KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:29 2014 Check: 00 .. Name: ENSBTAP00000050703/1-1212 Len: 1261 Check: 5725 Weight: 1.00 Name: ENSP00000310565/1-1222 Len: 1261 Check: 9206 Weight: 1.00 Name: ENSTTRP00000016114/1-1222 Len: 1261 Check: 4066 Weight: 1.00 Name: bmy_18166T0/1-1258 Len: 1261 Check: 4560 Weight: 1.00 Name: BACU013819/1-1197 Len: 1261 Check: 3925 Weight: 1.00 // 1 50 ENSBTAP00000050703/1-1212 ---------- ---------- ---------- ------MALM FTGHCLFLVL ENSP00000310565/1-1222 ---------- ---------- ------MPKG GAPPWIMALM FTGHLLFLAL ENSTTRP00000016114/1-1222 ---------- ---------- ------MPKE GAPRWIMALM FTGHFLFLLL bmy_18166T0/1-1258 AGARARGRSL LQCGGRRAGG AGSPAGGPRG PAP---SAEQ FSPTLRLRLL BACU013819/1-1197 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000050703/1-1212 ---------- ---VMFAFST LEESVSNYSD WAVFPDDIDP FKTQRVQDVR ENSP00000310565/1-1222 ---------- ---LMFAFST FEESVSNYSE WAVFTDDIDQ FKTQKVQDFR ENSTTRP00000016114/1-1222 ---------- ---VMFAFST FEESVSNYSD WAVFPDDIDQ LKTQKVQDFR bmy_18166T0/1-1258 RAHRCRETPS GPAKMFAFST FEESVSNYSD WAVFPDDIDQ LKTQKVQDFR BACU013819/1-1197 ---------- ----MFAFST FEESVSNYSD WAVFPDDVDQ LKTQKVQDFR 101 150 ENSBTAP00000050703/1-1212 PNQKPKKSML HPRLYFDAGE IQAMRQKSRT THLHLFRAIR SAVTAMLSNP ENSP00000310565/1-1222 PNQKLKKSML HPSLYFDAGE IQAMRQKSRA SHLHLFRAIR SAVTVMLSNP ENSTTRP00000016114/1-1222 PNQKLKKTML HPHLYFDAGE IQAMRQKSRT SHLHLFRAIR SAVMVMLSNP bmy_18166T0/1-1258 PNQKLKKSML HPHLYFDAGE IQAMRQKSRT SHVHLFRAIR SAVTVMLSNP BACU013819/1-1197 PSQKLKKSML HPHLYFDAGE IQAMRQKSRT SHVHLFRAIR SAVTVMLSNP 151 200 ENSBTAP00000050703/1-1212 TYYLPPPKHA DFAAKWNEIY GNNLPPLALY CLLCPEDKVA FEFALEYMDR ENSP00000310565/1-1222 TYYLPPPKHA DFAAKWNEIY GNNLPPLALY CLLCPEDKVA FEFVLEYMDR ENSTTRP00000016114/1-1222 TYYLPPPKHA DFAAKWNEIY GNNLPPLALY CLLCPEDKVA FEFVLEYMDR bmy_18166T0/1-1258 TYYLPPPKHA DFAAKWNEIY GNNLPPLALY CLLCPEDRVA FEFVLEYMDR BACU013819/1-1197 TYYLPPPKHA DFAAKWNEIY GNNLPPLALY CLLCPDDRVA FEFVLEYMDR 201 250 ENSBTAP00000050703/1-1212 MVGYKDWLVE NAPGDEVPVG HSLTGFATAF DFLYNLLDGR RRQKYLEKIW ENSP00000310565/1-1222 MVGYKDWLVE NAPGDEVPIG HSLTGFATAF DFLYNLLDNH RRQKYLEKIW ENSTTRP00000016114/1-1222 MVGYKDWLVE NAPGDEVPVG HSLTGFATAF DFLYNLLDDH RRQKYLEKIW bmy_18166T0/1-1258 MLGYKDWLVE NAPGDEVPVG HSLTGFATAF DFLYNVLDDH RRQKYLEKIW BACU013819/1-1197 MLGYKDWLVE NAPGDEVPVG HSLTGFATAF DFLYNVLDDH RRQKYLEKIW 251 300 ENSBTAP00000050703/1-1212 VITEEMYEYS KVRSWGKQLL HNHQATNMIA LLTGALVTGV DKGSKVNLWK ENSP00000310565/1-1222 VITEEMYEYS KVRSWGKQLL HNHQATNMIA LLTGALVTGV DKGSKANIWK ENSTTRP00000016114/1-1222 VITEEMYEYS KVRSWGKQLL HNHQATNMIA LLTGALVTGV DKGSKVNLWK bmy_18166T0/1-1258 VITEEMYEYS KVRSWGKQLL HNHQATNMIA LLTGALVTGA DKGSQVNLWK BACU013819/1-1197 VITEEMYEYS KVRSWGKQLL HNHQATNMIA LLTGALVTGA DKGSQVNLWK 301 350 ENSBTAP00000050703/1-1212 QVVVDVMEKT MFLLNHIVDG SLDEGVAYGS YTAKSVTQYV FLAQRHFNIN ENSP00000310565/1-1222 QAVVDVMEKT MFLLNHIVDG SLDEGVAYGS YTAKSVTQYV FLAQRHFNIN ENSTTRP00000016114/1-1222 QVVVDVMEKM MFLLNHIVDG TLDEGVAYGS YTAKSVTQYV FLAQRHFNIN bmy_18166T0/1-1258 QVVVDVMEKM MFLLNHIVDG TLDEGVAYGS YTAKSVTQYV FLAQRHFNIN BACU013819/1-1197 RVVVDVMEKM MFLLNHIVDG TLDEGVAYGS YTAKSVTQYV FLAQRHFNIN 351 400 ENSBTAP00000050703/1-1212 NLDNNWLKMH FWFYYATLLP GFQRTVGIAD SNYNWFYGPE SQLVFLDKFV ENSP00000310565/1-1222 NLDNNWLKMH FWFYYATLLP GFQRTVGIAD SNYNWFYGPE SQLVFLDKFI ENSTTRP00000016114/1-1222 NLDNNWLKMH FWFYYATLLP GFQRTVGIAD SNYNWFYGPE SQLVFLDKFV bmy_18166T0/1-1258 NLDNNWLKMH FWFYYATLLP GFQRTVGIAD SNYNWFYGPE SQLVFLDKFI BACU013819/1-1197 NLDNNWLRMH FWFYYATLLP GFQRTVGIAD SNYNWFYGPE SQLVFLDKFV 401 450 ENSBTAP00000050703/1-1212 LKNGAGNWLA QQIRRHRPKD GPMVPSTAQR WSTLHTEYIW YDPQLTPQPP ENSP00000310565/1-1222 LKNGAGNWLA QQIRKHRPKD GPMVPSTAQR WSTLHTEYIW YDPQLTPQPP ENSTTRP00000016114/1-1222 LKNGAGNWLA QQIRRHRPKD GPMVPSTAQR WSTLHTEYIW YDPQLTPRPP bmy_18166T0/1-1258 LKNGAGNWLA QQIRRHRPKD GPMVPSTAQR WSTLHTEYIW YDPQLTPRPP BACU013819/1-1197 LKNGAGNWLA QQIRRHRPKD GPMVPSTAQR WSTLHTEYIW YDPQLTPRPP 451 500 ENSBTAP00000050703/1-1212 AEYGTAKMHM FPNWGVVTYG AGLPNTQTNT FVSFKSGKLG GRAVYDIVHF ENSP00000310565/1-1222 ADYGTAKIHT FPNWGVVTYG AGLPNTQTNT FVSFKSGKLG GRAVYDIVHF ENSTTRP00000016114/1-1222 AEYGTAKMHT FPNWGVVTYG AGLPNTQTNT FVSFKSGKLG GRAVYDIVHF bmy_18166T0/1-1258 AEYGTAKMHT FPNWGVVTYG AGLPNTQTNT FVSFKSGKLG GRAVYDIVHF BACU013819/1-1197 AEYGTAKMHT FPNWGVVTYG AGLPNTQTNT FVSFKSGKLG GRAVYDIVHF 501 550 ENSBTAP00000050703/1-1212 QPYSWIDGWR SFNPGHEHPD QNSFTFAPNG QVFVSEALYG PKLSHLNNVL ENSP00000310565/1-1222 QPYSWIDGWR SFNPGHEHPD QNSFTFAPNG QVFVSEALYG PKLSHLNNVL ENSTTRP00000016114/1-1222 QPYSWIDGWR SFNPGHEHPD QNSFTFAPNG QVFVSEALYG PKLSHLNNVL bmy_18166T0/1-1258 QPYSWIDGWR SFNPGHEHPD QNSFTFAPNG QVFVSEALYG PKLSHLNNVL BACU013819/1-1197 QPYSWIDGWR SFNPGHEHPD QNSFTFAPNG QVFVSEALYG PKLSHLNNVL 551 600 ENSBTAP00000050703/1-1212 VFAPSPTSQC NKPWEGQLGE CAQWLKWTGE EVGDAAGEII TASQHGDMIF ENSP00000310565/1-1222 VFAPSPSSQC NKPWEGQLGE CAQWLKWTGE EVGDAAGEII TASQHGEMVF ENSTTRP00000016114/1-1222 VFAPSPTSQC NKPWEGQLGE CAQWLKWTGE EVGDAAGEII TASQHGDMVF bmy_18166T0/1-1258 VFAPSPTSQC NKPWEGQLGE CAQWLKWTGE EVGDAAGEII TASQHGDMVF BACU013819/1-1197 VFAPSPTSQC NKPWEGQLGE CAQWLKWTGE EVGDAAGEII TASQHGDMVF 601 650 ENSBTAP00000050703/1-1212 VSGEAVSAYS SAMKLKSVYR ALLLLNSQTL LVVDHVEKQE DSPIKSVSAF ENSP00000310565/1-1222 VSGEAVSAYS SAMRLKSVYR ALLLLNSQTL LVVDHIERQE DSPINSVSAF ENSTTRP00000016114/1-1222 VSGEAVSAYS SAMKLKSVYR ALLLLNSQTL LVVDHVERQE DSPIKSVSAF bmy_18166T0/1-1258 VSGEAVSAYS SAMKLKSVYR ALLLLNSQTL LVVDHVEXQE DSPIKSVSAF BACU013819/1-1197 VSGEAVSAYS SAMKLKSVYR ALLLLNSQTL LVVDHVERQE DSPIKSVSAF 651 700 ENSBTAP00000050703/1-1212 FHNLDIDFKY IPYRFMNRYN GALMDVWDAH YKMFWFDHRG SSPLASIQEA ENSP00000310565/1-1222 FHNLDIDFKY IPYKFMNRYN GAMMDVWDAH YKMFWFDHHG NSPMASIQEA ENSTTRP00000016114/1-1222 FHNLDIDFKY IPYRFMNRYN GAMMDVWDAH YKMFWFDHRG SSPIASIQEA bmy_18166T0/1-1258 FHNLDIDFKY IPYRFMNRYN GAMMDVWDAH YKMFWFDHRX SSPIASIQEA BACU013819/1-1197 FHNLDIDFKY IPYRFMNRYN GAMMDVWDAH YKMFWFDHRG SSPIASIQEA 701 750 ENSBTAP00000050703/1-1212 EQAAEFKKRW TQFVNVTFQM ESAITRIAYV FYGPYVNVSS CRFIDNSNSG ENSP00000310565/1-1222 EQAAEFKKRW TQFVNVTFQM EPTITRIAYV FYGPYINVSS CRFIDSSNPG ENSTTRP00000016114/1-1222 EQAAEFKKRW TQFVNVTFQM ESTITRIVYV FYGPYVNVSS CRFIDNSNSG bmy_18166T0/1-1258 EQAAEFKKRW TQFVNVTFQM ESTITRIVYV FYGPYVNVSS CRFIDNSNSG BACU013819/1-1197 EQAAEFKKRW TQFVNVTFQM ESTITRIVYV FYGPYVNVSS CRFIDNSNSG 751 800 ENSBTAP00000050703/1-1212 LQLSLNVNNT DHVVSIVTDY QNLKTRFDYL GFGGFATVAD QAQVTRFGLG ENSP00000310565/1-1222 LQISLNVNNT EHVVSIVTDY HNLKTRFNYL GFGGFASVAD QGQITRFGLG ENSTTRP00000016114/1-1222 LQISLNVNNT EHVVSIVTDY HNLKTRFDYL GFGGFASVAD QVQITRFGLG bmy_18166T0/1-1258 LQISLNVNNT EHVVSIVTDY HNLKTRFDYL GFGGFASVAD QVQITRFGLG BACU013819/1-1197 LQISLNVNNT EHVVSIVTDY HNLKTRFDYL GFGGFASVAD QVQITRFGLG 801 850 ENSBTAP00000050703/1-1212 TEAIVKPIRR DRVIFPFGFK FNVAVGLILC IGLVILTFQW RFYLSFRKLM ENSP00000310565/1-1222 TQAIVKPVRH DRIIFPFGFK FNIAVGLILC ISLVILTFQW RFYLSFRKLM ENSTTRP00000016114/1-1222 TQAIVKPVRR DRVIFPFGFK FNVAVGLILC VSLVILTFQW RFYLSFRKLM bmy_18166T0/1-1258 TQAIVKPIRR DRVIFPFGFK FNVAVGLILC ISLVILTFQW RFYLSFRKLM BACU013819/1-1197 TQAIVKPIRH DRVIFPFGFK FNVAVGLILC ISLVILTFQW RFYLSFRKLM 851 900 ENSBTAP00000050703/1-1212 RWILILVIAL WSVELLDVWS ACTQPICAKW ARPETEASGQ ALAPGGQRTD ENSP00000310565/1-1222 RWILILVIAL WFIELLDVWS TCSQPICAKW TRTEAEGSKK SLSSEGHHMD ENSTTRP00000016114/1-1222 RWILTLVIAL WFVELVDVWS TCTQPICAKW ARPEAEASPK PVSPQGHRID bmy_18166T0/1-1258 RWILTLVIAL WFVELVDVWS TCTQPICAKW ARPEAEASAK PVPPQGHRIY BACU013819/1-1197 RWILTLVIAL WFVELVDVWS TCTQPICAKW ARPEAEASAK PVSPQGHRIY 901 950 ENSBTAP00000050703/1-1212 PPDVVITSLP GSGAEILKQL FFNSSDFLYI RVPTAYIDIP ETELEIDSFV ENSP00000310565/1-1222 LPDVVITSLP GSGAEILKQL FFNSSDFLYI RVPTAYIDIP ETELEIDSFV ENSTTRP00000016114/1-1222 LPDIVITSLP GSGAEILKQL FFNSSDFLYI RVPTAYIDIP ETDFEIDSFV bmy_18166T0/1-1258 LPDIVITSLP GSGAEILKQL FFNSSDFLYI RVPTAYMDIP ETDFEMDSFV BACU013819/1-1197 LPDIVITSLP GSGAEILKQL FFNSSDFLYI RVPTAYMDIP ETDFEMDSFV 951 1000 ENSBTAP00000050703/1-1212 DACEWTASEV HGVRFRLLRG WLQSLVRDTK LHLQNIHLHE PSRGKLAQYF ENSP00000310565/1-1222 DACEWKVSDI RSGHFRLLRG WLQSLVQDTK LHLQNIHLHE PNRGKLAQYF ENSTTRP00000016114/1-1222 DACEWKASDV HGVHFRLLRG WLQSLVQDTK LHLQNIHLHE PGRGKLAQYF bmy_18166T0/1-1258 DACEWKASDV HGVHFRLLRG WLQSLVQDTK LHLQNIHLHE PSRGKLAQYL BACU013819/1-1197 DACEWKASDV HGVHFRLLRG WLQSLVQDTK LHLQNIHLHE PSRGKLAQYL 1001 1050 ENSBTAP00000050703/1-1212 SMNKDKKRKL KRRESLAEQR SRMKGAFDRD AEYVRALRRH LVHYPSARPV ENSP00000310565/1-1222 AMNKDKKRKF KRRESLPEQR SQMKGAFDRD AEYIRALRRH LVYYPSARPV ENSTTRP00000016114/1-1222 TTNKDKKRKL KRRESLPEQR SRMKGAFDRD AEYIRALRRH LVRYPSARPV bmy_18166T0/1-1258 TTNKDKKRKL KRRESLPEQR SRMKGAFDRD AEYIRALRRH LVRYPSARPV BACU013819/1-1197 STNKDKKRKL KRRESLPEQR SRMKGAFDRD AEYIRALRRH LVHYPSARPV 1051 1100 ENSBTAP00000050703/1-1212 LSLGSGSWTL KLHFFNEVLG ASMRALYVVR DPRAWVYSML YSSKPSLYSL ENSP00000310565/1-1222 LSLSSGSWTL KLHFFQEVLG ASMRALYIVR DPRAWIYSML YNSKPSLYSL ENSTTRP00000016114/1-1222 LSLNSGSWTL KLHFFHEVLG ASMRALYVVR DPRAWIYSML YSSKPSLYSL bmy_18166T0/1-1258 LSLSSGSWTL KLHFFHEVLG ASMRALYVVR DPRAWIYSML YSSKPSLYSL BACU013819/1-1197 LSLTSGSWTL KLHFFHEVLG ASMRALYVVR DPRAWIYSML YSSKPSLYSL 1101 1150 ENSBTAP00000050703/1-1212 KNVQEHLAKL FKTEGSAGRC TLNSGYAVEY ELLRKELLAS RPHPVSLLAH ENSP00000310565/1-1222 KNVPEHLAKL FKIEGGKGKC NLNSGYAFEY EPLRKELSKS KSNAVSLLSH ENSTTRP00000016114/1-1222 KNVPEHLAKL FKIEGGKGKC NLNSGYASEY ESLRKELSKS KPHAVSLLAH bmy_18166T0/1-1258 KNVPEHLAKL FKIEGGKGKC NLNSGYASEY ESLRKELSKS KPHAVSLLAH BACU013819/1-1197 KNVPEHLAKM FKIEGGKGKC NLNSGYASEY ESLRKELSKS KPHAVSLLAH 1151 1200 ENSBTAP00000050703/1-1212 AWLANTAAAL RLNADLLPTS YQLIKFEDLV HFPQNTTERI FAFLGIPLSP ENSP00000310565/1-1222 LWLANTAAAL RINTDLLPTS YQLVKFEDIV HFPQKTTERI FAFLGIPLSP ENSTTRP00000016114/1-1222 VWLANTAAAL RINTDLLPTS YQMIKFEDIV HFPQKTTERI FAFLGIPLSP bmy_18166T0/1-1258 VWLANTAAAL RINTDLLPTS YQMIKFEDIV HFPQKTTERI FAFLGIPLSP BACU013819/1-1197 VWLANTAAAL RINTDLLPTS YQMIKFEDIV HFPQKTTERI FAFLGIPLSP 1201 1250 ENSBTAP00000050703/1-1212 ATLNQILFAT STNLFYLPYE GEISPANTNV WKRNLPKDEI KLIENICWTL ENSP00000310565/1-1222 ASLNQILFAT STNLFYLPYE GEISPTNTNV WKQNLPRDEI KLIENICWTL ENSTTRP00000016114/1-1222 ASLNQILFAT STNLFYLPYE GEISPTNTNV WKQNLPRDEI KLIENICWTL bmy_18166T0/1-1258 ASLNQILFAT STNLFYLPYE GEISPTNTNV WKQNLPRDEI KLIENICWTL BACU013819/1-1197 ASLNQILFAT STNLFYLPYE GEISPTNTNV WKQNLPRDEI KLIENICWTL 1251 1300 ENSBTAP00000050703/1-1212 MDRLGYPKFM D ENSP00000310565/1-1222 MDRLGYPKFM D ENSTTRP00000016114/1-1222 MDRLGYPKFM D bmy_18166T0/1-1258 MDRLGYPKFM D BACU013819/1-1197 MDRLGYPKFM D