KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:00:32 2014  Check: 00 ..

 Name: ENSP00000248948/1-123     Len:    198  Check:  7290  Weight:  1.00
 Name: ENSBTAP00000050772/1-117  Len:    198  Check:  3089  Weight:  1.00
 Name: ENSTTRP00000001920/1-125  Len:    198  Check:  8743  Weight:  1.00
 Name: bmy_19802T0/1-167         Len:    198  Check:  8014  Weight:  1.00
 Name: BACU017143/1-121          Len:    198  Check:  4557  Weight:  1.00

//


                          1                                                   50
ENSP00000248948/1-123     ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000050772/1-117  ---------- ---------- ---------- ---------- ---------- 
ENSTTRP00000001920/1-125  ---------- ---------- ---------- ---------- ---------- 
bmy_19802T0/1-167         MLTSGKIRSG CWGPAPPSHR VSGLICMPCR GPAASPVCPE APGARPAQAQ 
BACU017143/1-121          ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000248948/1-123     ---------- ---MACRCLS FLLMGTFLSV SQTVLAQLDA LLVFPGQVAQ 
ENSBTAP00000050772/1-117  ---------- ---------- ---------- -QPALTKPEA LLVFPGQVAQ 
ENSTTRP00000001920/1-125  ---------- -LAMAWQHLA LLLTGVLLAA SKQPSTQPDT -MVFPGQVDQ 
bmy_19802T0/1-167         HNKRLPPTSL PLAMACWHLA LLLTGVLLAA SQPTLTQPDT LLVFPGQVAQ 
BACU017143/1-121          ---------- ---MACWHLA LLLTGVLLAA SQPTLTQPDT LLVFPGQVAQ 


                          101                                                150
ENSP00000248948/1-123     LSCTLSPQHV TIRDYGVSWY QQRAGSAPRY LLYYRSEEDH HRPADIPDRF 
ENSBTAP00000050772/1-117  LSCTISPHYA IVGDLGVSWY QQRAGSAPRL LLYYRSEEHQ HRAPGIPDRF 
ENSTTRP00000001920/1-125  LSCMISPRYV TVGDYGVSWY QQRAGSAPRL LLQYRSEEDN HRPPDIPDRF 
bmy_19802T0/1-167         LSCMLSPRHA IVGDYGVSWY QQQAGSAPRL LLHYRSEEDH HRPPDIPDRF 
BACU017143/1-121          LSCMLSPRHA TVGDYGVSWY QQRAGSAPRL LLHYRSEEDH HRPPDIPDRF 


                          151                                                200
ENSP00000248948/1-123     SAAKDEAHNA CVLTISPVQP EDDADYYCSV G--------- ---YGFSP 
ENSBTAP00000050772/1-117  SAAADAAHNT CILTISPVQP EDDADYYCFV EEEAPETLGE GPSLPTSP 
ENSTTRP00000001920/1-125  SAATDAAHNA CILTISPVQP EDAADYYCSV G--------- --LKVTVL 
bmy_19802T0/1-167         SAATDAAHNA CILTISP--- ---------- ---------- -------- 
BACU017143/1-121          SAATDAAHNA CILTISPVQP EDAADYYCSV G--------- -----YIP