KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:21 2014 Check: 00 .. Name: ENSP00000356737/1-394 Len: 410 Check: 1032 Weight: 1.00 Name: ENSBTAP00000050555/1-395 Len: 410 Check: 237 Weight: 1.00 Name: ENSTTRP00000008486/1-395 Len: 410 Check: 449 Weight: 1.00 Name: bmy_03687T0/1-358 Len: 410 Check: 8708 Weight: 1.00 Name: BACU019516/1-394 Len: 410 Check: 7193 Weight: 1.00 // 1 50 ENSP00000356737/1-394 ---------M SWAAVLAVAA ARFGHFWGCR W--PGPMAQG WAGFSEEELR ENSBTAP00000050555/1-395 ---------M CLGS--RVGS RGSEVWGTRR AGKPRRMAQG WAGFSEEELR ENSTTRP00000008486/1-395 ---------M CWVAVLAIGV LRFGFW--AR W-QVGRMARG WAGFSEEELR bmy_03687T0/1-358 SAAAREEPGC AWVAVLAIGA LRFGRS--RR AGKSRRMAQG WAGFSEEELR BACU019516/1-394 ---------- -WVAVLAIGA LRFGRS--RR AGKSRRMAQG WAGFSEEELR 51 100 ENSP00000356737/1-394 RLKQTKDPFE PQRRL-PAKK SRQQLQREKA LVEQSQKLGL QDGSTSLLPE ENSBTAP00000050555/1-395 RLKQTKDPFE PQRRL-PGKK SRQQLQRERA LQEQSQKFGL QDGSTSLPPE ENSTTRP00000008486/1-395 RLKQTKDPFE PQRRLLPVKK SRQQLQREKA LQEQSQKLGL QDGSTSLPPE bmy_03687T0/1-358 RLKQTKDPFE PQRRLVPVKK SRQQLQREKA LQEQSQKLGL QDGSTSLPPE BACU019516/1-394 RLKQTKDPFE PQRRLVPVKK SRQQLQREKA LQEQSQKLGL QDGSTSLPPE 101 150 ENSP00000356737/1-394 QLLSAPKQRV NVQKPPFSSP TLPSHFTLTS PVGDGQPQGI ESQPKELGLE ENSBTAP00000050555/1-395 QLLSAPKQRF NTQRPYSSPP TPL---TLTS PVGDGKPQGT ESQQKELGLK ENSTTRP00000008486/1-395 QLPSAPKQRF NTQRPCSSPP TPP---TLTS PVGDGKPQGI QSQPGELGLK bmy_03687T0/1-358 QLLSAPKQRF NTQRPCSSPP TPP---TLTS PIGDGKPQGI ESQPRELGLK BACU019516/1-394 QLLSAPKQRF NTQRPCSSPP TRP---TLTS PIGDGKPQGI ESQPRELGLK 151 200 ENSP00000356737/1-394 NSHDGHNNVE ILPPKPDCKL EKKKVELQEK SRWEVLQQEQ RLMEEKNKRK ENSBTAP00000050555/1-395 NSHEVHKNAE VLPLKADCQL EKKKVELQEK SRWEVLQQEQ RLMEEKNKRK ENSTTRP00000008486/1-395 NSHEGHKNAE VLPPKPDCKL EKKKVELQEK SRWEVLQQEQ RLMEEKNKRK bmy_03687T0/1-358 NSHEGHKNAE VLPPKPDCKL EKKKVELQGK SRWEVLQQEQ RLMEEKNKRK BACU019516/1-394 NSHEGHKNSE VLPPKPDCKL EKKKVELQEK SRWEVLQQEQ RLMEEKNKRK 201 250 ENSP00000356737/1-394 KALLAKAIAE RSKRTQAETM KLKRIQKELQ ALDDMVSADI GILRNRIDQA ENSBTAP00000050555/1-395 KALLAKAIAE RSKRTQAETM KLKRIQKELQ ALDDMVSADI GILRNRIDQA ENSTTRP00000008486/1-395 KALLAKAIAE RSKRTQAETM KLKRIQKELQ ALDDMVSADI GILRNRIDQA bmy_03687T0/1-358 KALLAKAIAE R--------- ---------- ---------- ---------- BACU019516/1-394 KALLAKAIAE RSKRTQAETM KLKRIQKELQ ALDDMVSADI GILRNRIDQA 251 300 ENSP00000356737/1-394 SLDYSYARKR FDRAEAEYIA AKLDIQRKTE IKEQLTEHLC TIIQQNELRK ENSBTAP00000050555/1-395 SLDYSYARKR FDRAEAEYVT AKLELQRKTE LKEQLTEHLC TIIQQNELRK ENSTTRP00000008486/1-395 SLDYSYAWKR FDRAEAEYVT AKLDLQRKTE LKEQLTEHLC TIIQQNELRK bmy_03687T0/1-358 --------KR FDRAEAEYVT AKLDLQRKTE LKEQLTEHLC TIIQQNELRK BACU019516/1-394 SLDYSYAWKR FDRAEAEYVT AKLDLQRKTE LKEQLTEHLC TIIQQNELRK 301 350 ENSP00000356737/1-394 AKKLEELMQQ LDVEADEETL ELEVEVERLL HEQEVESRRP VVRLERPFQP ENSBTAP00000050555/1-395 AKKLEELMQQ LDVHADEETL ELEVEVERLL CEQEAEARKQ VVHLERSFQP ENSTTRP00000008486/1-395 AKKLEELMQQ LDVHADEETL ELEVEVERLL CEQEAEVGKQ VVHSERPFQP bmy_03687T0/1-358 AKKLEELMQQ LDVHADEETL ELEVEVERLL CEQEAEVGKQ VVHLERPFQP BACU019516/1-394 AKKLEELMQQ LDVHADEETL ELEVEVERLL CEQEAEVGKQ VVHLERPFQP 351 400 ENSP00000356737/1-394 AEESVTLEFA KENRKCQEQA VSPKVDDQCG NSSSIPFLSP NCPNQEGN-- ENSBTAP00000050555/1-395 SGESVTLELA KENKKPQDQA ASPKVDEQGK NSNSIALLDP ERPNQEVETA ENSTTRP00000008486/1-395 SGENMTVGFA KENRKHQDQA ASPKVDEQCE SSSSIALLDP DQPNQEVETT bmy_03687T0/1-358 SGESMTLGCA KENKKHQDQA ASPKVDEQCE SSSSIALLDP DQPKQEVETT BACU019516/1-394 SGESMTLGCA KENKKHQDQA ASPKVDEQCE SSSSIALLDP DQPKQEVETT 401 450 ENSP00000356737/1-394 --DISAALAT ENSBTAP00000050555/1-395 VKDISASLIT ENSTTRP00000008486/1-395 VKDISAALTT bmy_03687T0/1-358 VKDISAALTT BACU019516/1-394 VKDISAALTT