KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:31 2014 Check: 00 .. Name: ENSP00000263245/1-516 Len: 518 Check: 1298 Weight: 1.00 Name: ENSBTAP00000050747/1-517 Len: 518 Check: 7288 Weight: 1.00 Name: ENSTTRP00000014373/1-517 Len: 518 Check: 980 Weight: 1.00 Name: bmy_01039T0/1-273 Len: 518 Check: 853 Weight: 1.00 Name: BACU013440/1-517 Len: 518 Check: 7302 Weight: 1.00 // 1 50 ENSP00000263245/1-516 MGDPSKQDIL TIFKRLRSVP TNKVCFDCGA KNPSWASITY GVFLCIDCSG ENSBTAP00000050747/1-517 MGDPSKQDIL TIFKRLRSVP TNKVCFDCGA KNPSWASITY GVFLCIDCSG ENSTTRP00000014373/1-517 MGDPSKQDIL TIFKRLRSVP TNKVCFDCGA KNPSWASITY GVFLCIDCSG bmy_01039T0/1-273 MGDPSKQDIL TIFRRLRSVP TNKVCFDCGA KNPSWASITY GVFLCIDCSG BACU013440/1-517 MGDPSKQDIL TIFRRLRSVP TNKVCFDCGA KNPSWASITY GVFLCIDCSG 51 100 ENSP00000263245/1-516 SHRSLGVHLS FIRSTELDSN WSWFQLRCMQ VGGNASASSF FHQHGCSTND ENSBTAP00000050747/1-517 SHRSLGVHLS FIRSTELDSN WSWFQLRCMQ VGGNANASSF FHQHGCDTND ENSTTRP00000014373/1-517 SHRSLGVHLS FIRSTELDSN WSWFQLRCMQ VGGNATASSF FHQHGCDTND bmy_01039T0/1-273 SHRSLGVHLS FIRSTELDSN WSWFQLRCMQ VGGNANASSF FHQHGCDTTD BACU013440/1-517 SHRSLGVHLS FIRSTELDSN WSWFQLRCMQ VGGNANASSF FHQHGCDTND 101 150 ENSP00000263245/1-516 TNAKYNSRAA QLYREKIKSL ASQATRKHGT DLWLDSCVVP PLSPPPKEED ENSBTAP00000050747/1-517 TNAKYNSRAA QLYRERIKAL ASQATRKHGT DLWLDSCVVP PSSPPPKEED ENSTTRP00000014373/1-517 TNAKYNSRAA QLYRERIKVL ASQATRKHGT DLWLDSCVVP PLSPPPKEED bmy_01039T0/1-273 TNAKYNSRTA QLYRERIKGL ASQATRKHGT DLWLDSCVVP PLSPPPKEED BACU013440/1-517 TNAKYNSRTA QLYRERIKGL ASQATRKHGT DLWLDSCVVP PLSPPPKEED 151 200 ENSP00000263245/1-516 FFASHVSPEV SDTAWASAIA EPSSLTSRPV ETTLENNEGG QEQGPSVEGL ENSBTAP00000050747/1-517 FFASHASPEV SSTGWASAQP EP-SLTPRNV DAPAASSEGV PEQGPSVEGL ENSTTRP00000014373/1-517 FFASHASPEV SGTGWTSAQP EPSSLTPGNV DAPPANNEGG PEQGPSVEGL bmy_01039T0/1-273 FFASHASPEV SGTGWASAQP GPSSLTPGNV DAPPANDEGG PEQGPSVEGL BACU013440/1-517 FFASHASPEV SGTGWASAEP EPSSLTPGNV DAPPANNEGG PEQGPSVEGL 201 250 ENSP00000263245/1-516 NVPTKATL-E VSSIIKKKPN QAKKGLGAKK GSLGAQKLAN TCFNEIEKQA ENSBTAP00000050747/1-517 NVPTKAAVGE VSSIIKKKPN QAKRGLGAKK GSLGAQKLSN TCFNEIEKQA ENSTTRP00000014373/1-517 NAPTKAAL-E VSSIIKKKPN HAKRGLGAKK GSLGAQKLTN TCFNEIEKQA bmy_01039T0/1-273 NVPTKAALGE VSSIIKKKPN QAKRGLGAKK GSLGAQKLTN TCFNEIEKQA BACU013440/1-517 NVPTKAALGE VSSIIKKKPN QAKRGLGAKK GSLGAQKLTN TCFNEIEKQA 251 300 ENSP00000263245/1-516 QAADKMKEQE D-LAKVVSKE ESIVSSLRLA YKDLEIQMKK DEKMNISGKK ENSBTAP00000050747/1-517 QAVDKMNAQE DLLSRAAPKE ESIVSSLRLA YKDLEIQMKK DEKMNMSGKK ENSTTRP00000014373/1-517 QAVDKMKEQE DLLARAAPKE ESXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_01039T0/1-273 QAVDKMKEQE DLLARAAPNE DSV------- ---------- ---------- BACU013440/1-517 QAVDKMKEQE DLLARAAPNE ESVVSSLRLA YKDLKIEMKK DEKMNMSGKK 301 350 ENSP00000263245/1-516 NVDSDRLGMG FGNCRSVISH SVTSDMQTIE QESPIMAKPR KKYNDDSDDS ENSBTAP00000050747/1-517 KAESERLGMG FGNSRSGISH SVTSDMQTIE QETPITAKPR KKYGDDSDDS ENSTTRP00000014373/1-517 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX KKYSDDSDDL bmy_01039T0/1-273 ---------- ---------- ---------- ---------- ---------- BACU013440/1-517 KVESERLGMG FGNCRSGISH SVTSDLQTIE QETPITAKPR KKYSDDSDDS 351 400 ENSP00000263245/1-516 YFTSSSSYFD EPVELRSSSF SSWDDSSDSY WKKETSKDTE TVLKTTGYSD ENSBTAP00000050747/1-517 YFTSSSRFFD EPMELRSSSF SSWDDSSDSY WKKETIKDTD PIPKNTGYTD ENSTTRP00000014373/1-517 HFTSSSRYFD EPVELRSSSF SSWDDSSDSF WKKETVKDTD IILKTTGYTD bmy_01039T0/1-273 ---------- ---------- ---------- ---------- ---------- BACU013440/1-517 YFASSSRYFD EPVELRSSSF SSWDDSSDSY WKKETIKDTD IILKTTGYTD 401 450 ENSP00000263245/1-516 RPTARRKPDY EPVENTDEAQ KKFGNVKAIS SDMYFGRQSQ ADYETRARLE ENSBTAP00000050747/1-517 RPTTRRKPDS EPAENTDEAQ KKFGNVKAIS SDMYFGRQAK ADYEARARLE ENSTTRP00000014373/1-517 RPTARRKPDY EPVENTDEAQ KKFGNVKAIS SDMYFGRQAK ADYETRARLE bmy_01039T0/1-273 ---------- ---------- ---------- ---------- ---------- BACU013440/1-517 RP-ARCKPDY EPVENTDEAQ KKFGNVKAIS SDMYFGRQAK ADYETRARLE 451 500 ENSP00000263245/1-516 RLSASSSISS ADLFEEPRKQ PAGNYSLSSV LPNAPDMAQF KQGVRSVAGK ENSBTAP00000050747/1-517 RLSASSSISS ADLFDEQRKQ TAGSYNLTSV LPTAPDMAQF KQGVRSVAGK ENSTTRP00000014373/1-517 RLSASSSISS ADLFDEQRKQ TAGNYNLTSM LPTAPDMAQF KQGVRSVAGK bmy_01039T0/1-273 ---------- ---------- ---------- ---------- ---------- BACU013440/1-517 RLSASSSISS ADLFDEQRKQ PAGNYNLTSM LPTAPDMAQF KQGVRSVAGK 501 550 ENSP00000263245/1-516 LSVFANGVVT SIQDRYGS ENSBTAP00000050747/1-517 LSVFANGVMT SIQDRYGS ENSTTRP00000014373/1-517 LSVFANGVMT SIQDRYGS bmy_01039T0/1-273 ---------- -------- BACU013440/1-517 LSVFANGVMT SIQDRYGS