KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:33 2014 Check: 00 .. Name: ENSTTRP00000001761/1-651 Len: 690 Check: 1620 Weight: 1.00 Name: BACU003529/1-641 Len: 690 Check: 6672 Weight: 1.00 Name: ENSP00000312262/1-689 Len: 690 Check: 2720 Weight: 1.00 Name: bmy_07824T0/1-569 Len: 690 Check: 1999 Weight: 1.00 Name: ENSBTAP00000050806/1-652 Len: 690 Check: 7630 Weight: 1.00 // 1 50 ENSTTRP00000001761/1-651 ---------- ---------- ---------- --------IR SVMQKYLEDR BACU003529/1-641 ---------- ---------- ---------- -------SIR SVMQKYLEDR ENSP00000312262/1-689 MADLEAVLAD VSYLMAMEKS KATPAARASK KILLPEPSIR SVMQKYLEDR bmy_07824T0/1-569 ---------- ---------- ---------- ---------- --MQKYLEDR ENSBTAP00000050806/1-652 ---------- ---------- ---------- -------SIR SVMQKYLEDR 51 100 ENSTTRP00000001761/1-651 GEVTFEKVFS QKLGYLLFRD FCLKHLEEAK PLVEFYEG-I KKYEKLETEE BACU003529/1-641 GEVTFEKIFS QKLGIV---- --------GP PHGPGTQGRI KKYEKLETEE ENSP00000312262/1-689 GEVTFEKIFS QKLGYLLFRD FCLNHLEEAR PLVEFYEE-I KKYEKLETEE bmy_07824T0/1-569 GEVTFEKIFS QKLGYLLFRD FCLKHLEEAK PLVEFYEG-I KKYEKLETEE ENSBTAP00000050806/1-652 GEVTFEKIFS QKLGYLLFRD FCLKHLEEAK PLVEFYEE-I KKYEKLETEE 101 150 ENSTTRP00000001761/1-651 ERLACSREIF DTYIMKELLA CSHPFSKSAI EHVQGHLAKK QVPPDLFQPY BACU003529/1-641 ERLACSREIF DTYIMKELLA CSHPFSKSAI EHVQGHLVRK QVPPDLFQPY ENSP00000312262/1-689 ERVARSREIF DSYIMKELLA CSHPFSKSAT EHVQGHLGKK QVPPDLFQPY bmy_07824T0/1-569 ERLACSREIF DTYIMKELLA CSHPFSKSAI EHVQGHLVRK QVPPDLFQPY ENSBTAP00000050806/1-652 ERLVCSREIF DTYIMKELLA CSHPFSKSAI EHVQGHLVKK QVPPDLFQPY 151 200 ENSTTRP00000001761/1-651 IEEICQNLRG DVFQKFIESD KFTRFCQWKN VELNIHLTMN DFSVHRIIGR BACU003529/1-641 IEEICQNLRG DVFQKFIESD KFTRFCQWKN VELNIHLTMN DFSVHRIIGR ENSP00000312262/1-689 IEEICQNLRG DVFQKFIESD KFTRFCQWKN VELNIHLTMN DFSVHRIIGR bmy_07824T0/1-569 IEEICQNLRG DVFQKFIESD KFTRFCQWKN VELNIHLTMN DFSVHRIIGR ENSBTAP00000050806/1-652 IEEICQNLRG DVFQKFIESD KFTRFCQWKN VELNIHLTMN DFSVHRIIGR 201 250 ENSTTRP00000001761/1-651 GGFGEVYGCR KADTGKMYAM KCLDKKRIKM KQGETLALNE RIMLSLVSTG BACU003529/1-641 GGFGEVYGCR KADTGKMYAM KCLDKKRIKM KQGETLALNE RIMLSLVSTG ENSP00000312262/1-689 GGFGEVYGCR KADTGKMYAM KCLDKKRIKM KQGETLALNE RIMLSLVSTG bmy_07824T0/1-569 GGFGEVYGCR KADTGKMYAM KCLDKKRIKM KQGETLALNE RIMLSLVSTG ENSBTAP00000050806/1-652 GGFGEVYGCR KADTGKMYAM KCLDKKRIKM KQGETLALNE RIMLSLVSTG 251 300 ENSTTRP00000001761/1-651 DCPFIVCMSY AFHTPDKLSF ILDLMNGGDL HYHLSQHGVF SEADMRFYAA BACU003529/1-641 DCPFIVCMSY AFHTPDKLSF ILDLMNGGDL HYHLSQHGVF SEADMRFYAA ENSP00000312262/1-689 DCPFIVCMSY AFHTPDKLSF ILDLMNGGDL HYHLSQHGVF SEADMRFYAA bmy_07824T0/1-569 DCPFIVCMSY AFHTPDKLSF ILDLMNGGDL HYHLSQHGVF SEADMRFYAA ENSBTAP00000050806/1-652 DCPFIVCMSY AFHTPDKLSF ILDLMNGGDL HYHLSQHGVF SEADMRFYAA 301 350 ENSTTRP00000001761/1-651 EIILGLEHMH NRFVVYRDLK PANILLDEHG HVRISDLGLA CDFSKKKPHA BACU003529/1-641 EIILGLEHMH NRFVVYRDLK PANILLDEHG HVRISDLGLA CDFSKKKPHA ENSP00000312262/1-689 EIILGLEHMH NRFVVYRDLK PANILLDEHG HVRISDLGLA CDFSKKKPHA bmy_07824T0/1-569 EIILGLEHMH NRFVVYRDLK PANILLDEHG HVRISDLGLA CDFSKKKPHA ENSBTAP00000050806/1-652 EIILGLEHMH NRFVVYRDLK PANILLDEHG HVRISDLGLA CDFSKKKPHA 351 400 ENSTTRP00000001761/1-651 SVGTHGYMAP EVLQKGVAYD SSADWFSLGC MLFKLLRGHS PFRQHKTKDK BACU003529/1-641 SVGTHGYMAP EVLQKGVAYD SSADWFSLGC MLFKLLRGHS PFRQHKTKDK ENSP00000312262/1-689 SVGTHGYMAP EVLQKGVAYD SSADWFSLGC MLFKLLRGHS PFRQHKTKDK bmy_07824T0/1-569 SVGTHGYMAP EVLQKGVAYD SSADWFSLGC MLFKLLRGHS PFRQHKTKDK ENSBTAP00000050806/1-652 SVGTHGYMAP EVLQKGVAYD SSADWFSLGC MLFKLLRGHS PFRQHKTKDK 401 450 ENSTTRP00000001761/1-651 HEIDRMTLTM AVELPDSFSP ELRSLLEGLL QRDVNRRLGC LGRGAQEVKE BACU003529/1-641 HEIDRMTLTM AVELPDSFST ELRSLLEGLL QRDVNRRLGC LGRGAQEVKE ENSP00000312262/1-689 HEIDRMTLTM AVELPDSFSP ELRSLLEGLL QRDVNRRLGC LGRGAQEVKE bmy_07824T0/1-569 HEIDRMTLTM AVELPDSFSP ELRSLLEGLL QRDVNRRLGC LGRGAQEVKE ENSBTAP00000050806/1-652 HEIDRMTLTM AVELPDSFSP ELRSLLEGLL QRDVNRRLGC LGRGAQEVKE 451 500 ENSTTRP00000001761/1-651 SPFFRSLDWQ MVFLQKYXXX XXXXXXXXXX XXXXXXXXXX XXXXKGIKLL BACU003529/1-641 SPFFRSLDWQ MVFLQKYPPP LMPPRGEVNA ADAFDIGSFD EEDTKGIKLL ENSP00000312262/1-689 SPFFRSLDWQ MVFLQKYPPP LIPPRGEVNA ADAFDIGSFD EEDTKGIKLL bmy_07824T0/1-569 SPFFRSLDWQ MVFLQKYPPP LMPPRGEVNA ADAFDIGSFD EEDTKGIK-- ENSBTAP00000050806/1-652 SPFFRSLDWQ MVFLQKYPPP LIPPRGEVNA ADAFDIGSFD EEDTKGIKLL 501 550 ENSTTRP00000001761/1-651 DSDQELYRNF PLTISERWQQ EVAETVFDTI NAETDRLEAR KKTKNKQLGH BACU003529/1-641 DSDQELYRNF PLTISERWQQ EVAETVFDTI NVETDRLEAR KKTKNKQLGH ENSP00000312262/1-689 DSDQELYRNF PLTISERWQQ EVAETVFDTI NAETDRLEAR KKAKNKQLGH bmy_07824T0/1-569 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050806/1-652 DSDQELYRNF PLTISERWQQ EVAETVFDTI NAETDRLEAR KKTKNKQLGH 551 600 ENSTTRP00000001761/1-651 EEDYALGKDC IMHGYMSKMG NPFLTQWQRR YFYLFPNRLE WRGEGEAPQS BACU003529/1-641 EEDYALGKDC IMHGYMSKMG NPFLTQWQRR YFYLFPNRLE WRGEGEAPQS ENSP00000312262/1-689 EEDYALGKDC IMHGYMSKMG NPFLTQWQRR YFYLFPNRLE WRGEGEAPQS bmy_07824T0/1-569 ---------- ---------- ------WQRR YFYLFPNRLE WRGEGEAPQS ENSBTAP00000050806/1-652 EEDYALGKDC IMHGYMSKMG NPFLTQWQRR YFYLFPNRLE WRGEGEAPQS 601 650 ENSTTRP00000001761/1-651 LLTMEEIQSV EETQIKERKC LLLKIRGGKQ FVLQCDSDPE LVQWKKELRD BACU003529/1-641 LLTMEEIQSV EETQIKERKC LLLKIRGGKQ FVLQCDSDPE LVQWKKELRD ENSP00000312262/1-689 LLTMEEIQSV EETQIKERKC LLLKIRGGKQ FILQCDSDPE LVQWKKELRD bmy_07824T0/1-569 LLTMEEIQSV EETQIKERKC LLLKIRGGKQ FVLQCDSDPE LVQWKKELRD ENSBTAP00000050806/1-652 LLTMEEIQSV EETQIKERKC LLLKIRGGKQ FVLQCDSDPE LVQWKKELRD 651 700 ENSTTRP00000001761/1-651 AYREAQQLVQ RVPKMKNKPR SPVVELSKVP LVQRGSANGL BACU003529/1-641 AYREAQQLVQ RVPKMKNKPR SPVVELSKVP LVQRGSANGL ENSP00000312262/1-689 AYREAQQLVQ RVPKMKNKPR SPVVELSKVP LVQRGSANGL bmy_07824T0/1-569 AYREAQQLVQ RVPKMKNKPR SPVVELSKVP LVQRGSANGL ENSBTAP00000050806/1-652 AYREAQQLVQ RVPKMKNKPR SPVVELSKVP LIQRGSANGL