KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:30 2014 Check: 00 .. Name: ENSTTRP00000002853/1-475 Len: 498 Check: 4276 Weight: 1.00 Name: ENSP00000359121/1-458 Len: 498 Check: 5787 Weight: 1.00 Name: ENSBTAP00000050727/1-458 Len: 498 Check: 5255 Weight: 1.00 Name: bmy_15734T0/1-464 Len: 498 Check: 9926 Weight: 1.00 Name: BACU018701/1-478 Len: 498 Check: 5531 Weight: 1.00 // 1 50 ENSTTRP00000002853/1-475 MSLPLLKLGA VLSTMAMISN WMSQTLPSLV GLNTTRLSTP DTLTQISPKE ENSP00000359121/1-458 MQATSNLLNL LLLSL----- --------FA GLDPS----- --KTQISPKE ENSBTAP00000050727/1-458 MQATSNLLNL LLLSL----- --------LA GLDPS----- --KTQISPKE bmy_15734T0/1-464 ---------- ---------- --------MV CLCNT----- -CQTQISPKE BACU018701/1-478 MSLPLLKLGA VLSTMAMISN WMSQTLPSLV GLNTTRLSTP DTLTQISPKE 51 100 ENSTTRP00000002853/1-475 GWQVYSSAQD PDGRCICTVV APEQNLCSRD AKSRQLRQLL EKV-NMSQSI ENSP00000359121/1-458 GWQVYSSAQD PDGRCICTVV APEQNLCSRD AKSRQLRQLL EKVQNMSQSI ENSBTAP00000050727/1-458 GWQVYSSAQD PDGRCICTVV APEQNLCSRD AKSRQLRQLL EKVQNMSQSI bmy_15734T0/1-464 GWQVYSSAQD PDGRCICTVV APEQNLCSRD AKSRQLRQLL EKVQNMSQSI BACU018701/1-478 GWQVYSSAQD PDGRCICTVV APEQNLCSRD AKSRQLRQLL EKVQNMSQSI 101 150 ENSTTRP00000002853/1-475 EVLNL-TQRD F-YVLKXXXX XXXXXXXXXX XXXXXXXXXX XXXXELKEKM ENSP00000359121/1-458 EVLNLRTQRD FQYVLKMETQ MKGLKAKFRQ IEDDRKTLMT KHFQELKEKM ENSBTAP00000050727/1-458 EVLNLRTQRD FQYVLKMETQ MKGLKAKFRQ IEDDRKTLMT KHFQELKEKM bmy_15734T0/1-464 EVLNLRTQRD FQYVLKMETQ MKGLKAKFRQ IEDDRKTLMT KHFQELKEKM BACU018701/1-478 EVLNLRTQRD FQYVLKMETQ MKGLKAKFRQ IEDDRKTLMT KHFQELKEKM 151 200 ENSTTRP00000002853/1-475 DELLPLIPVL EQYKTDAKLI TQFKEEIRNL SAVLTGIQEE IGAYDYEELH ENSP00000359121/1-458 DELLPLIPVL EQYKTDAKLI TQFKEEIRNL SAVLTGIQEE IGAYDYEELH ENSBTAP00000050727/1-458 DELLPLIPVL EQYKTDAKLI TQFKEEIRNL SAVLTGIQEE IGAYDYEELH bmy_15734T0/1-464 DELLPLIPVL EQYKTDAKLI TQFKEEIRNL SAVLTGIQEE IGAYDYEELH BACU018701/1-478 DELLPLIPVL EQYKTDAKLI TQFKEEIRNL SAVLTGIQEE IGAYDYEELH 201 250 ENSTTRP00000002853/1-475 QRVLSLETRL RDCMKKLTC- ---------- ---------G KLMKITGPVT ENSP00000359121/1-458 QRVLSLETRL RDCMKKLTC- ---------- ---------G KLMKITGPVT ENSBTAP00000050727/1-458 QRVLSLETRL RDCMKKLTC- ---------- ---------G KLMKITGPIT bmy_15734T0/1-464 QRVLSLETRL RDCMKKLICV LESLATFTQH VHVTLISACG KLMKITGPVT BACU018701/1-478 QRVLSLETRL RDCMKKLTC- ---------- ---------G KLMKITGPVT 251 300 ENSTTRP00000002853/1-475 VKTSGTRFGA WMTDPLASEK NNRVWYMDSY TNNKIVREYK SIADFVSGAE ENSP00000359121/1-458 VKTSGTRFGA WMTDPLASEK NNRVWYMDSY TNNKIVREYK SIADFVSGAE ENSBTAP00000050727/1-458 VKTSGTRFGA WMTDPLASEK NNRVWYMDSY TNNKIVREYK SIADFVSGAE bmy_15734T0/1-464 IKTSGTRFGA WMTDPLASEK NNRVWYMDSY TNNKIVREYK SIADFVSGAE BACU018701/1-478 IKTSGTRFGA WMTDPLASEK NNRVWYMDSY TNNKIVREYK SIADFVSGAE 301 350 ENSTTRP00000002853/1-475 SRTYNLPFKW AGTNHVVYNG SLYFNKYQSN IIIKYSFDMG RVLAQRSLEY ENSP00000359121/1-458 SRTYNLPFKW AGTNHVVYNG SLYFNKYQSN IIIKYSFDMG RVLAQRSLEY ENSBTAP00000050727/1-458 SRTYNLPFKW AGTNHVVYNG SLYFNKYQSN IIIKYSFDLG RVLAQRSLEY bmy_15734T0/1-464 SRTYNLPFKW AGTNHVVYNG SLYFNKYQSN IIIKYSFDTG RVLAQRSLEY BACU018701/1-478 SRTYNLPFKW AGTNHVVYNG SLYFNKYQSN IIIKYSFDMG RVLAQRSLEY 351 400 ENSTTRP00000002853/1-475 AGFHNVYPYT WGGFSDIDLM ADEIGLWAVY ATNQNAGNIV ISQLNKDTLE ENSP00000359121/1-458 AGFHNVYPYT WGGFSDIDLM ADEIGLWAVY ATNQNAGNIV ISQLNQDTLE ENSBTAP00000050727/1-458 AGFHNVYPYT WGGFSDIDLM ADEIGLWAVY ATNQNAGNIV ISQLNQDTLE bmy_15734T0/1-464 AGFHNVYPYT WGGFSDIDLM ADEIGLWAVY ATNQNAGNIV ISQLNKDTLE BACU018701/1-478 AGFHNVYPYT WGGFSDIDLM ADEIGLWAVY ATNQNAGNIV ISQLNKDTLE 401 450 ENSTTRP00000002853/1-475 VMKSWSTGYP KRSAGESFMI CGTLYVTNSH LTGAKVYYSY STKTSTYEYT ENSP00000359121/1-458 VMKSWSTGYP KRSAGESFMI CGTLYVTNSH LTGAKVYYSY STKTSTYEYT ENSBTAP00000050727/1-458 VMKSWNTGYP KRSAGESFMI CGTLYVTNSH LTGAKVYYSY STKTSTYEYT bmy_15734T0/1-464 VMKSWSTGYP KRSAGESFMI CGTLYVTNSH LTGAKVYYSY STKTSTYEYT BACU018701/1-478 VMKSWSTGYP KRSAGESFMI CGTLYVTNSH LTGAKVYYSY STKTSTYEYT 451 500 ENSTTRP00000002853/1-475 DIPFHNQYFH ISMLDYNARD RALYAWNNGH QVLFNVTLFH IIKTEDDT ENSP00000359121/1-458 DIPFHNQYFH ISMLDYNARD RALYAWNNGH QVLFNVTLFH IIKTEDDT ENSBTAP00000050727/1-458 DIPFHNQYFH ISMLDYNARD RALYAWNNGH QVLFNVTLFH IIKTEDDT bmy_15734T0/1-464 DIPFHNQYFH ISMLDYNARD RALYAWNNGH QVLFNVTLFH IIKTEDDT BACU018701/1-478 DIPFHNQYFH ISMLDYNARD RALYAWNNGH QVLFNVTLFH IIKTEDDT