KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:27 2014 Check: 00 .. Name: ENSP00000326349/1-317 Len: 443 Check: 8918 Weight: 1.00 Name: ENSBTAP00000050676/1-317 Len: 443 Check: 1963 Weight: 1.00 Name: bmy_22113T0/1-443 Len: 443 Check: 3976 Weight: 1.00 Name: BACU004883/1-315 Len: 443 Check: 1481 Weight: 1.00 // 1 50 ENSP00000326349/1-317 MGMVRHTNES NLAGFILLGF SDYPQLQKVL FVLILILYLL TILGNTTIIL ENSBTAP00000050676/1-317 MGMVKSTNEG NITGFILLGF SDYPQLQMAL FVVILILYLL TILGNITIIL bmy_22113T0/1-443 MGMVKSTNES NITGFILLGF SDYPQLQKVL FVVILILYLL TILGNTTIIL BACU004883/1-315 --MVKSTNES DITGFILLGF SDYPQLQKVL FVVILILYLL TILGNTTIIL 51 100 ENSP00000326349/1-317 VSRLEPKLHM PMYFFLSHLS FLYRCFTSSV IPQLLVNLWE PMKTIAYGGC ENSBTAP00000050676/1-317 ISHLEPKLNT PMYFFLSHLS FLDLCFTSSV IPQLLVNLQD PMKTITYGGC bmy_22113T0/1-443 ISRLEPKLHT PMYFFLSHLS FLDLCFTSSV IPQLLVNLWN PMKTITYGGC BACU004883/1-315 ISRLEPKLHT PMYFFLSHLS FLDLCFTSSV IPQLLVNLWD PMKTITYGGC 101 150 ENSP00000326349/1-317 LVHLYNSHAL GSTECVLPAV MSCDRYVAVC RPLHYTVLMH IHLCMALASM ENSBTAP00000050676/1-317 VVQLYVSHAL GSTECVLLAV MSYDRYVAIC RPLHYALLMH PHLCMALTSL bmy_22113T0/1-443 VVQLYVSLAL GSTECVLLAL MSYDRYVAIC RPLHYTLLMH PHFCMTLTSL BACU004883/1-315 VVQLYVSLAL GSTECVLLAL MSYDRYVAIC RPLHYTLLMH PHFCMTLTSL 151 200 ENSP00000326349/1-317 AWLSGIATTL VQSTLTLQLP FCGHRQVDHF ICEVPVLIKL ACVGTTFNEA ENSBTAP00000050676/1-317 AWLSGVATTL VQSTLTLQLP LCGHHQVDHF ICEVPVLIKL ACVDTTFNEA bmy_22113T0/1-443 AWLSGVTTTL VQSTLTLQLP FCGHHQVDHF ICEVPVLIKL ACVDTTFNEA BACU004883/1-315 AWLSGVTTTL VQSTLTLQLP FCGQHQVDHF ICEVPVLIKL ACVDTTFNEA 201 250 ENSP00000326349/1-317 ELFVASILFL IVPVSFILVS SGYIAHAVLR IKSATRRQKA FGTCFSHLTV ENSBTAP00000050676/1-317 ELFVASILFL VVPISFILVS YGYITKAVLK INSATGRKKV FGTCSSHVTV bmy_22113T0/1-443 ELFVASILFL IVPVSFILVS YGYIAQAVLK IKSATGRKKV FGTCSSHVTV BACU004883/1-315 ELFVASILFL IVPVSFILVS YGYIAQAVLK IKSATGRKKV FGTCSSHVTV 251 300 ENSP00000326349/1-317 VTIFYGTIIF MYLQPAKSRS RDQGKFVSLF YTVVTRMLNP LIYTLRIKEV ENSBTAP00000050676/1-317 VIMFYGTIMF MYLQSAKSTY KDQGKFVSLF YTVVTPMLNP LIYTLRNKEV bmy_22113T0/1-443 VIIFYGTIMF MYLQSAKSTY KDQGKFVSLF YTVVTPMLNP LIYTLRNKEV BACU004883/1-315 VIIFYGTIMF MYLQSAKSTY KDQGKFVSLF YTVVTPMLNP LIYTLRNKEV 301 350 ENSP00000326349/1-317 KGALKKVLAK ALG------- ---------- ---------- ---------- ENSBTAP00000050676/1-317 KEALKKVLGK ILV------- ---------- ---------- ---------- bmy_22113T0/1-443 KGALRKVLGK IQVLQKVLFV IILILYLLTI LGTITVILLS HLDPKLHIPM BACU004883/1-315 KGALRKVLGK IQV------- ---------- ---------- ---------- 351 400 ENSP00000326349/1-317 ----VNIL-- ---------- ---------- ---------- ---------- ENSBTAP00000050676/1-317 ----IKFT-- ---------- ---------- ---------- ---------- bmy_22113T0/1-443 YFFLLNFSFL DLYFTIGIIP QILVNLRDSV KCVIQLYISH ALGFIVCILL BACU004883/1-315 ----VNFT-- ---------- ---------- ---------- ---------- 401 450 ENSP00000326349/1-317 ---------- ---------- ---------- ---------- --- ENSBTAP00000050676/1-317 ---------- ---------- ---------- ---------- --- bmy_22113T0/1-443 AMIAYNFYAA ICCPLYYVFI MHIDLCHIPV SLAWFSEIDP TMV BACU004883/1-315 ---------- ---------- ---------- ---------- ---