEK DCGQDRRAPG VQPCRLVTMT SVVKTVYSLQ PPSALSGGQP ENSTTRP00000010027/1-315 AEHLSNQSDE ACGQEQQASG PQPCRLVTMT SVVKTVYTLQ PPSVLSSGLS ENSBTAP00000050471/1-313 AEHLLNQSDE ACGQEQQAPG PQPCRLVTMT SVVKTVYTLQ PSCVLSSGLP 101 150 bmy_00640T0/1-232 ---------K SMFP------ DLTQE----- ----IQKMML QKSSN----- ENSP00000249776/1-316 ADTQTRATSK SLLPVRSKEV DVSKQLHSGG PENDVTKITK LRRENGQMKA ENSTTRP00000010027/1-315 ADAQARATSK SLLPVRSKEV DVSRP-HLGD SENDVTKIIK PRRDNGQLRA ENSBTAP00000050471/1-313 ADAQTRATFK SQLPVKSKEV DVSRP-HSGA SENDVTKIIK PRRENGQVKA 151 200 bmy_00640T0/1-232 ---------- ------QDET MEEELKDKNQ LLEAVNKQLH QKLIETQGEL ENSP00000249776/1-316 TDTATRRNVR KGYKPLSKQK SEEELKDKNQ LLEAVNKQLH QKLTETQGEL ENSTTRP00000010027/1-315 TDTATRRNIR KSYKPLSKEK SEEELKDKNQ LLEAVNKQLH QKLIETQGEL ENSBTAP00000050471/1-313 TDT-SRRNLR KSYKPLSKQK SEEELKDKNQ LLEAVNKQLH QKLIETQGEL 201 250 bmy_00640T0/1-232 KDLTQKVELL EKFQDNCLAI LESKGLNP-- GSETLASQQD STTDHMDSML ENSP00000249776/1-316 KDLTQKVELL EKFRDNCLAI LESKGLDPAL GSETLASRQE STTDHMDSML ENSTTRP00000010027/1-315 KDLTQKVELL EKFQDSCLAI LESKGLNPVL GSETLAARQD STTDHMDSML ENSBTAP00000050471/1-313 KDLTQKVELL EKFQDNCLAI LESKGLNP-- GSETLASQQD STADHVDSML 251 300 bmy_00640T0/1-232 LLETLQDDLR LFNETAKKQM EELQALKVKL KIKEEERAQF LEQQTLCNSQ ENSP00000249776/1-316 LLETLQEELK LFNETAKKQM EELQALKVKL EMK-EERVRF LEQQTLCNNQ ENSTTRP00000010027/1-315 LLETLQDELK LFNETAKKQM EELQALKVTL KIKEEERAQF LEQQTLCNSQ ENSBTAP00000050471/1-313 LLQTLQDELK LFNETAKKQM KELQALKVKL KMKEEERAQF LEQQTLCSNQ 301 350 bmy_00640T0/1-232 VNDFTTALEE MEQLLEM ENSP00000249776/1-316 VNDLTTALKE MEQLLEM ENSTTRP00000010027/1-315 VNDFTTALEE MEQLLEM ENSBTAP00000050471/1-313 VNDFTTALEE MEQLLEI