KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:24 2014 Check: 00 .. Name: ENSP00000078429/1-359 Len: 371 Check: 6461 Weight: 1.00 Name: ENSTTRP00000011654/1-359 Len: 371 Check: 6507 Weight: 1.00 Name: ENSBTAP00000050620/1-359 Len: 371 Check: 6507 Weight: 1.00 Name: bmy_21000T0/1-300 Len: 371 Check: 798 Weight: 1.00 Name: BACU006461/1-349 Len: 371 Check: 1746 Weight: 1.00 // 1 50 ENSP00000078429/1-359 MTLESMMACC LSDEVKESKR INAEIEKQLR RDKRDARRE- ---------- ENSTTRP00000011654/1-359 MTLESMMACC LSDEVKESKR INAEIEKQLR RDKRDARRE- ---------- ENSBTAP00000050620/1-359 MTLESMMACC LSDEVKESKR INAEIEKQLR RDKRDARRE- ---------- bmy_21000T0/1-300 MEAPKMSVSR NKTFLSPNQL INGDFDPPFS LYLKTGCREP TARVAGPVPL BACU006461/1-349 MEAPKMSVSR NKTFLSPNQL INGDFDPPFS PYLKT----- ---------- 51 100 ENSP00000078429/1-359 -LKLLLLGTG ESGKSTFIKQ MRIIHGAGYS EEDKRGFTKL VYQNIFTAMQ ENSTTRP00000011654/1-359 -LKLLLLGTG ESGKSTFIKQ MRIIHGAGYS EEDKRGFTKL VYQNIFTAMQ ENSBTAP00000050620/1-359 -LKLLLLGTG ESGKSTFIKQ MRIIHGAGYS EEDKRGFTKL VYQNIFTAMQ bmy_21000T0/1-300 GLTGPFAGTG ESGKSTFIKQ MRIIHGAGYS EEDKRGFTKL VYQNIFTAMQ BACU006461/1-349 -------GTG ESGKSTFIKQ MRIIHGAGYS EEDKRGFTKL VYQNIFTAMQ 101 150 ENSP00000078429/1-359 AMIRAMETLK ILYKYEQNKA NALLIREVDV EKVTTFEHQY VSAIKTLWED ENSTTRP00000011654/1-359 AMIRAMETLK ILYKYEQNKA NALLIREVDV EKVTTFEHRY VSAIKTLWND ENSBTAP00000050620/1-359 AMIRAMETLK ILYKYEQNKA NALLIREVDV EKVTTFEHRY VSAIKTLWND bmy_21000T0/1-300 AMIRAMETLK ILYKYEQNKA NALLIREVDV EKVTTFEHRY VSAIKTLWND BACU006461/1-349 AMIRAMETLK ILYKYEQNKA NALLIREVDV EKVTTFEHRY VSAIKTLWND 151 200 ENSP00000078429/1-359 PGIQECYDRR REYQLSDSAK YYLTDVDRIA TLGYLPTQQD VLRVRVPTTG ENSTTRP00000011654/1-359 PGIQECYDRR REYQLSDSAK YYLTDVDRIA TSGYLPTQQD VLRVRVPTTG ENSBTAP00000050620/1-359 PGIQECYDRR REYQLSDSAK YYLTDVDRIA TSGYLPTQQD VLRVRVPTTG bmy_21000T0/1-300 PGIQECYDRR REYQLSDSAK YYLTDVDRIA TSGYLPTQQD VLRVRVPTTG BACU006461/1-349 PGIQECYDRR REYQLSDSAK YYLTDVDRIA TSGYLPTQQD VLRVRVPTTG 201 250 ENSP00000078429/1-359 IIEYPFDLEN IIFRMVDVGG QRSERRKWIH CFENVTSIMF LVALSEYDQV ENSTTRP00000011654/1-359 IIEYPFDLEN IIFRMVDVGG QRSERRKWIH CFENVTSIMF LVALSEYDQV ENSBTAP00000050620/1-359 IIEYPFDLEN IIFRMVDVGG QRSERRKWIH CFENVTSIMF LVALSEYDQV bmy_21000T0/1-300 IIEYPFDLEN IIFRYL-CPR TRPQAP---- ---------- --GVGQQERV BACU006461/1-349 IIEYPFDLEN IIFRMVDVGG QRSERRKWIH CFENVTSIMF LVALSEYDQV 251 300 ENSP00000078429/1-359 LVESDNENRM EESKALFRTI ITYPWFQNSS VILFLNKKDL LEDKILYSHL ENSTTRP00000011654/1-359 LVESDNENRM EESKALFRTI VTYPWFQNSS VILFLNKKDL LEDKILHSHL ENSBTAP00000050620/1-359 LVESDNENRM EESKALFRTI VTYPWFQNSS VILFLNKKDL LEDKILHSHL bmy_21000T0/1-300 LVHG------ ---------- ---------- ---------- ---------- BACU006461/1-349 LVESDNENRM EESKALFRTI VTYPWFQNSS VILFLNKKDL LEDKILHSHL 301 350 ENSP00000078429/1-359 VDYFPEFDGP QRDAQAAREF ILKMFVDLNP DSDKIIYSHF TCATDTENIR ENSTTRP00000011654/1-359 VDYFPEFDGP QRDAQAAREF ILKMFVDLNP DSDKIIYSHF TCATDTENIR ENSBTAP00000050620/1-359 VDYFPEFDGP QRDAQAAREF ILKMFVDLNP DSDKIIYSHF TCATDTENIR bmy_21000T0/1-300 --------CP QRDAQAAREF ILKMFVDLNP DSDKIIYSHF TCATDTENIR BACU006461/1-349 VDYFPEFDGP QRDAQAAREF ILKMFVDLNP DSDKIIYSHF TCATDTENIR 351 400 ENSP00000078429/1-359 FVFAAVKDTI LQLNLKEYNL V ENSTTRP00000011654/1-359 FVFAAVKDTI LQLNLKEYNL V ENSBTAP00000050620/1-359 FVFAAVKDTI LQLNLKEYNL V bmy_21000T0/1-300 FVFAAVKDTI LQLNLKEYNL V BACU006461/1-349 FVFAAVKDTI LQLNLKEYNL V