KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:19 2014 Check: 00 .. Name: ENSP00000334879/1-793 Len: 806 Check: 2460 Weight: 1.00 Name: ENSBTAP00000050514/1-777 Len: 806 Check: 8575 Weight: 1.00 Name: bmy_19246T0/1-787 Len: 806 Check: 8028 Weight: 1.00 Name: ENSTTRP00000014061/1-786 Len: 806 Check: 8797 Weight: 1.00 // 1 50 ENSP00000334879/1-793 MARELSQEAL LDFLCQAGGR VTNAALLSHF KSFLRDPDAS PSQHQHRREL ENSBTAP00000050514/1-777 MARELSQEAL LDFLCQAGGR VTNAALLSHF KSFLRDPDAP PSQQQRRREL bmy_19246T0/1-787 MARELSQEAL LDFLCQAGGR VTNGALLSHF KSFLRDPDTP PSQHQRRREL ENSTTRP00000014061/1-786 MARELSQEAL LDFLCQAGGR VTNAALLSHF KSFLRDPDTP PSQHQRRREL 51 100 ENSP00000334879/1-793 FKGFVNSVAA VRQDPDGTKY VVLKRRYRDL LG-EEGLQRP REPPAAAPSA ENSBTAP00000050514/1-777 FKGYVNSVAA VRQDPDGTKY VVLKRRYRDL VGEEEGLRRP RDPPAGAAPA bmy_19246T0/1-787 FKGFVNSVAA VRQDPDGTKY VVLKKRYRDL LG-EEGLQRP SDPPAAAAPA ENSTTRP00000014061/1-786 FKGFVNSVAA VRQDPDGTKY VVLKRRYRDL LG-EEGLQRP RDPPAAAAPA 101 150 ENSP00000334879/1-793 GGAAPCSPRG ARRGE-PPQQ QPRRRRREKE PEEEPAGAAA RAADAACNGL ENSBTAP00000050514/1-777 GGAAPGSPLP ARRGEHPPQP QPGRRIRR-- -EEAPAGAAA PVADAGCNGL bmy_19246T0/1-787 GGAAPSFPLL ARRGEPPPQQ QPRRRRREKE LEEEPAGAAD PAAEAGCDGL ENSTTRP00000014061/1-786 GGAAPSFPLL ARSGEPPPQQ -PRRRRREKE LEEEQAGAAG PAAEAGCNGL 151 200 ENSP00000334879/1-793 PGSDSRRAPG KGGGSKGSPG QRPPVPAAA- AAGAQARASC AAAKTQGRCC ENSBTAP00000050514/1-777 PAGGAREAAR GGGRPRGRSG HRAPVPAAAV AAAAQDRARC AAAETQGRCC bmy_19246T0/1-787 LASGAR---- RGGRRRGSSG HRAPVPAAA- ----QDGARC AAAETQGRCC ENSTTRP00000014061/1-786 PASGAREAAR RGGRRRGSSG HRAPVPAAA- ----QDGARC VAAETQGRRC 201 250 ENSP00000334879/1-793 WECLQNNLAV LPGE--LGAL PH----SATA EEKPARALPA QDDRGASRER ENSBTAP00000050514/1-777 WECLQNGLGG ---------L PDPATASASA AEK-----LA QDDRGAPRPQ bmy_19246T0/1-787 WECLQNGLGG LPGEPLLGSL PNPPTATASA WEKPAPAPPA QDDRGAPRPQ ENSTTRP00000014061/1-786 WECLQNGLGG LPGESLLRSL PD----SASA WEKPAPAPPA QDDSGAPRPQ 251 300 ENSP00000334879/1-793 EEGALAEPAP VPAVAHSPPA TVEAATSRAS PPALLPGPAP RGDRPELLTP ENSBTAP00000050514/1-777 WEGVLAEPPP GPATPRSPPA TVEA----AA PPAVLSSPSP AGDPPAPVTP bmy_19246T0/1-787 REGAPAEPPP VSAAPRSPPT TVEAAGSGAS PPALLSCPTP PGEPPELVTP ENSTTRP00000014061/1-786 REGAPAEPPP VCAAPRSPPT TVEAAGSGAS PPALLSCPTP PGEPPELVIS 301 350 ENSP00000334879/1-793 SSLHYSTLQQ QQQRTREWVA RHPQVPEARD QGPIRAWSVL PDNFLQLPLE ENSBTAP00000050514/1-777 GSVHYSTLQQ QQQRTREWVA RHPQVPETRD HGPVRAWSVL PDDFPRLPSE bmy_19246T0/1-787 SSLHYSTLKQ QQQRTREWVA RHPQIPKARD HGPIRAWSML PDNFPQLPSE ENSTTRP00000014061/1-786 GSLHYSTLQK HQQRTREWVA RHPQIPEARN QGPIRAWSML PDNFLQLPSD 351 400 ENSP00000334879/1-793 PGSTEPNSE- -PPDPCLSSH SL-FPVVPDE SWESWAGNPS LTVFRSIRCQ ENSBTAP00000050514/1-777 QGSWVQESES APAEPPPPSQ SLVFPTVS-- --EVWPGDSQ LAVFRSIRCQ bmy_19246T0/1-787 PGFWVPESKP APPDLPPPPH SL-FPAVS-- --ESCPGKSP LAVFRSIRCQ ENSTTRP00000014061/1-786 PGFWVPVSKP APPDLPPPPH SL-FPAVS-- --ESWLGESP LAVFRSIRCQ 401 450 ENSP00000334879/1-793 LSLQDLDDFV DQESDGSEES SSGPKDSPGA SEEGLQVVLG TPDRGKLRNP ENSBTAP00000050514/1-777 LSLQDLEDFV EQESHGSEES SSGPKESPGG SEDGLRLALG APDGRRLRNP bmy_19246T0/1-787 LSLQDLEDFV DQESHGSEES SSGPKESPGG SEEGLXLAPG GPDGRRLRNP ENSTTRP00000014061/1-786 LSLQDLEDFV DQESHGSEES SSGPKESPGG SEEGLHLAPG APDGRRLRNP 451 500 ENSP00000334879/1-793 AGGLSVSRKE GSPSRSPQGL RNRGDGHISQ QVPAGANGLA GHPLKPLPWP ENSBTAP00000050514/1-777 AG--AP-PKE ARPTRSPQGL RNVGDAHTSQ PVSTGADGPA GDP-QPLSWP bmy_19246T0/1-787 AG--APSPKE GSPSRSLQGL RNREDGHPSQ PIPIGAGGLA GHP-QPLPWP ENSTTRP00000014061/1-786 AG--APSPKE GCPSGSLQGL RNIEDGHPSQ PVPIGAGGLA GHP-QPLPWP 501 550 ENSP00000334879/1-793 VPKLRRSLRR SSLAGRAKLS SSDEEYLDEG LLKRSRRPPR SRKPSKAGTA ENSBTAP00000050514/1-777 APKLRRSLRR NSRAGRAKLS SSDEECLQED LLKRSRRPPR SRKPSRVGAM bmy_19246T0/1-787 VPKLRRSLRR SSRAERAQLS SSDEECLEGD LLKRSRRPPR SRRPSKVGAM ENSTTRP00000014061/1-786 VPKLRRSLRW SSRAERAKLS SSDEECLEED LLKRSRRPPR SRKPSKVGAM 551 600 ENSP00000334879/1-793 PSPRVDAGLS LKLAEVK-AV VAERGWRHSL WVPSGEGSAA LAPHRTSEHK ENSBTAP00000050514/1-777 SSPRVDAALT LAHADIKAAA AAERNHPHSW QVPGGDRLAA LVPHRSSEHK bmy_19246T0/1-787 CSPRVDAALT PKPVDLK-AT VVECGHPHSS WAPGEERPAA LIPTRSSEHK ENSTTRP00000014061/1-786 SSPRVDAALT PKPADIK-AT VVECGHPHSS WAPGGERPAA LIPPRSSEHK 601 650 ENSP00000334879/1-793 SSLVPLDARE HEWIVKLASG SWIQVWTLFW EDPQLALHKD FLTGYTALHW ENSBTAP00000050514/1-777 SSLVPLDARE HEWIVKLASG SWIRVLSLFW EDPQLALHKD FLTGYTALHW bmy_19246T0/1-787 SSLVPLDARE HEWIVKLASG SWIQVLTLFW EDPQLALHKD FLTGYTALHW ENSTTRP00000014061/1-786 SSLVPLDARE HEWIVKLASG SWIQVLTLFW EDPQLALHKD FLTGYTALHW 651 700 ENSP00000334879/1-793 IAKHGDLRAL QDLVSGAKKA GIVLDVNVRS SCGYTPLHLA AIHGHQGVIK ENSBTAP00000050514/1-777 IAKHGALRAL QDLASSAQKA GVALDVNVKS SCGYTPLHLA AIHGHQGIIK bmy_19246T0/1-787 IAKHGDLRAL QELVSGAQKA GIALDINVKS SCGYTPLHLA AIHGHQGIIK ENSTTRP00000014061/1-786 IAKHGDLRVL QDLVSGAQKA GIALDVNVKS SCGYTPLHLA AIHGHQGIIK 701 750 ENSP00000334879/1-793 LLVQRLASRV NVRDSSGKKP WQYLTSNTSG EIWQLLGAPR GKPIFPVYPL ENSBTAP00000050514/1-777 LLVQRLASRV NIRDSSGKKP WQYLTSNTSG EIWQLLEAPR GKPIFPTYSL bmy_19246T0/1-787 LLVQRLASRV NVRDSSGKKP WQYLTSNTSG EIWQLLEAPR GKPIFSTYPL ENSTTRP00000014061/1-786 LLVQRLASRV NVRDSSGKKP WQYLTSNTSG EIWQLLEAPR GKPIFSTYPL 751 800 ENSP00000334879/1-793 VGSSSPTRKA KSKEISRSVT RKTSFAALLK SQHNKWKLAN QYEKFHSPRE ENSBTAP00000050514/1-777 VRSSSPTRKV KSQEVSRHVT RKTSLAALLK SQHTKWKLAN QYEKCPNLRE bmy_19246T0/1-787 VRSSSPTRKA KSREISRNVT RKTSFAALLK CQHSKWRSAN QYEKFPSLRE ENSTTRP00000014061/1-786 VRSSSPTRKA KSREISRNVT RKTSFAALLK SQHSKWKSAN QYEKFPSLRE 801 850 ENSP00000334879/1-793 REEYSD ENSBTAP00000050514/1-777 REEDSA bmy_19246T0/1-787 REEYSD ENSTTRP00000014061/1-786 REEYSD