KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:23 2014 Check: 00 .. Name: ENSBTAP00000050597/1-1221 Len: 1296 Check: 322 Weight: 1.00 Name: ENSTTRP00000015220/1-1280 Len: 1296 Check: 800 Weight: 1.00 Name: BACU008605/1-520 Len: 1296 Check: 3318 Weight: 1.00 Name: bmy_13695T0/1-961 Len: 1296 Check: 1314 Weight: 1.00 // 1 50 ENSBTAP00000050597/1-1221 ---------- ---------- -MIPTSKGKN TKTQPPLSRM TRDELEDSLF ENSTTRP00000015220/1-1280 TSHLLVDNTA KAVRDIDPIP VMVPASKGKN VKTQLPLNRM TREELEDSLF BACU008605/1-520 ---------- ---------- ---------- ---------M TREELEDSLF bmy_13695T0/1-961 ---------- ---------- ---------- ---------M TREELEDSLF 51 100 ENSBTAP00000050597/1-1221 RLREEHMLVK ELFWKQQDEI KRMRTALLRL TASGQGLRAE AAAAESSGSP ENSTTRP00000015220/1-1280 RLREEHMLVK ELFWKQQDEV KRMRTALLRS AAAGRDRRAE VTAAEQLSGP BACU008605/1-520 RLREEHMLVK ELFWKQQDEI KRMRTALLRS AAAGRDWKAE VAAAEQLSGP bmy_13695T0/1-961 RLREEHMLVK ELFWKQQDEI KRMRTALLRS AGAGRDRKAE VAAAEQLSGP 101 150 ENSBTAP00000050597/1-1221 LNGGGTQSGG SAPSSTSVPR CPGSSCSSSA WAPLLP--AA PSL-ASTRDT ENSTTRP00000015220/1-1280 TRRRRNAGWR QRPPKHLRPQ LHGLQLQFQR VGPPAPRCSQ PRVHAGHRQL BACU008605/1-520 AGRRRNAGWR QRPPKHLRPP LHGLQLQFQG LGPPAPRCTQ PRVHAGHRQL bmy_13695T0/1-961 AGRRRNAGWR QRPPKHLRPP LHGLQLQFQR VGPPAPRCTQ PRVHAGHRQL 151 200 ENSBTAP00000050597/1-1221 DSSTPPGHRA EKPKRESRDR LSYTAPPTFK EHVTNEKARG EVASEPSEL- ENSTTRP00000015220/1-1280 HTAGAAG--A EKPKRESRDR LSYTAPPTFK EHVTNEKARG EVSSEPSEHI BACU008605/1-520 HTAGAAG--A EKPKRESRDR LSYTAPPTFK EHVTNEKARG EVSSDPSEH- bmy_13695T0/1-961 HTAGAAG--A EKPKKESRDR LSYTAPPTFK EHVTNEKARG EVSSEPSEH- 201 250 ENSBTAP00000050597/1-1221 ---------- ---------- ------GHLM TSDTMQVEEP PKSPEKMWSK ENSTTRP00000015220/1-1280 PNSNSIISFN KVIIMIKLTG LCMPNSAHIM TSDTMQVEEP PKSSEKMWSK BACU008605/1-520 ---------- ---------- ------AHIM TSDTMQVEEP PKSSEKMWSE bmy_13695T0/1-961 ---------- ---------- ------AHIM TSDTMQVEEP PKSSEKMWSK 251 300 ENSBTAP00000050597/1-1221 DENFAQRSSL ESTQKATELR ASIKENIQLI RLKKLLHERN TSLAVTKAQL ENSTTRP00000015220/1-1280 DENFAQRSSL ECAQKATELR ASIKENIQLI RLKKLLHERN TSLAATKAQL BACU008605/1-520 DENFAQRSSL ECAQKATELR ASIKENIQLI QLKKLLHERN TSLAVTKAQL bmy_13695T0/1-961 DENFAQRSSL ECAQKAAELR ASIKENIQLI QLKKLLHERN TSLAVTKAQL 301 350 ENSBTAP00000050597/1-1221 TEVQAAYETL LHKNQGILGA AHNALLSQVN ELRAELKEES KKAVSLKSQM ENSTTRP00000015220/1-1280 TEVQAAXXXX XXXXXXXXXX XHDALLSQVN ELRAELKEES KKAVSLKSQL BACU008605/1-520 TEVQA----- ---NQGILGT AHDALLSQVN ELRAELKEES KKAVSLKSQL bmy_13695T0/1-961 TEVQA----- ---------- AYETLL---- ---------- ---------- 351 400 ENSBTAP00000050597/1-1221 EDVSILQITL -------KEF QERVEDLEKE RKLLNDNYDK LLESMLDSSN ENSTTRP00000015220/1-1280 EDVSILQITL -------KEF QERVEDLEKE RKLLNDNYDK LLENMLDSSN BACU008605/1-520 EDVSILQITL KEALYYHSKF QERVEDLEKE RKLLNDNYDK LLENMLDSSN bmy_13695T0/1-961 ---------- -------QKF QERVEDLEKE RKLLNDNYDK LLENMLDSGN 401 450 ENSBTAP00000050597/1-1221 QPQWSHELGE QLQQKVSQLQ DQLDVEMKEK REILLQLSQE KAQNKDLELE ENSTTRP00000015220/1-1280 QPHWSNEQGE QLQQKVSQLQ DHLDAEVEEK RKVLLQLSRV KAQNKDLKLE BACU008605/1-520 QPHWSNEQGE QLQQKVSQLQ DQLDAELEEK RKVLLQLSRE EAQNKDLKLE bmy_13695T0/1-961 QPHWSNEQGE QLQQKVSQLQ DQLDAELEEK RKVLLQLSRE EAQNKDLKLE 451 500 ENSBTAP00000050597/1-1221 VTSLLQKHKQ EVEDLQNIST FSQSPDRQSA PATHPALFQE TIQIQPCEPK ENSTTRP00000015220/1-1280 VTNLLQKHKQ EVEDLRNKDT ISQSPDWQSE PATYPALFQE TTQIEPCEPK BACU008605/1-520 VTNLLQKHKQ EVEDLQNKDT ISQSPDWQSE PATYPALFQE TTQIEPCEPK bmy_13695T0/1-961 VTNLLQKHKQ EVEDIRNKDT ISQSPDWQSE PATYPALFQE TTQIEPCEPK 501 550 ENSBTAP00000050597/1-1221 NQEEKKLSQM LSELQVSHAE TTLELEKTRD MLILQRKINV CYQ-----EE ENSTTRP00000015220/1-1280 NQEEKKLSQM LSELQVLHAE TVLELEKTRD MLILQRKINV CYQ-----EE BACU008605/1-520 NQEEKKLSQM FSELQVLHAE TILELEKTRD MLILQRKINV CYQ-----EE bmy_13695T0/1-961 NQEEKKLSQM FSELQVLQAE TILELEKTRD MLILQRKINV CYQVQEKMEE 551 600 ENSBTAP00000050597/1-1221 LEAMMTKADN ENKDHEAKLE RLNQLLDLKN KRINQLE--- --------EQ ENSTTRP00000015220/1-1280 LEAMMTKADN ENKVHKEKLE RLNQLLDLKN KRINQLEGIL RSHGLPVSEQ BACU008605/1-520 LEAMMTKADN ENKDHKEKLE RLNQLLDLKN KRIKQLE--- ---------- bmy_13695T0/1-961 LEAMMTKADN ENKDHKEKLE RLNQLLDLKN KRIKQLE--- --------EQ 601 650 ENSBTAP00000050597/1-1221 LKDVAYGTRQ LPLCLKPLPA HENEDKVDIS PWHQSENLFE LHIHQAFLTS ENSTTRP00000015220/1-1280 LKDVAYGTRQ LSLCLKPLPD HGDEDKVDIS PRHQSENLFE LHIHQAFLTP BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 LRDVAYGTRQ LSLCLKPLPD HGDEDKVDIS PRHXSENLFE LHIHQAFLTP 651 700 ENSBTAP00000050597/1-1221 AALAQAGDTQ PTTFCTYSFY DFETHCTPLV VGPQPLYDFT SQYVVEIDSL ENSTTRP00000015220/1-1280 AALAQAGDTQ PTTFCTYSFY DFETHCTPLA VGLQPLYDFT SQYVVETDSL BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 AALAQAGDTQ PTTFCTYSFY DFETHCTPLA VGLQPLYDFT SQYVVETDSL 701 750 ENSBTAP00000050597/1-1221 FLHYLQGASA QLDLHQAIAS EHHTLAAGWI CFDRVLETVE RVHGSATLTG ENSTTRP00000015220/1-1280 FLHYLQGTSA QLHLHQAIAS EHRTLAAGWI CFDRVLETVE RVHGSATLTG BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 FLHYLQGTSA QLHLHQAIAS EHHTLAAGWI CFDRVLETVE RVHGSATLTG 751 800 ENSBTAP00000050597/1-1221 TGGEVFGVLE YWMRLRFPIR SSLQAYNKRK KAQAYLAANV LGAWEAQKDE ENSTTRP00000015220/1-1280 AGGEVFGVLE YWMRLHFPIR SSLQAYNKRK KAQAYLSANV LGAWEAQEDE BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 AGGEVFGVLE YWMRLRFPIR SSLQACNKRK KAQAYLSANV LGAWEAQEDE 801 850 ENSBTAP00000050597/1-1221 PRSGTWKNQN ELRVEIIRCC GLRSRSLGAQ PSPYVMYRFF TFSDHDTTII ENSTTRP00000015220/1-1280 PRSETRKHQN ELRVEVIRCC GLQSRWLGAQ PSPYAMYRFF TFSDHDTAII BACU008605/1-520 ---------- ----GILRSH GL-------- ---------- ---------- bmy_13695T0/1-961 PRSETRKHQN ELRVEVIRCC GLQSRWLGAQ PSPYAMYRFF TFSDHDTAVI 851 900 ENSBTAP00000050597/1-1221 PASSNPYFRD LARFPVLVTS DLDQYLRREA LSVYVFDDED SEPGSYLGRV ENSTTRP00000015220/1-1280 PASNNPYFRD EARFPVLVTS DLDQYLRQEA LSVYVFDDED SEPGSYLGRV BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 PASNNPYFRD QARFPVLVTS DLDQYLRQEA LSVYVFDDED SEPGSYLGRV 901 950 ENSBTAP00000050597/1-1221 QVPLLPLAQN KSIQGDFNLT DPVGEPNGSV QVQLDWGSCY LPPENFPKPE ENSTTRP00000015220/1-1280 QVPLLPLAQN KSIKGDFNLT DPGGKPNGFV QVQLDWKSCY LPPESFPKPK BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 QVPLLPLAQN KSIKGDFNLT DPGGKPNGSV QVQLDWKSCY LPPESFPKPE 951 1000 ENSBTAP00000050597/1-1221 AQSEE-DTRD GLETSIEEEE ASFPPQDQMV SIDTPTEAGQ YQAKRKPPQV ENSTTRP00000015220/1-1280 APSEEKDTKD SLDTSIEEEE ASFPP-DQMV SIEIPIEAGQ YQAKQKPPQV BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 ALSEEKDTKD SLDTSTEEEE ASFPPQDQMV SIEIPIEAGQ YQAKRKPPQV 1001 1050 ENSBTAP00000050597/1-1221 GERKEREHQV AGYSRRKHGR KTGLQGKNRM EYLSHNLLNG NTLQQVKYIE ENSTTRP00000015220/1-1280 GERKEGEHQV PGYS-RKQGK RTGIQGKNRM EYLSPNILSG NTLQQVNYTE BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 GERKEREQRV TGYSRRKHGK RTGIQGKNRM EYLSHNILNG NTL-QVNYTE 1051 1100 ENSBTAP00000050597/1-1221 WKFSGLKISA DHVLKNQQKE EEMTSSYSAQ ILKETPHPVN DKEFCEQASE ENSTTRP00000015220/1-1280 WKFSGLKIST DDGLKNQQKE EEMTSSLSAR ILKEALHPVN DKESCEQASE BACU008605/1-520 ---------- ---------- ---------- -------PIS ---------- bmy_13695T0/1-961 WKFSGLKIST DDGLKNQQKE EEMTSSHSAR ILKEALPPVN ---------- 1101 1150 ENSBTAP00000050597/1-1221 GSEAQTTDSD EIVTPVSQKC PKADSEKMCI EIVSLAFYPE AEVMCDENVE ENSTTRP00000015220/1-1280 VSEAQTTDSD EIVTPVSQKC PKAXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSBTAP00000050597/1-1221 QVYVEYRFYD LPLSETETPV SLRKPRAGEE IYFHFSKVID LDPVEQKERR ENSTTRP00000015220/1-1280 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXID LDPVEQKDRR BACU008605/1-520 ---------- ---------- ---------- ---------- ---------- bmy_13695T0/1-961 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSBTAP00000050597/1-1221 QFLFTMLIGE DPEQGHLKFT VVSDPIEEEK KECQEVGYAY LELWPMLVSG ENSTTRP00000015220/1-1280 QFLFAMLTGQ DPERGHLKFI VVSDPMDEEK KECQEVGYAY LELWQILESG BACU008605/1-520 ---------- ---------- ---------- ------G--- -KS------- bmy_13695T0/1-961 ---------- ---------- ---------- ------GIVF LKP------- 1251 1300 ENSBTAP00000050597/1-1221 RDILEQDLDI VGPEDQATPI GKLKVSLQAA AALQAIYKEM TEDLCS ENSTTRP00000015220/1-1280 RDIQEQELDI VSPEDQATPI GRLKVSLQAA AALHAIYKEM TEDVFL BACU008605/1-520 ---------- ---------- ---------- ---------- ------ bmy_13695T0/1-961 ---------- ---------- ---------- ---------- ------