KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:21 2014 Check: 00 .. Name: ENSP00000339787/1-711 Len: 804 Check: 8520 Weight: 1.00 Name: BACU009000/1-779 Len: 804 Check: 17 Weight: 1.00 Name: ENSBTAP00000050572/1-722 Len: 804 Check: 4069 Weight: 1.00 Name: ENSTTRP00000001497/1-710 Len: 804 Check: 9901 Weight: 1.00 Name: bmy_15359T0/1-686 Len: 804 Check: 318 Weight: 1.00 // 1 50 ENSP00000339787/1-711 ---------- ---------- ---------- -------MKL KLNVLTI-IL BACU009000/1-779 MSFGEPAVSQ SGNDGARYGS TVAPAPQTSV IFKYIVVRAY QADLKTVGLL ENSBTAP00000050572/1-722 ---------- ---------- ------RNKH HFRSLATMKL KQSVLTI-IL ENSTTRP00000001497/1-710 ---------- ---------- ---------- -------MKL KQTVLTI-IL bmy_15359T0/1-686 ---------- ---------- ---------- -------MKL KQNVLAI-IL 51 100 ENSP00000339787/1-711 LPVHLLIT-- ---------- -----IYSAL IFIPWYFLTN AKKKNAMAKR BACU009000/1-779 FCLHSFLSLE SRKIYGFILR EKEEILYSAL VFIPWYFLTN AKKKNAMAKR ENSBTAP00000050572/1-722 LPIHLLIT-- ---------- -----IYSAL IFIPWYFLTN AKKKNAMAKR ENSTTRP00000001497/1-710 LPIHLLIT-- ---------- -----IYSAL VFIPWYFLTN AKKKNAMAKR bmy_15359T0/1-686 LPIHLLIT-- ---------- -----IYSAL VFIPWYFLTN AKKKNAMAKR 101 150 ENSP00000339787/1-711 IKAKPTSDKP GSPYRSVTHF DSLAVIDIPG ADTLDKLFDH AVSKFGKKDS BACU009000/1-779 IKAKPTSDKP GSPYRSVTHF DSLAVIHIPG VDTLDKLFDH AVSKFGKKDS ENSBTAP00000050572/1-722 IKAKPTSDKP GSPYRSVTHF DSLAVIDIPG ADTLDKLFDH AVSKFGKKES ENSTTRP00000001497/1-710 IKAKPTSDKP GSPYRSVTHF DSLAVIDIPG ADTLDKLFDH AVSKFGKKDS bmy_15359T0/1-686 IKAKPTSDKP GSPYRSVTHF DSLAVIHIPG VDTLDKLFDH AVSKFGKKDS 151 200 ENSP00000339787/1-711 LGTREILSEE NEMQPNGKVF KKLILGNYKW MNYLEVNRRV NNFGSGLTAL BACU009000/1-779 LGTREILSEE NEMQPNGKVF KKLILGNYKW MNYLEVNHRV NNFGSGLAAL ENSBTAP00000050572/1-722 LGTREVLSEE NEMQPNGKVF KKLILGNYKW LNYLEVNRRV NNFGSGLTAL ENSTTRP00000001497/1-710 LGTREILSEE NEMQPNGKVF KKLILGNYKW MNYLEVNRRV NNFGSGLAAL bmy_15359T0/1-686 LGTREILSEE NEMQPNGKVF KKLILGNYKW MNYLEVNRRV NNFGSGLAAL 201 250 ENSP00000339787/1-711 GLKPKNTIAI FCETRAEWMI AAQTCFKYNF PLVTLYATLG KEAVVHGLNE BACU009000/1-779 GLKPKSTIAI FCETRAEWMI AAQTCFKYNF PLVTLYATLG REAVVHGLNE ENSBTAP00000050572/1-722 GLKPKSTIAI FCETRAEWMI AAQTCFKYNF PLVTLYATLG REAVVHGLNE ENSTTRP00000001497/1-710 GLKPKSTIAI FCETRAEWMI AAQTCFKYNF PLVTLYATLG KEAVVHGLNE bmy_15359T0/1-686 GLKPKSTIAI FCETRAEWMI AAQTCFKYNF PLVTLYATLG REAVVHGLNE 251 300 ENSP00000339787/1-711 SEASYLITSV ELLESKLKTA LLDISCVKHI IYVDNKAINK AEYPEGFEIH BACU009000/1-779 SEATYLITSV ELLESKLKNA LLDINCVKHI IYVDNKTINK AEYPEGFKIH ENSBTAP00000050572/1-722 SEATYLITSV ELLESKLKTA LIDINCVKHI IYVDNKTINK AEYPEGFEIH ENSTTRP00000001497/1-710 SEATYLITSV ELLESKLKTA LLDINCVKRI IYVDNKTINK AEYPEGFEIH bmy_15359T0/1-686 SEATYLITSV ELLESKLKNA LLDINCVKHI IYVDNKTINK AEYPEGFKIH 301 350 ENSP00000339787/1-711 SMQSVEELGS NPENL----- ---------- ---------- ---------- BACU009000/1-779 SMQSVEELGS KPENSIFPQQ GPVNSTVQRH EQTGIRLNIQ KMGQIEFEIL ENSBTAP00000050572/1-722 SMQSVEELGS KPENL----- ---------- ---------- ---------- ENSTTRP00000001497/1-710 SMQSVEELGS KPENS----- ---------- ---------- ---------- bmy_15359T0/1-686 SMQSVEELGS KPENS----- ---------- ---------- ---------- 351 400 ENSP00000339787/1-711 ---GIPPSRP TPSDMAIVMY TSGSTGRPKG VMMHHSNLIA GMTGQCERIP BACU009000/1-779 IAASVPPSRP TPSDLAIVMY TSGSTGRPKG VMMHHSNLIA GMTGQCERIP ENSBTAP00000050572/1-722 ---SVSPNRP TPSDLAIVMY TSGSTGRPKG VMMHHSNLIA GMTGQCERIP ENSTTRP00000001497/1-710 ---SVPPNRP TPSDLAIVMY TSGSTGRPKG VMMHHSNLIA GMTGQCERIP bmy_15359T0/1-686 ---SVPPNRP TPSDLAIVMY TSGSTGRPKG VMMHHSNLIA GMTGQCERIP 401 450 ENSP00000339787/1-711 GLGPKDTYIG YLPLAHVLEL TAEISCFTYG CRIGYSSPLT LSDQSSKIKK BACU009000/1-779 GLGPKDTYIG YLPLAHVLEL TAEISCFTYG CRIGYSSPLT LSDQSSKIKK ENSBTAP00000050572/1-722 GLGPKDTYIG YLPLAHVLEL TAEISCFTYG CRIGYSSPLT LSDQSSKIKK ENSTTRP00000001497/1-710 GLGPKDTYIG YLPLAHVLEL TAEISCFTYG CRIGYSSPLT LSDQSSKIKK bmy_15359T0/1-686 GLGPKDTYIG YLPLAHVLEL TAEISCFTYG CRIGYSSPLT LSDQSSKIKK 451 500 ENSP00000339787/1-711 GSKGDCTVLK PTLMAAVPEI MDRIYKNVMS KVQEMNYIQK TLFKIGYDYK BACU009000/1-779 GSKGDCTVLK PSLMAAVPEI MDRIYKNVMS KVQEMNYIQK TLFKIGYDYK ENSBTAP00000050572/1-722 GSKGDCTVLK PTLMAAVPEI MDRIYKNVMS KVQEMNYIQK TLFKIGYDYK ENSTTRP00000001497/1-710 GSKGDCTVLK PSLMAAVPEI MDRIYKNVMS KVQEMNYIQK TLFKIGYDYK bmy_15359T0/1-686 GSKGDCTVLK PSLMAAVPEI MDRIYKNVMS KVQEMNYIQK TLFKIGYDYK 501 550 ENSP00000339787/1-711 LEQIKKGYDA PLCNLLLFKK VKALLGGNVR MMLSGGAPLS PQTHRFMNVC BACU009000/1-779 LEQIKKGYDA PLCNLILFKK VKALLGGNVR MMLSGGAPLS PQTQRFMNVC ENSBTAP00000050572/1-722 LEQIKKGYDA PLCNLILFKK VKALLGGNVR MMLSGGAPLS PQTQRFMNVC ENSTTRP00000001497/1-710 LEQIKKGYDA PLC-LILFKK VKALLGGNVR MMLSGGAPLS PQTQRFMNVC bmy_15359T0/1-686 LEQIKKGYDA PLCNLILFKK VKALLGGNVR MMLSGGAPLS PQTQRFMNVC 551 600 ENSP00000339787/1-711 FCCPIGQGYG LTESCGAGTV TEVTDYTTGR VGAPLICCEI KLKDWQEGGY BACU009000/1-779 FCCPVGQGYG LTESCGAGTV T--------- ---------- ------EGGY ENSBTAP00000050572/1-722 FCCPVGQGYG LTETCGAGTV TEVTDYTTGR VGAPLICCEI KLKDWQEGGY ENSTTRP00000001497/1-710 FCCPVGQGYG LTESCGAGTV TEVTDYTTGR VGAPLICCEI KLKDWQEGGY bmy_15359T0/1-686 FCCPVGQGYG LTESCGAGTV T--------- ---------- ------EGGY 601 650 ENSP00000339787/1-711 TINDKPNPRG EIVIGGQNIS MGYFKNEEKT AEDYSVDENG QRWFCTGDIG BACU009000/1-779 TVHDKPNPRG EIVIGGQNIS MGYFKNEEKT AEDYSVDENG QRWFCTGDIG ENSBTAP00000050572/1-722 TIHDKPNPRG EIVIGGKNIS MGYFKNEEKT AEDYSVDENG QRWFCTGDIG ENSTTRP00000001497/1-710 TVHDKPNPRG EIVIGGQNIS MGYFKNEEKT AEDYSVDENG QRWFCTGDIG bmy_15359T0/1-686 TVHDKPNPRG EIVIGGQNIS MGYFKNEEKT AEDYSVDENG QRWFCTGDIG 651 700 ENSP00000339787/1-711 EFHPDGCLQI IDRKKDLVKL QAGEYVSLGK VEAALKNCPL IDNICAFAKS BACU009000/1-779 EFHPDGCLQI IDRKKDLVKL QAGEYVSLGK VEAALKNCPL IDNICAFAKS ENSBTAP00000050572/1-722 EFHPDGCLQI IDRKKDLVKL QAGEYVSLGK VEAALKNCPL IDNICAFAKS ENSTTRP00000001497/1-710 EFHPDGCLQI IDRKKDLVKL QAGEYVSLGK VEAALKNCPL IDNICAFAKS bmy_15359T0/1-686 EFHPDGCLQI IDRKKDLVKL QAGEYVSLGK VEAALKNCPL IDNICAFAKS 701 750 ENSP00000339787/1-711 DQSYVISFVV PNQKRLTLLA QQKGVEGTWV DICNNPAMEA EILKEIREAA BACU009000/1-779 DQSYVISFVV PNQQRLTLLA QQKGVEGTWV DICNDPAMEA EILKEIREAA ENSBTAP00000050572/1-722 DQSYVISFVV PNQQKLTLLA QQKGVEGTWV DICNNPAMEA EILKEIREAA ENSTTRP00000001497/1-710 DQSYVISFVV PNQQRLTLLA QQKGVEGTWV DICNDPAMEA EILKEIREAA bmy_15359T0/1-686 DQSYVISFVV PNQQRLTLLA QQKGVEGTWV DICNDPAMEA EILKEIREAA 751 800 ENSP00000339787/1-711 NAMKLERFEI PIKVRLSPEP WTPETGLVTD AFKLKRKELR NHYLKDIERM BACU009000/1-779 NTMKLERFET PIKVRLSPEP WTPETGLVTD AFKLKRKELK NHYLKDIERM ENSBTAP00000050572/1-722 NTMKLERFEI PIKVRLSPEP WTPETGLVTD AFKLKRKELK NHYLKDIERM ENSTTRP00000001497/1-710 NTMKLERFET PIKVRLSPEP WTPETGLVTD AFKLKRKELK NHYLKDIERM bmy_15359T0/1-686 NTMKLERFET PIKVRLSPEP WTPETGLVTD AFKLKRKELK NHYLKDIERM 801 850 ENSP00000339787/1-711 YGGK BACU009000/1-779 YGGK ENSBTAP00000050572/1-722 YGGK ENSTTRP00000001497/1-710 YGGK bmy_15359T0/1-686 YGGK