KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:20 2014 Check: 00 .. Name: ENSBTAP00000050552/1-499 Len: 523 Check: 7464 Weight: 1.00 Name: ENSTTRP00000000995/1-522 Len: 523 Check: 6535 Weight: 1.00 Name: bmy_15458T0/1-523 Len: 523 Check: 5631 Weight: 1.00 Name: BACU014808/1-523 Len: 523 Check: 5570 Weight: 1.00 // 1 50 ENSBTAP00000050552/1-499 -MVRSGKNGD LHLKQIAYYK RTGEYHPTTL PSERSGIRRA AKKFVFK--- ENSTTRP00000000995/1-522 -MVRSGKNGD LHLKQIAYYK RIGEYHPTTL PSERSGIRRA AKKFAFKEKK bmy_15458T0/1-523 MMVRSGKNGD LHLKQIAYYK RIGEYHPTTL PSERSGIRRA AKKFAFKEKK BACU014808/1-523 MMVRSGKNGD LHLKQIAYYK RIGEYHPTTL PSERSGIRRA AKKFAFKEKK 51 100 ENSBTAP00000050552/1-499 ---------- ---------E KKKVLRECHE NDTGAHHGIS RTLTLVESSY ENSTTRP00000000995/1-522 LFYVGKDRKQ NRLVIVSEEE KKKVLRECHE NDTGAHHGIS RTLTLVESSY bmy_15458T0/1-523 LFYVGKDRKQ NRLVIVSEEE KKKVLRECHE NDTGAHHGIS RTLTLVESSY BACU014808/1-523 LFYVGKDRKQ NRLVIVSEEE KKKVLRECHE NDTGAHHGIS RTLTLVESSY 101 150 ENSBTAP00000050552/1-499 YWTSVTNDVK QWVYACQHCQ VAKNTVILAP KQHLLKVENP WSIVTVDLMG ENSTTRP00000000995/1-522 YWTSVTNDVK QWVYACQHCQ VAKNTVILAP KQHLLKVENP WSIVTVDLMG bmy_15458T0/1-523 YWTSVTNDVK QWVYACQHCQ VAKNTVILAP KQHLLKVENP WSIVTVDLMG BACU014808/1-523 YWTSVTNDVK QWVYACQHCQ VAKNTVILAP KQHLLKVENP WSIVTVDLMG 151 200 ENSBTAP00000050552/1-499 PFHTSNRSHV YAIIMTDLFT KWVVILPLCD VSASEISKAI INIFFLYGPP ENSTTRP00000000995/1-522 PFHTSSRSHV YAIIMTDLFT KWVVILPLCD VSASEISKAI INIFFLYGPP bmy_15458T0/1-523 PFHTSSRSHV YAIIMTDLFT KWVVILPLCD VSASEISKAI INIFFLYGPP BACU014808/1-523 PFHTSSRSHV YAIIMTDLFT KWVVILPLCD VSASEISKAI INIFFLYGPP 201 250 ENSBTAP00000050552/1-499 QKIIMDQRDE FIHQINVELC ELFGTKQIVI SHASQTINPA ESTPSTIKTF ENSTTRP00000000995/1-522 QKIIMDQRDE FIHQINVELC ELFGTKQIVI SHASQTINPT VSTPSTIKTF bmy_15458T0/1-523 QKIIMDQRDE FIHQINVELC ELFGTKQIVI SHASQTINPT VSTPSTIKTF BACU014808/1-523 QKIIMDQRDE FIHQINVELC ELFGTKQIVI SHASQTINPT VSTPSTIKTF 251 300 ENSBTAP00000050552/1-499 LSKHCVDYPN DWDDHLPAVS FAFNVTHLEP TKNTPYFQMF NRNPYMPESS ENSTTRP00000000995/1-522 LSKHCADYPN NWDDHLAAVS FAFNVTHSEP TKNTPYFQMF NRNLYMPETS bmy_15458T0/1-523 LSKHCADYPN NWDDHLAAVS FAFNVTHLES TKNTPYFQMF NRNLYMPETS BACU014808/1-523 LSKHCADYPN NWDDHLAAVS FAFNVTHLEP TKNTPYFQMF NRNLYMPETS 301 350 ENSBTAP00000050552/1-499 DI-REVDGDN TSMFAKILDA IKEADKIMEN KTTSVGQMEN NNCHELNKSK ENSTTRP00000000995/1-522 DILREVDGNN TSMFARILGA IKEADKVMEN KTTSAGQMEN NSFDELNKSK bmy_15458T0/1-523 DILREVDGNN TSMFARILGA IKEADKIMEN KTTSAGQMEN NSFDELNKSK BACU014808/1-523 DILREVDGNN TSMFARILGA IKEADKIMEN KTTSAGQMEN NSFDELNKSK 351 400 ENSBTAP00000050552/1-499 IIVKKKPKQQ NPFHLKVGHE VLRQRKNWWK DGRFRSEWVG PCVIDYITEN ENSTTRP00000000995/1-522 IIVKKKPKQL NPFQLKVGHE VLRQRKNWWK DGRFQSEWVG PCVIDYITEN bmy_15458T0/1-523 IIVKKKPKQL NPFHLKVGHE VLRQRKNWWK DGRFQSEWVG PCVIDYITEN BACU014808/1-523 IIVKKKPKQL NPFHLKVGHE VLRQRKNWWK DGRFQSEWVG PCVIDYITEN 401 450 ENSBTAP00000050552/1-499 GGAVLRDSSG ARLKRPIKMS HLKPYVRESG EQDSLHLLHG SVVADHDYVG ENSTTRP00000000995/1-522 GCAVLRDNTG TRLKRPIKMS HLKPYVRESS EQDSLYLLQG SVVADHDYIG bmy_15458T0/1-523 GCAVLRDNTG TRLKRPIKMS HLKPYVRESS EQDSLYLLQG SVVADHDYIG BACU014808/1-523 GCAVLRDNTG TRLKRPIKMS HLKPYVRESS EQDSLYLLQG SVVADHDYIG 451 500 ENSBTAP00000050552/1-499 MPELPVGAYQ ASILVEDAAI GVDDSELLTS SKDRELLEYR NAKISPLMED ENSTTRP00000000995/1-522 MPEISVGAYQ ANILVEDATI GVVDNELLTS SKDRELLEYR NAKISPLIED bmy_15458T0/1-523 MPEISVGAYQ ANILVEDATI GVVDNELLTS SKDRELLEYR NAKISPLIDD BACU014808/1-523 MPEISVGAYQ ANILVEDATI GVVDSELLTS SKDRELLEYR NAKISPLIDD 501 550 ENSBTAP00000050552/1-499 HNALEKQTFS LLDSSNQVLE YLT ENSTTRP00000000995/1-522 HSTLEKQTFS LLDSSNQVLE YLS bmy_15458T0/1-523 HSTLEKQTFS LLDSSNQVLE YLS BACU014808/1-523 HSTLEKQTFS LLDSSNQVLE YLS